Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00776 ATGATTTGTTTTCGTTCCTTATTCAGAAAAAGGCTTCATTCACCAGAACGAAGATTTGATGTTGGTGAAGAATTATCGGGCATCCGTGGCATTAAATTTTACACATACAAAGAGCTAAGGAATGCAACCGAAGACTTTAGTCCGATAAATAAAATTGGGGAGGGTGGTTATGGCTCTGTCTATAAGGCAAAGTTAAAGCACGGGGAAATTGCAGCCGTGAAAATTCTATCCGCTGAATCGAGGCAAGGGGTTAAAGAATTTTTGACAGAAGTTACTGTCATCACAGAGATACGGCATGAGAATTTGGTCGAGCTCTTTGGCTGTTGCGTGGAGGGAAATCACAGAATCCTCGTCTACAACTACCTCGAAAACAACAGCCTTGCTCAAACTCTTCTCGGGAAAGACAACAAAAATGTGGACTTCAACTGGCGGACGAGGTCTAATATTTGCATCGGAATTGCACGGGGGCTTGCCTTTCTTCACGAGGAAGTACGCCCACATGTCATTCACAGAGACATCAAAGCAAGTAATATTCTGCTCGACGCCAACTTATTGCCTAAAATTTCGGATTTTGGTCTTGCAAAACTTATCCCGCCAAGTGTGTCTCACATAAGCACACGAGTTGCGGGAACAATTGGATATCTAGCACCTGAGTATGCGATAAGAGGACAAGTGACCAGAAAGTCAGCTATTTACAGTTTCGGTGTTCTCCTCGTGGAAATTGTCAGTGGAAGGTGTCACACAAATATGCATCTCCCGGTAGGCGAGCAGTACCTTCTAGAAAGGGCATGGGATCTTTTCGAGCGCAAAGAGCTAGTTGATTTGGTAGATACATCGTTAGATGGAAAGTTCGATGTCATGGAGGCTTGTCGATATCTAAAGATCGGTCTTCTTTGCACCCAAGACAGTCCGAAGCTCCGGCCAAAGATGTCAACTGTCATAAAGATGCTAAAAGGATATATCGAGGTTGACGACAATTCGATAACACAGCCCGGGTTAATTTCAGATTTGATGGATTTTAAAGGTCCAGAACCGAGCAAAAAGAAGCCGAATAAATCGAACTATTCTTCTTACGAAGACGTTTCTTCTGGGTCCGAAAATCCTGACAGCTATACCTTGTCGTCCGAAAACTCTACCGTTCCGACTTCGAGTTTTACCGCAAAATACAAATCGAGTTTTTGA 1182 43.4 MICFRSLFRKRLHSPERRFDVGEELSGIRGIKFYTYKELRNATEDFSPINKIGEGGYGSVYKAKLKHGEIAAVKILSAESRQGVKEFLTEVTVITEIRHENLVELFGCCVEGNHRILVYNYLENNSLAQTLLGKDNKNVDFNWRTRSNICIGIARGLAFLHEEVRPHVIHRDIKASNILLDANLLPKISDFGLAKLIPPSVSHISTRVAGTIGYLAPEYAIRGQVTRKSAIYSFGVLLVEIVSGRCHTNMHLPVGEQYLLERAWDLFERKELVDLVDTSLDGKFDVMEACRYLKIGLLCTQDSPKLRPKMSTVIKMLKGYIEVDDNSITQPGLISDLMDFKGPEPSKKKPNKSNYSSYEDVSSGSENPDSYTLSSENSTVPTSSFTAKYKSSF 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 36466749 36469876 - Bda009271.1 Bda12g00776 17791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00776 393 SUPERFAMILY Protein kinase-like (PK-like) 23 317 IPR011009 -
Bda12g00776 393 MobiDBLite consensus disorder prediction 349 393 - -
Bda12g00776 393 Gene3D Phosphorylase Kinase; domain 1 20 121 - -
Bda12g00776 393 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 368 - -
Bda12g00776 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Bda12g00776 393 Pfam Protein kinase domain 48 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00776 393 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 2 368 - -
Bda12g00776 393 MobiDBLite consensus disorder prediction 339 393 - -
Bda12g00776 393 SMART serkin_6 46 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00776 393 ProSiteProfiles Protein kinase domain profile. 46 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00776 393 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Bda12g00776 393 CDD STKc_IRAK 52 319 - -
Bda12g00776 393 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00933 Bda-Chr5:57893860 Bda12g00776 Bda-Chr12:36466749 2.29E-113 dispersed
Bda12g00776 Bda-Chr12:36466749 Bda12g00820 Bda-Chr12:37630529 4.34E-162 dispersed
Bda12g00776 Bda-Chr12:36466749 Bda12g00813 Bda-Chr12:37532606 6.14E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69972 PF00069 Pkinase 1.20E-44 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00776 - - zju:107423327 545.043