Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00804 ATGGAGGATGAGGTGATTCTTTTGGATTTCTGGCCCAGCCCTTTTGGGATGAGGTTGAGGGTTGCTTTGGCTGAGAAGGGTATCGAGTATGAGTACAAGGAGGATGATTTGAGGAACAAGAGCCCTCTTCTTCTTCAGATGAACCCGATTCACAAGAAGATTCCGGTTCTCATTCACAATGGGAAGCCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGCTTCCGGCGGACCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTCGACAAGAAGGTATTTGAGCTAGGGAAGAAGTTGTGGCTGACAAAAGAAGAAGAACTAGAAACAGCCAAGGCTCAATATCTAGAGTGCTTGAAGGCACTCGAGACCGAGCTTGGAGACAAACTGTTCTTCGGAGGGGAGAGTTTCGGCTATGTCGATGTGGCGTTCATTCCGTATTACACGTGGTTTTCAGGCTACGAGATGTTCGGGAAGTTCAGGACGGAGGAGGAATGTCCTAAACTCATGGCTTGGGTTAAGAGATGCTTGGAGAAAGAGAGTGTTTCAAAGGCTCTCCCTGATCAAGCAAAGGTTTATGGCTTTATTTTGAAGTTTTCTGGGGCAGAGTAG 651 47.62 MEDEVILLDFWPSPFGMRLRVALAEKGIEYEYKEDDLRNKSPLLLQMNPIHKKIPVLIHNGKPVCESLIAVQYIDEVWPEKSPLLPADPFLRSQARFWADYVDKKVFELGKKLWLTKEEELETAKAQYLECLKALETELGDKLFFGGESFGYVDVAFIPYYTWFSGYEMFGKFRTEEECPKLMAWVKRCLEKESVSKALPDQAKVYGFILKFSGAE 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 37100499 37101757 + Bda009309.1 Bda12g00804 17819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00804 216 Pfam Glutathione S-transferase, C-terminal domain 119 188 - -
Bda12g00804 216 Coils Coil 118 138 - -
Bda12g00804 216 CDD GST_N_Tau 5 78 - -
Bda12g00804 216 Gene3D Glutaredoxin 1 87 - -
Bda12g00804 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Bda12g00804 216 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Bda12g00804 216 Gene3D - 88 215 - -
Bda12g00804 216 SFLD Main.3: Omega- and Tau-like 2 211 IPR045073 -
Bda12g00804 216 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 212 - -
Bda12g00804 216 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Bda12g00804 216 SUPERFAMILY GST C-terminal domain-like 76 212 IPR036282 -
Bda12g00804 216 SFLD Main (cytGST) 2 211 - -
Bda12g00804 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 212 IPR045073 -
Bda12g00804 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Bda12g00804 216 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00804 Bda-Chr12:37100499 Bda12g00808 Bda-Chr12:37256720 8.01E-129 dispersed
Bda12g00804 Bda-Chr12:37100499 Bda12g00805 Bda-Chr12:37130995 1.40E-120 tandem
Bda12g00804 Bda-Chr12:37100499 Bda05g00801 Bda-Chr5:56458421 5.35E-125 wgd
Bda12g00804 Bda-Chr12:37100499 Bda05g00801 Bda-Chr5:56458421 5.35E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00804 K00799 - cpap:110812529 341.658