Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00805 ATGACGGATGAGGTGGTTCTTTTGGATTTCTGGCCCAGCCCTTTTGGGATGAGGTTGAGGGTCACTTTGGCTGAGAAGGGTATCGAGTATGAGTACAAGGAGGAGGATTTGTGGAACAAGAGCCCTCTTCTTCTTCAAACGAACCCGATTCACAAGAAGATTCCGGTTCTCATTCACAATGGGAAGTCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGCTTCCGACAGATCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTCGACAAGAAGATGTGGGTGTATGAGAATGAACAGATTTACGAGCTGGGGAAGAAGCTATGGACGACAAAAGGAGAAGAAAAAGAAACGGAAAAGGCGGAATATCTAGAGTGCTTGAAGGCACTTGAAACTGAGCTAGGAGACAAACCCTTCTTCGGAGGGGAGTGTTTTGGATACGTCGACGTGGTGTTCATTCCGTTCTACTGGTGGTTTTTGGTCTACGAGACGCACGGAAAGTTCACGACGGAGGAAGAATGTCCTAAACTCGTGGCTTGGGGCAAGAGATGCTTGGAGAAAGAGAGCGTTTCAAAGTCTCTTCCTGAGCAGGAGAAGGTGATTCTTTTGGATTTCTGGCCCAGCCCTTTTGGGATGAGGTTGAGGGTTGCTTTGGCTGAGAAGGGTATCGAGTATGAGTTGAGGGAGGAGGATTTGAGCAATAAAAGCCCTCTTCTTCTTCAGATGAACCCGGTTCACAAGAAGATTCCGGTTCTCATTCACAATGGGAAGCCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGTTTCCGGCGGACCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTGGACAAGAAGGTATATGAGCTAGGGAAGAAGTTGTGGCTGACAAAAGGAGAAGAACTAGAAACAGCCAAGGCTCAATATCTAGAGTTCTTGAAGGCTCTCGAGGCCGAGCTTGGAGACAAACCGTTCTTTGGAGGGGAGAGTTTCGGCTACGTTGACGTGGCATTCATTCCGCATTACACGTGGTTTTCAGGCTACGAGATGTTCGGGAAGTTCAGGACGGAGGAGGAATGTCCTAAACTCATGGCTTGGGTCAAGAGATGCTTGGAGAAAGACAGTGTTTCAAAGGCTCTCCCTGATCAAGCAAAGGTTTATGGCTTTATTTTGAAGTATTCTGGGGTAGAGTAG 1275 47.92 MTDEVVLLDFWPSPFGMRLRVTLAEKGIEYEYKEEDLWNKSPLLLQTNPIHKKIPVLIHNGKSVCESLIAVQYIDEVWPEKSPLLPTDPFLRSQARFWADYVDKKMWVYENEQIYELGKKLWTTKGEEKETEKAEYLECLKALETELGDKPFFGGECFGYVDVVFIPFYWWFLVYETHGKFTTEEECPKLVAWGKRCLEKESVSKSLPEQEKVILLDFWPSPFGMRLRVALAEKGIEYELREEDLSNKSPLLLQMNPVHKKIPVLIHNGKPVCESLIAVQYIDEVWPEKSPLFPADPFLRSQARFWADYVDKKVYELGKKLWLTKGEELETAKAQYLEFLKALEAELGDKPFFGGESFGYVDVAFIPHYTWFSGYEMFGKFRTEEECPKLMAWVKRCLEKDSVSKALPDQAKVYGFILKYSGVE 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 37130995 37137165 - Bda009311.4 Bda12g00805 17820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00805 424 CDD GST_N_Tau 213 286 - -
Bda12g00805 424 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Bda12g00805 424 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 212 420 - -
Bda12g00805 424 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 213 - -
Bda12g00805 424 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 296 416 IPR010987 -
Bda12g00805 424 CDD GST_N_Tau 5 78 - -
Bda12g00805 424 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Bda12g00805 424 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 212 420 IPR045073 -
Bda12g00805 424 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
Bda12g00805 424 Pfam Glutathione S-transferase, C-terminal domain 329 396 - -
Bda12g00805 424 Pfam Glutathione S-transferase, C-terminal domain 134 193 - -
Bda12g00805 424 Gene3D Glutaredoxin 1 87 - -
Bda12g00805 424 Gene3D Glutaredoxin 214 295 - -
Bda12g00805 424 SUPERFAMILY Thioredoxin-like 212 314 IPR036249 -
Bda12g00805 424 CDD GST_C_Tau 297 420 IPR045074 GO:0004364|GO:0006749
Bda12g00805 424 Gene3D - 88 213 - -
Bda12g00805 424 Gene3D - 296 424 - -
Bda12g00805 424 SFLD Main.3: Omega- and Tau-like 210 420 IPR045073 -
Bda12g00805 424 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Bda12g00805 424 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Bda12g00805 424 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Bda12g00805 424 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Bda12g00805 424 Pfam Glutathione S-transferase, N-terminal domain 212 284 IPR004045 -
Bda12g00805 424 SFLD Main (cytGST) 210 420 - -
Bda12g00805 424 SFLD Glutathione Transferase (cytosolic) 2 213 IPR040079 -
Bda12g00805 424 SUPERFAMILY GST C-terminal domain-like 284 420 IPR036282 -
Bda12g00805 424 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 223 IPR010987 -
Bda12g00805 424 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 211 290 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00799 Bda-Chr3:6775962 Bda12g00805 Bda-Chr12:37130995 5.27E-98 dispersed
Bda05g00801 Bda-Chr5:56458421 Bda12g00805 Bda-Chr12:37130995 4.32E-114 dispersed
Bda12g00805 Bda-Chr12:37130995 Bda12g00808 Bda-Chr12:37256720 3.45E-123 dispersed
Bda12g00804 Bda-Chr12:37100499 Bda12g00805 Bda-Chr12:37130995 1.40E-120 tandem
Bda12g00805 Bda-Chr12:37130995 Bda12g00806 Bda-Chr12:37180057 2.29E-111 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00805 K00799 - cpap:110812529 347.051