Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00695 ATGAAAGTCAGAATTCTTCTAGATGTAGCTCCCTATGCAGTTTTTCCAGTTATGAGTGAGCTAGAGATTGAAATAGCAGAGGGAACATATTTGCAGCAAAGTCAAGTAAAAATCATGGGCGCTAGCGCTGATAGCCAAAATCAAGGAAGAACAGTGGTGGATATTAACCTTGTTCCACTAGGAGAAAAATTTGATAACACTACCGCAGTACTAACATATGAGCGATTTTGGCATAAAAAAGTGCACCTGAACACAACTCTTTTTGGTAATTATGAAGTGATGTACATCACTTACCCAGGCATTCCTTCTTCACCTCAAAATGGAAACTACACGGGAAACGGTCCGAGCGGAAGCACTGGAGATCTCCCTATTACTGCAAATTTTGTGAACAAAAACCAGAGGATGAATATTAGAACCATTGCTATAATTGCTTTGTCAGCGTTTGTTCTCTTATTGGTTATTGTTGGAGCTATTTCAATTTTTTTCAAATGGCGGAAGGTGGGAAGACCATCTAGTGCTGTTGGTCCTGCGTTTACTCCATCTATAAACAAAAGACCAGGTAAGTTTATATATTGTATTGGGTCTGTTTTGTCGAGTAGTATTGAAAGCTCTGCTTCGATGTCCCTCATTTCCACAATGGCTACTACTATTCTATCTGTTAAAACATTTACTCTTGCTGAGCTTGACAAAGCAACTGATAAATTCAGTTCAAATAGAATATTAGGAGAAGGAGGATTTGGGCGTGTTTACTGTGGAAATATTGAAGATGGAACTGAAGTTGCAGTTAAGTTGCTTACACGGGATAATCAGAATGGAGACCGTGAATTTATTGCAGAGGTTGAGATGTTAAGCCGATTGCACCACCGTAATCTTGTGAAACTGATTGGTATATGCATTGAGGGTCGCACACGCTGCTTAGTCTATGAACTAGTGCATAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAAAAAGAAGGGACCTCTTGATTGGGATACACGGTTGAAGATTGCACTTGGAGCAGCAAGGGGGCTGGCATATCTTCATGAAGATTCTAACCCTCGAGTGATTCACCGGGATTTCAAAGCAAGTAATGTTTTACTAGAAGTTGACTTTACCCCAAAAGTATCCGACTTTGGATTGGCAAGGGAAGCTACTGAAGGAAGTCAGCATATTTCAACACGGGTCATGGGAACTTTTGGGTACGTGGCTCCTGAATATGCCATGACGGGTCATCTACTTGTTAAAAGTGATGTTTATAGTTATGGAGTAGTGCTACTTGAGCTTCTTTCTGGAAGAAAACCTGTGGACATGTCTCAACCTCCGGGACAAGAGAACTTAGTAACTTGGGCTCGACCATTATTGACCAGCAGAGAAGGTTTGGAGCGACTGGTAGATCCTTCCTTGGCCAGCTATGATTTTGATGACATGGCTAAGGTGGCAGCCATTGCTTCTATGTGCGTTCACCCTGAGGTGACACACAGACCATTTATGGGAGAAGTCGTGCAGGCCCTTAAGCTAATATACAATGACAGTGAAGAGACTTGTGCGGATTGCTACAGTCAGAAAGAGTCGTCCGCGAGAGATTCTGACTTTAAAGGTGATCTAGTGCCTTCGGATAGCAGTTGGTGGAATGCAGGGGGCCTCACCCCTCGACTGACTTATGGGCAAGCCTCATCCTTTATCACGATGGAGTACAGCTCTGGCCCACTCGAAGAAATGGACAACAGACCATTTTCAGCTTCAAGTTTGGTCGGGGATGGTGTATCTTTACCGATCAGGCATGGGAACAGATCTGGTCCGTTGAGAACGATTCGGAGCAAACCCAGTTTCTATCGATTGTCGGGAAGTAGGAGCGAGCATGGGGGACTTCTTTCGAGACGAGTTTGGAACGACGGTTTCTGGGTTTGA 1914 43.52 MKVRILLDVAPYAVFPVMSELEIEIAEGTYLQQSQVKIMGASADSQNQGRTVVDINLVPLGEKFDNTTAVLTYERFWHKKVHLNTTLFGNYEVMYITYPGIPSSPQNGNYTGNGPSGSTGDLPITANFVNKNQRMNIRTIAIIALSAFVLLLVIVGAISIFFKWRKVGRPSSAVGPAFTPSINKRPGKFIYCIGSVLSSSIESSASMSLISTMATTILSVKTFTLAELDKATDKFSSNRILGEGGFGRVYCGNIEDGTEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGVDKKKGPLDWDTRLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPPGQENLVTWARPLLTSREGLERLVDPSLASYDFDDMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDSEETCADCYSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMDNRPFSASSLVGDGVSLPIRHGNRSGPLRTIRSKPSFYRLSGSRSEHGGLLSRRVWNDGFWV 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 33589751 33592330 - Bda009134.1 Bda12g00695 17710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00695 637 CDD STKc_IRAK 241 509 - -
Bda12g00695 637 ProSitePatterns Protein kinases ATP-binding region signature. 241 263 IPR017441 GO:0005524
Bda12g00695 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Bda12g00695 637 SUPERFAMILY Protein kinase-like (PK-like) 214 508 IPR011009 -
Bda12g00695 637 Gene3D Phosphorylase Kinase; domain 1 207 310 - -
Bda12g00695 637 Gene3D Transferase(Phosphotransferase) domain 1 311 533 - -
Bda12g00695 637 Pfam Protein tyrosine and serine/threonine kinase 238 506 IPR001245 GO:0004672|GO:0006468
Bda12g00695 637 ProSiteProfiles Protein kinase domain profile. 235 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00695 637 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 1 634 - -
Bda12g00695 637 PANTHER OS01G0750732 PROTEIN 1 634 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00757 Bda-Chr1:34821946 Bda12g00695 Bda-Chr12:33589751 7.58E-86 dispersed
Bda09g01087 Bda-Chr9:41402778 Bda12g00695 Bda-Chr12:33589751 0 dispersed
Bda11g01254 Bda-Chr11:13159469 Bda12g00695 Bda-Chr12:33589751 4.38E-89 dispersed
Bda12g00695 Bda-Chr12:33589751 Bda07g01515 Bda-Chr7:28206869 3.80E-101 dispersed
Bda12g00695 Bda-Chr12:33589751 Bda11g01113 Bda-Chr11:11007129 9.21E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69970 PF07714 PK_Tyr_Ser-Thr 4.00E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00695 - - csv:101203278 1100.89