Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00712 ATGGAATCGAAAACCCATTTGTTCGTTTGTTCAATCACCTTCCTCTGCTCTGTACTTTCCCTCCATGCCTACCCTCTTCAAACCTACATTGTTCAGCTTCACCCCAGAGGAGAAACCAGCTCTTTATTCTCCTCGAAATTTCAATGGCATCTCTCATTTCTTCAACGAACTCTTTCCGCTGAAGTAGACCCTTCTTCTCGCTTTCTCTACTCCTACAGAACCGCCATCGAAGGATTTGCAGCTCAGCTTTCTGAAAATGAGCTTCAATACTTGCAGACCTTGCCTGATGTCGTGGCGATAAAGCACGACAGGAGACTGCAAATTTACACCACTTATTCTTACAAGTTCTTAGGACTTGATTTAGGCACGGAAGGTGCTTGGCAAAAGTCCTCATTCGGCCATGGAACTATAATTGGCATGCTTGACACAGGAGTTTGGCCGGAAAGTCCAAGCTTCAACGATCACAATATGCCTCCCCCGCCGAGAAGATGGAGAGGAGTTTGCCAAGAAGGGCAAGGCTTCAATTCATCCAACTGTAACAGAAAACTGATCGGAGCTAGATTCTTCACCAAAGGCCATAGAGTTGCTTCAATATCATCATCCCCCGATTCGTTACATGAATATATTTCCCCAAGAGATGCTCATGGCCATGGCACTCACACGTCATCGACTGCCGGAGGAGCTCCGGTGCCGATGGCCAGCGTGCTCGGAAACGGGGCCGGAGTGGCTCGAGGGATGGCCCCTGACTCGCACATTGCTGTGTATAAAGTTTGCTGGTTTGGCGGCTGTTATAGCTCTGATATCATGGCAGCCATTGATGTGGCCATAAGTGATGGAGTTGATATTCTCTCCCTCTCTTTAGGCGGATTTCCTATCCCGCTTTTCGATGACACCATTGCCATTGCGAGTTTTCAAGCCATGCGCAGCGGGATTTCAGTTATTTGCGCAGCCGGAAATAATGGACCCACTCAAAGCTCTGTCGCTAATGTTGCTCCTTGGATCACCACCGTCGGTGCGAGTACTCTCGACCGAAGATTTCCGGCCTTGGTTAAAATGGGTAATGGAGAATTCCTCTATGGAGAATCTATGTATCCGGGTGTAAGGCTAAGAAGCCATGGCCGAGAGCTTGAGCTTGTTTATGTGGCTCAAGGGAACATAGGGAGTCAATATTGCTTAAAAGGGTCGCTTCCTAGAGAAAGGGTTCGCGGAAAAATGGTCATTTGCGACCGAGGGGTAAATGGCAGATCCGAAAAAGGTCAAATTGTGAAGGAAGCCGGAGGAGCAGCCATGATTTTAGCAAATACAGAGATGAATCTCGAGGAAGATTCAGTTGATGTTCATGTCCTTCCTGCAACGTTAATTGGTTTTCGAGAATCCGAACGAATAAAAGCCTATATCAACTCGACAAGAAATCCCCGAGCTTGGATTCATTTCGGAGGAACCATGATTGGTGGATCAAGAGCTCCTGCAGTGGCTCAGTTTTCAGCCAGAGGGCCAAGTCTTTCAAATCCTGCAACTCTTAAACCTGACATGGTTGCTCCTGGCGTAAACATCATCGCCGCTTGGCCTCAAAATTTGGGCCCTTCCGGCCTTCCACAAGATGATCGGAGAGTGAACTTCACAGTTATGTCTGGAACATCAATGGCTTGCCCTCATGTCTCCGGTATAACTGCTTTGATTCGCTCTGCCCACCCTCTGTGGTCTCCGGCAGCCGTTAAATCTGCAATCATGACAACTTCAGATGCTAATGATCATCTGGGAAGACCAATTCTCGACGGAAACAAACCAGCTGAAGTTTTTGCAATTGGGGCCGGACATGTCAATCCCGCCAGAGCGATTGATCCCGGATTGATCTACGACATAATGCCGGACGAGTATATAACTCATCTCTGCAGTATTCGATACACCAAAACCGAAATTCTCACAATCACACACCAGAATGTGAGCTGCACTGACATCTTACAGAAGAACAGAGGTTTCAGCCTAAATTATCCATCGATTTCCGTCATTTTCAGGCGAGGAAAGACGAGCAAGATGATTAAACGAAGAATGACAAATGTGGGGACTCCGAATTCCACATACTCAGTGGAAGTAGTGGCTCCACATGGAGTCAGGGTGAGAGTCAAACCTCAAAAGCTAATCTTCAGAAACATAAACCAGAGCTTGACTTATAAAGTACTGTTTATATCAAGCAAGAGATCAAATTCAGGAAGTGTGAGCTTAGGAGAAGGTCATTTGGCTTGGCACCACTCTCAGAACAGCAATTACAGAGTCAGAAGCCCCATTTCAGTTACTTGGAAGTAG 2304 46.96 MESKTHLFVCSITFLCSVLSLHAYPLQTYIVQLHPRGETSSLFSSKFQWHLSFLQRTLSAEVDPSSRFLYSYRTAIEGFAAQLSENELQYLQTLPDVVAIKHDRRLQIYTTYSYKFLGLDLGTEGAWQKSSFGHGTIIGMLDTGVWPESPSFNDHNMPPPPRRWRGVCQEGQGFNSSNCNRKLIGARFFTKGHRVASISSSPDSLHEYISPRDAHGHGTHTSSTAGGAPVPMASVLGNGAGVARGMAPDSHIAVYKVCWFGGCYSSDIMAAIDVAISDGVDILSLSLGGFPIPLFDDTIAIASFQAMRSGISVICAAGNNGPTQSSVANVAPWITTVGASTLDRRFPALVKMGNGEFLYGESMYPGVRLRSHGRELELVYVAQGNIGSQYCLKGSLPRERVRGKMVICDRGVNGRSEKGQIVKEAGGAAMILANTEMNLEEDSVDVHVLPATLIGFRESERIKAYINSTRNPRAWIHFGGTMIGGSRAPAVAQFSARGPSLSNPATLKPDMVAPGVNIIAAWPQNLGPSGLPQDDRRVNFTVMSGTSMACPHVSGITALIRSAHPLWSPAAVKSAIMTTSDANDHLGRPILDGNKPAEVFAIGAGHVNPARAIDPGLIYDIMPDEYITHLCSIRYTKTEILTITHQNVSCTDILQKNRGFSLNYPSISVIFRRGKTSKMIKRRMTNVGTPNSTYSVEVVAPHGVRVRVKPQKLIFRNINQSLTYKVLFISSKRSNSGSVSLGEGHLAWHHSQNSNYRVRSPISVTWK 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 34073655 34075958 - Bda009156.1 Bda12g00712 17727

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00712 767 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 23 765 - -
Bda12g00712 767 Gene3D - 630 766 - -
Bda12g00712 767 CDD Peptidases_S8_3 106 581 IPR034197 -
Bda12g00712 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Bda12g00712 767 SUPERFAMILY PA domain 371 440 IPR046450 -
Bda12g00712 767 CDD PA_subtilisin_like 350 474 - -
Bda12g00712 767 Pfam Peptidase inhibitor I9 28 108 IPR010259 -
Bda12g00712 767 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Bda12g00712 767 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Bda12g00712 767 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Bda12g00712 767 Gene3D Peptidase S8/S53 domain 135 626 IPR036852 GO:0004252|GO:0006508
Bda12g00712 767 ProSiteProfiles Serine proteases, subtilase domain profile. 111 613 - -
Bda12g00712 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 109 IPR037045 -
Bda12g00712 767 SUPERFAMILY Subtilisin-like 109 617 IPR036852 GO:0004252|GO:0006508
Bda12g00712 767 Pfam PA domain 377 461 IPR003137 -
Bda12g00712 767 Pfam Subtilase family 133 591 IPR000209 GO:0006508|GO:0008236
Bda12g00712 767 Pfam Fibronectin type-III domain 662 764 IPR041469 -
Bda12g00712 767 Gene3D - 343 484 - -
Bda12g00712 767 MobiDBLite consensus disorder prediction 209 228 - -
Bda12g00712 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 765 IPR045051 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00712 - - - pvy:116127252 1157.51
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00075 Bda-Chr9:1422336 Bda12g00712 Bda-Chr12:34073655 0 dispersed
Bda12g00712 Bda-Chr12:34073655 Bda10g00887 Bda-Chr10:43336039 0 dispersed
Bda12g00712 Bda-Chr12:34073655 Bda02g00365 Bda-Chr2:44053097 0 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda12g00712 . 1 767 Subtilisin-like Serine Gene Family AT1G04110 67.4 3.7e-311 1063.9
Bda01g00472 . 5 729 Subtilisin-like Serine Gene Family AT1G20150 52.8 3.8e-207 718.4
Bda01g00472 . 2 475 Subtilisin-like Serine Gene Family AT1G20160 56.6 4.8e-140 495.0
Bda07g00866 . 15 765 Subtilisin-like Serine Gene Family AT1G30600 67.8 6.1e-304 1040.0
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT1G32940 55.3 1.2e-226 783.1
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT1G32950 54.3 9.5e-221 763.5
Bda06g01090 . 25 769 Subtilisin-like Serine Gene Family AT1G32960 55.6 1.6e-237 819.3
Bda06g01090 . 24 769 Subtilisin-like Serine Gene Family AT1G32970 50.5 2.9e-201 698.7
Bda01g01763 . 36 771 Subtilisin-like Serine Gene Family AT2G04160 56.3 3.3e-243 838.2
Bda07g00820 . 3 644 Subtilisin-like Serine Gene Family AT2G04160 59.5 2.3e-225 778.9
Bda02g00365 . 23 761 Subtilisin-like Serine Gene Family AT2G05920 69.9 1.2e-306 1048.9
Bda02g00348 . 23 761 Subtilisin-like Serine Gene Family AT2G05920 69.9 1.6e-306 1048.5
Bda01g01993 . 19 757 Subtilisin-like Serine Gene Family AT2G05920 68.2 1.1e-288 989.2
Bda11g01464 . 26 761 Subtilisin-like Serine Gene Family AT2G05920 56.6 1.6e-231 799.3
Bda08g01361 . 25 760 Subtilisin-like Serine Gene Family AT2G05920 54.5 6.5e-220 760.8
Bda07g01841 . 27 778 Subtilisin-like Serine Gene Family AT2G05920 50.4 1.3e-212 736.5
Bda05g00622 . 27 777 Subtilisin-like Serine Gene Family AT2G05920 51.5 7.2e-203 704.1
Bda01g01594 . 35 764 Subtilisin-like Serine Gene Family AT2G05920 52.4 2.1e-202 702.6
Bda10g00887 . 25 776 Subtilisin-like Serine Gene Family AT2G05920 51.0 8.2e-199 690.6
Bda13g00001 . 6 618 Subtilisin-like Serine Gene Family AT2G05920 51.3 1.3e-175 613.6
Bda10g00876 . 1 522 Subtilisin-like Serine Gene Family AT2G05920 55.9 5.8e-160 561.6
Bda01g01898 . 20 819 Subtilisin-like Serine Gene Family AT2G19170 82.3 0.0e+00 1349.7
Bda11g00106 . 6 819 Subtilisin-like Serine Gene Family AT2G19170 81.5 0.0e+00 1349.0
Bda11g01464 . 7 761 Subtilisin-like Serine Gene Family AT3G14067 53.0 1.4e-222 769.6
Bda02g00348 . 27 761 Subtilisin-like Serine Gene Family AT3G14067 53.6 1.6e-218 756.1
Bda02g00365 . 27 761 Subtilisin-like Serine Gene Family AT3G14067 53.6 2.1e-218 755.7
Bda10g00876 . 1 529 Subtilisin-like Serine Gene Family AT3G14067 69.0 6.0e-213 737.6
Bda01g01993 . 21 755 Subtilisin-like Serine Gene Family AT3G14067 54.0 6.7e-212 734.2
Bda08g01361 . 27 760 Subtilisin-like Serine Gene Family AT3G14067 51.8 6.9e-209 724.2
Bda10g00887 . 1 782 Subtilisin-like Serine Gene Family AT3G14067 51.3 4.5e-200 694.9
Bda05g00622 . 24 783 Subtilisin-like Serine Gene Family AT3G14067 50.7 3.6e-197 685.3
Bda13g00001 . 3 617 Subtilisin-like Serine Gene Family AT3G14067 51.3 1.0e-164 577.4
Bda10g00887 . 24 784 Subtilisin-like Serine Gene Family AT3G14240 76.2 0.0e+00 1180.2
Bda05g00622 . 33 785 Subtilisin-like Serine Gene Family AT3G14240 74.3 0.0e+00 1147.1
Bda11g01464 . 28 757 Subtilisin-like Serine Gene Family AT3G14240 53.2 6.6e-220 760.8
Bda02g00365 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 50.9 2.8e-210 728.8
Bda02g00348 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 50.7 1.4e-209 726.5
Bda01g01993 . 22 751 Subtilisin-like Serine Gene Family AT3G14240 51.7 1.5e-208 723.0
Bda08g01361 . 28 756 Subtilisin-like Serine Gene Family AT3G14240 51.1 2.2e-207 719.2
Bda07g01841 . 31 782 Subtilisin-like Serine Gene Family AT3G14240 50.2 2.9e-207 718.8
Bda01g01594 . 38 760 Subtilisin-like Serine Gene Family AT3G14240 50.5 1.1e-203 706.8
Bda13g00001 . 3 618 Subtilisin-like Serine Gene Family AT3G14240 59.2 1.3e-202 703.4
Bda10g00876 . 1 520 Subtilisin-like Serine Gene Family AT3G14240 51.9 3.7e-146 515.8
Bda06g00103 . 2 444 Subtilisin-like Serine Gene Family AT4G00230 50.7 1.7e-138 490.0
Bda09g00063 . 11 391 Subtilisin-like Serine Gene Family AT4G00230 50.3 1.5e-94 344.0
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT4G10510 54.3 2.7e-223 771.9
Bda06g01090 . 22 769 Subtilisin-like Serine Gene Family AT4G10520 54.9 4.8e-231 797.7
Bda06g01090 . 22 769 Subtilisin-like Serine Gene Family AT4G10530 52.9 3.2e-219 758.4
Bda06g01090 . 24 769 Subtilisin-like Serine Gene Family AT4G10540 54.1 2.8e-234 808.5
Bda06g01090 . 52 769 Subtilisin-like Serine Gene Family AT4G10550 53.3 6.6e-222 767.3
Bda07g00866 . 13 765 Subtilisin-like Serine Gene Family AT4G20430 71.8 0.0e+00 1102.0
Bda01g01751 . 1 285 Subtilisin-like Serine Gene Family AT4G21320 75.9 9.6e-132 466.5
Bda06g01090 . 26 764 Subtilisin-like Serine Gene Family AT4G21630 52.1 1.2e-205 713.4
Bda06g01090 . 26 764 Subtilisin-like Serine Gene Family AT4G21650 52.1 9.5e-211 730.3
Bda01g01898 . 7 819 Subtilisin-like Serine Gene Family AT4G30020 81.2 0.0e+00 1352.4
Bda11g00106 . 6 819 Subtilisin-like Serine Gene Family AT4G30020 80.9 0.0e+00 1345.9
Bda13g00001 . 1 623 Subtilisin-like Serine Gene Family AT4G34980 74.4 1.3e-276 949.1
Bda05g00622 . 28 785 Subtilisin-like Serine Gene Family AT4G34980 54.3 4.2e-227 784.6
Bda10g00887 . 14 784 Subtilisin-like Serine Gene Family AT4G34980 52.8 9.4e-227 783.5
Bda11g01464 . 22 757 Subtilisin-like Serine Gene Family AT4G34980 51.1 3.7e-207 718.4
Bda02g00348 . 25 757 Subtilisin-like Serine Gene Family AT4G34980 50.1 2.1e-202 702.6
Bda02g00365 . 25 757 Subtilisin-like Serine Gene Family AT4G34980 50.1 2.8e-202 702.2
Bda10g00876 . 1 520 Subtilisin-like Serine Gene Family AT4G34980 53.2 6.0e-149 525.0
Bda09g00063 . 28 390 Subtilisin-like Serine Gene Family AT5G03620 53.5 4.5e-104 375.6
Bda09g01152 . 274 1005 Subtilisin-like Serine Gene Family AT5G19660 79.6 0.0e+00 1223.4
Bda07g00866 . 12 541 Subtilisin-like Serine Gene Family AT5G44530 72.3 9.1e-236 813.1
Bda09g00832 . 1 627 Subtilisin-like Serine Gene Family AT5G45640 51.9 1.6e-173 606.7
Bda09g00832 . 1 629 Subtilisin-like Serine Gene Family AT5G45650 57.7 8.9e-204 707.2
Bda07g01841 . 23 782 Subtilisin-like Serine Gene Family AT5G51750 69.9 0.0e+00 1105.1
Bda11g01464 . 26 761 Subtilisin-like Serine Gene Family AT5G51750 52.7 7.6e-224 773.9
Bda08g01361 . 9 760 Subtilisin-like Serine Gene Family AT5G51750 51.3 2.7e-221 765.4
Bda02g00348 . 23 761 Subtilisin-like Serine Gene Family AT5G51750 50.3 2.4e-217 752.3
Bda02g00365 . 23 761 Subtilisin-like Serine Gene Family AT5G51750 50.3 3.1e-217 751.9
Bda13g00001 . 3 623 Subtilisin-like Serine Gene Family AT5G51750 50.9 5.0e-175 611.7
Bda09g00063 . 25 562 Subtilisin-like Serine Gene Family AT5G59190 50.2 6.5e-142 501.5
Bda01g01763 . 23 774 Subtilisin-like Serine Gene Family AT5G59810 63.6 1.8e-281 965.3
Bda07g00820 . 1 647 Subtilisin-like Serine Gene Family AT5G59810 68.0 8.3e-263 903.3
Bda11g01464 . 7 762 Subtilisin-like Serine Gene Family AT5G67360 71.9 0.0e+00 1097.0
Bda08g01361 . 10 761 Subtilisin-like Serine Gene Family AT5G67360 66.7 9.8e-293 1002.7
Bda01g01594 . 17 765 Subtilisin-like Serine Gene Family AT5G67360 61.8 5.4e-267 917.1
Bda02g00365 . 15 762 Subtilisin-like Serine Gene Family AT5G67360 56.2 1.7e-228 789.3
Bda02g00348 . 15 762 Subtilisin-like Serine Gene Family AT5G67360 56.2 2.2e-228 788.9
Bda07g01841 . 25 778 Subtilisin-like Serine Gene Family AT5G67360 54.7 2.9e-228 788.5
Bda01g01993 . 22 755 Subtilisin-like Serine Gene Family AT5G67360 56.8 7.9e-226 780.4
Bda10g00887 . 18 779 Subtilisin-like Serine Gene Family AT5G67360 51.4 4.4e-208 721.5
Bda05g00622 . 25 780 Subtilisin-like Serine Gene Family AT5G67360 50.3 1.1e-203 706.8
Bda14g01267 . 1 527 Subtilisin-like Serine Gene Family AT5G67360 53.4 1.3e-199 693.3
Bda13g00001 . 4 618 Subtilisin-like Serine Gene Family AT5G67360 54.7 7.0e-182 634.4
Bda10g00876 . 1 522 Subtilisin-like Serine Gene Family AT5G67360 53.7 1.2e-149 527.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009243 1 1 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 2 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda12g00712 Bda_Chr12 FPKM 0.0 0.0 2.41111 0.913368 0.0 3.56829 0.0 0.0 0.0