Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00568 | ATGTTGGAAAATTACAATGCATTGAGAAGCCATTTGATGGATTGTATCAACAAAAACTCAGACAAGGAACTCAGCCCGGTGAAGAAAAGAAAATCAGAAAGCAGTAACAACAACATCAGCAATACCCTAGGAGCTGACGCAAATTCCGACACAAGCTCATGCGAGGAGGGTTCGTGCAAGAAACCAAGAGAAGAAACGATCAAATCCAAAATTACGAAAACTTATTACAAGACCGAACCTTCTGATACAAGCCTCGTTGTGAAAGATGGGTATCAATGGAGGAAATATGGGCAAAAAGTGACCAGGGATAATCCTTGTCCTAGAGCTTATTTTAGATGCTCTTTCGCTCCTACATGTCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAGTCTGTTTTGGTTGCAACTTACGAAGGAGAACATAACCATCCGAACTCCGGCCAGGAGGTAAACTCAGCCTCAACTCGACGAGCCACTGCTGGTATCTGGTGGAGCAGATGGCATCTTCTCTGA | 519 | 43.55 | MLENYNALRSHLMDCINKNSDKELSPVKKRKSESSNNNISNTLGADANSDTSSCEEGSCKKPREETIKSKITKTYYKTEPSDTSLVVKDGYQWRKYGQKVTRDNPCPRAYFRCSFAPTCPVKKKVQRSVEDQSVLVATYEGEHNHPNSGQEVNSASTRRATAGIWWSRWHLL | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 9895955 | 9896838 | - | Bda010396.1 | Bda12g00568 | 17583 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00568 | 172 | MobiDBLite | consensus disorder prediction | 31 | 55 | - | - | |
Bda12g00568 | 172 | MobiDBLite | consensus disorder prediction | 23 | 59 | - | - | |
Bda12g00568 | 172 | Pfam | WRKY DNA -binding domain | 88 | 146 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda12g00568 | 172 | Gene3D | WRKY domain | 71 | 147 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda12g00568 | 172 | SMART | WRKY_cls | 87 | 147 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda12g00568 | 172 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 3 | 159 | IPR044810 | GO:0003700 | |
Bda12g00568 | 172 | ProSiteProfiles | WRKY domain profile. | 82 | 148 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda12g00568 | 172 | SUPERFAMILY | WRKY DNA-binding domain | 84 | 146 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda12g00568 | 172 | PANTHER | TRANSCRIPTION FACTOR | 3 | 159 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda12g00568 | Bda-Chr12:9895955 | Bda05g00712 | Bda-Chr5:55382542 | 8.71E-28 | dispersed | |
Bda12g00568 | Bda-Chr12:9895955 | Bda04g00793 | Bda-Chr4:57824886 | 7.46E-60 | wgd | |
Bda12g00568 | Bda-Chr12:9895955 | Bda05g00494 | Bda-Chr5:51733979 | 4.62E-89 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16784 | PF03106 | WRKY | 9.90E-24 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00568 | - | - | qsu:111983152 | 236.498 |