Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00805 ATGACGGATGAGGTGGTTCTTTTGGATTTCTGGCCCAGCCCTTTTGGGATGAGGTTGAGGGTCACTTTGGCTGAGAAGGGTATCGAGTATGAGTACAAGGAGGAGGATTTGTGGAACAAGAGCCCTCTTCTTCTTCAAACGAACCCGATTCACAAGAAGATTCCGGTTCTCATTCACAATGGGAAGTCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGCTTCCGACAGATCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTCGACAAGAAGATGTGGGTGTATGAGAATGAACAGATTTACGAGCTGGGGAAGAAGCTATGGACGACAAAAGGAGAAGAAAAAGAAACGGAAAAGGCGGAATATCTAGAGTGCTTGAAGGCACTTGAAACTGAGCTAGGAGACAAACCCTTCTTCGGAGGGGAGTGTTTTGGATACGTCGACGTGGTGTTCATTCCGTTCTACTGGTGGTTTTTGGTCTACGAGACGCACGGAAAGTTCACGACGGAGGAAGAATGTCCTAAACTCGTGGCTTGGGGCAAGAGATGCTTGGAGAAAGAGAGCGTTTCAAAGTCTCTTCCTGAGCAGGAGAAGGTGATTCTTTTGGATTTCTGGCCCAGCCCTTTTGGGATGAGGTTGAGGGTTGCTTTGGCTGAGAAGGGTATCGAGTATGAGTTGAGGGAGGAGGATTTGAGCAATAAAAGCCCTCTTCTTCTTCAGATGAACCCGGTTCACAAGAAGATTCCGGTTCTCATTCACAATGGGAAGCCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGTTTCCGGCGGACCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTGGACAAGAAGGTATATGAGCTAGGGAAGAAGTTGTGGCTGACAAAAGGAGAAGAACTAGAAACAGCCAAGGCTCAATATCTAGAGTTCTTGAAGGCTCTCGAGGCCGAGCTTGGAGACAAACCGTTCTTTGGAGGGGAGAGTTTCGGCTACGTTGACGTGGCATTCATTCCGCATTACACGTGGTTTTCAGGCTACGAGATGTTCGGGAAGTTCAGGACGGAGGAGGAATGTCCTAAACTCATGGCTTGGGTCAAGAGATGCTTGGAGAAAGACAGTGTTTCAAAGGCTCTCCCTGATCAAGCAAAGGTTTATGGCTTTATTTTGAAGTATTCTGGGGTAGAGTAG 1275 47.92 MTDEVVLLDFWPSPFGMRLRVTLAEKGIEYEYKEEDLWNKSPLLLQTNPIHKKIPVLIHNGKSVCESLIAVQYIDEVWPEKSPLLPTDPFLRSQARFWADYVDKKMWVYENEQIYELGKKLWTTKGEEKETEKAEYLECLKALETELGDKPFFGGECFGYVDVVFIPFYWWFLVYETHGKFTTEEECPKLVAWGKRCLEKESVSKSLPEQEKVILLDFWPSPFGMRLRVALAEKGIEYELREEDLSNKSPLLLQMNPVHKKIPVLIHNGKPVCESLIAVQYIDEVWPEKSPLFPADPFLRSQARFWADYVDKKVYELGKKLWLTKGEELETAKAQYLEFLKALEAELGDKPFFGGESFGYVDVAFIPHYTWFSGYEMFGKFRTEEECPKLMAWVKRCLEKDSVSKALPDQAKVYGFILKYSGVE 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 37130995 37137165 - Bda009311.4 Bda12g00805 17820

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00805 424 CDD GST_N_Tau 213 286 - -
Bda12g00805 424 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Bda12g00805 424 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 212 420 - -
Bda12g00805 424 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 213 - -
Bda12g00805 424 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 296 416 IPR010987 -
Bda12g00805 424 CDD GST_N_Tau 5 78 - -
Bda12g00805 424 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Bda12g00805 424 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 212 420 IPR045073 -
Bda12g00805 424 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
Bda12g00805 424 Pfam Glutathione S-transferase, C-terminal domain 329 396 - -
Bda12g00805 424 Pfam Glutathione S-transferase, C-terminal domain 134 193 - -
Bda12g00805 424 Gene3D Glutaredoxin 1 87 - -
Bda12g00805 424 Gene3D Glutaredoxin 214 295 - -
Bda12g00805 424 SUPERFAMILY Thioredoxin-like 212 314 IPR036249 -
Bda12g00805 424 CDD GST_C_Tau 297 420 IPR045074 GO:0004364|GO:0006749
Bda12g00805 424 Gene3D - 88 213 - -
Bda12g00805 424 Gene3D - 296 424 - -
Bda12g00805 424 SFLD Main.3: Omega- and Tau-like 210 420 IPR045073 -
Bda12g00805 424 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Bda12g00805 424 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Bda12g00805 424 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Bda12g00805 424 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Bda12g00805 424 Pfam Glutathione S-transferase, N-terminal domain 212 284 IPR004045 -
Bda12g00805 424 SFLD Main (cytGST) 210 420 - -
Bda12g00805 424 SFLD Glutathione Transferase (cytosolic) 2 213 IPR040079 -
Bda12g00805 424 SUPERFAMILY GST C-terminal domain-like 284 420 IPR036282 -
Bda12g00805 424 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 223 IPR010987 -
Bda12g00805 424 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 211 290 IPR004045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00805 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - cpap:110812529 347.051
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00799 Bda-Chr3:6775962 Bda12g00805 Bda-Chr12:37130995 5.27E-98 dispersed
Bda05g00801 Bda-Chr5:56458421 Bda12g00805 Bda-Chr12:37130995 4.32E-114 dispersed
Bda12g00805 Bda-Chr12:37130995 Bda12g00808 Bda-Chr12:37256720 3.45E-123 dispersed
Bda12g00804 Bda-Chr12:37100499 Bda12g00805 Bda-Chr12:37130995 1.40E-120 tandem
Bda12g00805 Bda-Chr12:37130995 Bda12g00806 Bda-Chr12:37180057 2.29E-111 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda04g00604 . 1 209 Glutathione S-transferase Gene Family AT4G02520 56.6 2.7e-62 235.3
Bda04g00604 . 1 210 Glutathione S-transferase Gene Family AT2G02930 56.3 1.2e-62 236.5
Bda04g00604 . 5 206 Glutathione S-transferase Gene Family AT1G02950 53.7 1.8e-57 219.5
Bda04g00604 . 1 210 Glutathione S-transferase Gene Family AT1G02930 54.8 2.1e-59 225.7
Bda04g00604 . 1 210 Glutathione S-transferase Gene Family AT1G02920 54.3 5.5e-60 227.6
Bda04g00604 . 1 213 Glutathione S-transferase Gene Family AT2G47730 57.5 8.4e-66 247.3
Bda07g01101 . 1 212 Glutathione S-transferase Gene Family AT3G03190 58.0 3.2e-71 265.0
Bda07g01101 . 1 214 Glutathione S-transferase Gene Family AT5G17220 59.3 1.7e-72 269.2
Bda01g00194 . 19 232 Glutathione S-transferase Gene Family AT3G09270 58.6 3.0e-72 268.5
Bda01g00187 . 3 213 Glutathione S-transferase Gene Family AT3G09270 59.0 3.9e-72 268.1
Bda03g00799 . 200 410 Glutathione S-transferase Gene Family AT3G09270 58.0 6.3e-70 260.8
Bda05g00801 . 2 222 Glutathione S-transferase Gene Family AT1G78380 65.2 5.2e-85 310.8
Bda12g00808 BCT 1 211 Glutathione S-transferase Gene Family AT1G78380 67.3 1.1e-84 309.7
Bda12g00804 . 1 209 Glutathione S-transferase Gene Family AT1G78380 66.5 2.0e-84 308.9
Bda12g00805 . 211 417 Glutathione S-transferase Gene Family AT1G78380 66.2 7.4e-84 307.0
Bda12g00806 . 1 231 Glutathione S-transferase Gene Family AT1G78380 59.7 3.8e-80 294.7
Bda12g00805 . 214 420 Glutathione S-transferase Gene Family AT1G78370 64.7 1.0e-80 296.6
Bda05g00801 . 2 220 Glutathione S-transferase Gene Family AT1G78370 62.1 3.2e-79 291.6
Bda12g00808 BCT 1 211 Glutathione S-transferase Gene Family AT1G78370 62.6 2.1e-78 288.9
Bda12g00804 . 6 212 Glutathione S-transferase Gene Family AT1G78370 62.8 2.7e-78 288.5
Bda12g00806 . 1 231 Glutathione S-transferase Gene Family AT1G78370 56.7 4.8e-75 277.7
Bda12g00804 . 1 211 Glutathione S-transferase Gene Family AT1G78340 64.5 5.3e-82 300.8
Bda05g00801 . 2 222 Glutathione S-transferase Gene Family AT1G78340 61.5 1.7e-80 295.8
Bda12g00808 BCT 1 208 Glutathione S-transferase Gene Family AT1G78340 64.4 1.7e-80 295.8
Bda12g00805 . 211 419 Glutathione S-transferase Gene Family AT1G78340 62.7 2.5e-79 292.0
Bda12g00806 . 1 230 Glutathione S-transferase Gene Family AT1G78340 58.3 1.5e-76 282.7
Bda12g00804 . 1 205 Glutathione S-transferase Gene Family AT1G78320 53.2 3.6e-58 221.5
Bda12g00805 . 210 413 Glutathione S-transferase Gene Family AT1G78320 53.4 8.1e-58 220.3
Bda12g00808 BCT 1 212 Glutathione S-transferase Gene Family AT1G78320 50.9 3.1e-57 218.4
Bda05g00801 . 2 220 Glutathione S-transferase Gene Family AT1G78320 50.2 8.9e-57 216.9
Bda05g00801 . 2 225 Glutathione S-transferase Gene Family AT1G17180 63.4 1.4e-85 312.8
Bda12g00804 . 1 209 Glutathione S-transferase Gene Family AT1G17180 63.2 6.4e-83 303.9
Bda12g00808 BCT 1 211 Glutathione S-transferase Gene Family AT1G17180 63.0 1.8e-82 302.4
Bda12g00805 . 1 214 Glutathione S-transferase Gene Family AT1G17180 61.7 3.2e-82 301.6
Bda12g00806 . 1 234 Glutathione S-transferase Gene Family AT1G17180 56.8 4.3e-79 291.2
Bda12g00804 . 2 215 Glutathione S-transferase Gene Family AT1G17190 58.3 1.6e-73 272.7
Bda12g00808 BCT 3 209 Glutathione S-transferase Gene Family AT1G17190 57.5 1.3e-72 269.6
Bda12g00805 . 210 417 Glutathione S-transferase Gene Family AT1G17190 56.3 2.9e-72 268.5
Bda05g00801 . 4 223 Glutathione S-transferase Gene Family AT1G17190 55.0 3.8e-72 268.1
Bda12g00806 . 3 230 Glutathione S-transferase Gene Family AT1G17190 51.3 5.2e-69 257.7
Bda12g00804 . 2 211 Glutathione S-transferase Gene Family AT3G43800 52.3 6.1e-65 244.2
Bda12g00805 . 209 419 Glutathione S-transferase Gene Family AT3G43800 50.7 2.6e-63 238.8
Bda12g00808 BCT 3 211 Glutathione S-transferase Gene Family AT3G43800 53.5 9.8e-63 236.9
Bda05g00801 . 4 220 Glutathione S-transferase Gene Family AT3G43800 50.2 2.7e-60 228.8
Bda05g00801 . 5 225 Glutathione S-transferase Gene Family AT1G53680 55.4 9.7e-71 263.5
Bda12g00805 . 209 419 Glutathione S-transferase Gene Family AT1G53680 58.2 2.8e-70 261.9
Bda12g00804 . 2 211 Glutathione S-transferase Gene Family AT1G53680 56.6 1.5e-68 256.1
Bda12g00808 BCT 4 205 Glutathione S-transferase Gene Family AT1G53680 60.8 2.6e-68 255.4
Bda12g00806 . 4 234 Glutathione S-transferase Gene Family AT1G53680 53.4 8.5e-67 250.4
Bda11g00278 . 16 154 Glutathione S-transferase Gene Family AT2G02380 51.8 1.4e-37 153.3
Bda08g00522 . 1 244 Glutathione S-transferase Gene Family AT5G41210 67.6 7.3e-96 347.1
Bda08g00522 . 1 244 Glutathione S-transferase Gene Family AT5G41240 67.2 4.8e-93 339.0
Bda15g00189 . 247 426 Glutathione S-transferase Gene Family AT5G02780 59.9 2.6e-58 222.2
Bda05g01248 . 2 142 Glutathione S-transferase Gene Family AT5G02780 58.7 4.9e-41 164.9
Bda15g00189 . 247 428 Glutathione S-transferase Gene Family AT3G55040 65.0 1.0e-64 243.8
Bda05g01248 . 1 147 Glutathione S-transferase Gene Family AT3G55040 56.8 7.2e-42 167.9
Bda15g00189 . 247 430 Glutathione S-transferase Gene Family AT5G02790 62.7 3.7e-65 245.0
Bda05g01248 . 1 143 Glutathione S-transferase Gene Family AT5G02790 57.6 2.2e-41 166.0
Bda15g00369 . 1 211 Glutathione S-transferase Gene Family AT1G19570 65.6 3.6e-83 304.7
Bda14g00316 . 1 211 Glutathione S-transferase Gene Family AT1G19570 66.5 2.3e-82 302.0
Bda01g01146 . 6 187 Glutathione S-transferase Gene Family AT1G19570 59.6 1.3e-61 233.0
Bda15g00369 . 1 211 Glutathione S-transferase Gene Family AT1G75270 69.8 1.7e-85 312.4
Bda14g00316 . 1 212 Glutathione S-transferase Gene Family AT1G75270 69.0 6.5e-85 310.5
Bda01g01146 . 6 187 Glutathione S-transferase Gene Family AT1G75270 59.6 1.2e-62 236.5
Bda01g01146 . 2 185 Glutathione S-transferase Gene Family AT5G16710 76.6 1.2e-85 313.2
Bda15g00369 . 3 210 Glutathione S-transferase Gene Family AT5G16710 59.6 1.2e-72 270.0
Bda14g00316 . 3 210 Glutathione S-transferase Gene Family AT5G16710 55.3 6.7e-68 254.2
Bda01g00677 . 1 268 Glutathione S-transferase Gene Family AT1G77290 66.9 3.3e-102 368.2
Bda06g00110 . 1 260 Glutathione S-transferase Gene Family AT1G77290 62.8 1.9e-94 342.4
Bda06g00111 . 1 260 Glutathione S-transferase Gene Family AT1G77290 62.8 1.9e-94 342.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000291 5 5 16 3 3 4 0 3 4 5 2 4 5 4 5 5 4 4 3 4 3 8 4 5 5 8 2 4 1 17 145
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda12g00805 Bda_Chr12 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0