Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00569 ATGCCAACCGACAGCTCATCATTTGCCGGAAAAAAAGTTTGCGTCACCGGTGCAGGAGGGTTCATTGCGTCTTGGATCGTGAAGCTCCTCCTCGAAAGAGGTTATATTGTTCGGGGAACTGTCAGAAATCCAGATGATCCTAAGAATGTACATCTAAAAGAACTTGAAGGAGCCAAGGACAGATTAACTTTGCACAAAGCTGATCTTCTCGATTACGAGAGCCTTAAAAATGCTATCGCAGGTTGTGACGGTGTGTTCCATACGGCCTCGCCGATGACGGACGATCCAGAACAAATGCTTGGACCTGCTATTAATGGTTCCAAATATGTGATCGCCGCAGCTGCGGAAACAAACGTACAGCGTGTAGTGTTCACATCATCGATTGGTGCAGTGTACATGGACCCTAATCGGAGCTCCGACGTAGTCGTCGATGAAACTTGCTGGAGTGATCTCGAGTTTTGCCAAAACACCAAGAATTGGTATTGTTATGGAAAAACAGTGGCAGAAAAAGCAGCATGGGAAGAGGCAAAGAAGAGAGGGGTAGATCTACTGGTGATGAATCCAGTGTTAGTAATTGGACCGTTGCTTCAATCCACCATTAATGCAAGCACAATGCATATTCTCAAGTACTTAACTGGCTCAGCCAAGACATTTGCCAATTCCATTCAAGGGTATGTTCATGTGAAAGATGCAGCTTTGGCCCACATTATCGTCTTCGAGACTCCGTCCGCCTTGGGTCGTTACCTTTGTGCCGAAAGCATACTTCACCGAGAGGAAGTGGTCGGCATTCTAGCCAAGCTCTTTCCGGAATATCCCATCCCTCTTAAGTGCTCGGACGAGGTGAATCCGAGGAAGAAGCCATACAAGTTCTCTAATCAAAAGCTTAAAGATTTAGGTCTGGAGTTCACACCAGCAAAACATTGCTTATATGACGCAGTGAAGAGCTTACAAGAGAAGGGGCATCTCCCTCTTCCTTGA 978 46.32 MPTDSSSFAGKKVCVTGAGGFIASWIVKLLLERGYIVRGTVRNPDDPKNVHLKELEGAKDRLTLHKADLLDYESLKNAIAGCDGVFHTASPMTDDPEQMLGPAINGSKYVIAAAAETNVQRVVFTSSIGAVYMDPNRSSDVVVDETCWSDLEFCQNTKNWYCYGKTVAEKAAWEEAKKRGVDLLVMNPVLVIGPLLQSTINASTMHILKYLTGSAKTFANSIQGYVHVKDAALAHIIVFETPSALGRYLCAESILHREEVVGILAKLFPEYPIPLKCSDEVNPRKKPYKFSNQKLKDLGLEFTPAKHCLYDAVKSLQEKGHLPLP 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10312540 10314373 + Bda010399.1 Bda12g00569 17584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00569 325 Gene3D - 3 325 - -
Bda12g00569 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 317 IPR036291 -
Bda12g00569 325 CDD FR_SDR_e 13 300 - -
Bda12g00569 325 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Bda12g00569 325 PANTHER CINNAMOYL-COA REDUCTASE 9 323 - -
Bda12g00569 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00510 Bda-Chr12:7477394 Bda12g00569 Bda-Chr12:10312540 1.10E-31 dispersed
Bda12g00569 Bda-Chr12:10312540 Bda08g01271 Bda-Chr8:51845930 4.52E-72 dispersed
Bda10g00707 Bda-Chr10:41411208 Bda12g00569 Bda-Chr12:10312540 6.08E-75 transposed
Bda13g00730 Bda-Chr13:8792231 Bda12g00569 Bda-Chr12:10312540 1.34E-06 transposed
Bda12g00569 Bda-Chr12:10312540 Bda03g01229 Bda-Chr3:16197590 4.62E-55 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00569 K09753 - tcc:18595421 541.962