Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00813 ATGGGGTTTGTGTTTTCAGATTTCAGAATCGTTAATGTTCTGGTGTTTGGATGCTATGTTTTGAGTTGCTTCCGTAGTTTTGGATACGGTGATAAACTTCTGCCTCAAGAAGAAGTTGAAGCCCTTCAAGCAATATCTTCAAAGTTGAAGAATGTGAATTGGACAATCACCCGAAGTTCCTGCATTAGTTATGAAGGATTTTTTAATAGGGTGATTGATGGCAACAAAATAATAAGGAATGTCACATGCAGTTGTCCTTCCACTGTTTGTCATGTTACAGCAATCTGGATGAAGGGTATCAATTTAGCTGGTATTTTACCAAAAGAATTTGGCAACCTCACGCATCTGCAGGATCTCGATCTTAGTCGAAACTATTTAAGCGGATCAATTCCAACAAGTTTTGCTCAAATCCCTCTTGTCAAGTTTTCCATCTTAGGTAACCAGATTAGTGGCACAATTCCTACCGAAATTGGGGATATGGCTTCACTTGAGGAACTGGTTTTGGAAGACAACGAACTCTCTGGAAATCTTCCTGATAGCCTTGGAAAGCTGAGTCGCTTGAGGAGACTACTTCTATCTTCTAACAATTTCACAGGAGTAATTCCTGAATCATATGAAAATTTGACGAACTTAACTGATTTTAGGATAGATGGAAGTAGACTAACAGGGAAGATACCTCAATTTATAGGAAACTGGACCAAGATAATGAGACTGGATTTGCAAGGAACGTCAATGGATAATCCCATTCCTTCTACAATTTCGCTTTTGACCGAGATGGAATATTTGCGGATCACTGATTTGAATGGACCTTTTATAAATTTCCCGAATTTGACTGGAATGGTAAAAGTTCAAGAACTGGTCCTGAGAAACTGTCGCATCAATGATACTATTCCAAACGACATTGGAATAATGAAAAAACTAAAAGTCTTAGACTTGAGCTTCAACAAGTTGACTGGTCCAATTCCCAGCACACTTCAGAATCTGTTAGGCAACATTAATTACATCTTTTTGACCAACAACTCACTCAGTGGGGAAGTGCCCAGTTGGACGTCGAGTAACACTCTTAACATAGATTTGTCTTACAACAATTTTACTGGAGCAATGCAATCTAGTTGCCAAATGTCAGCTCCGAATTTAGTTTCCAGCTATTTACCATCAGCAAACCAAGAAGTAACTTGGTGCTTAAAGAAGGATCTTCCATGCTCTGGAAAGGCTGAACATCATTCTCTGTTTATCAATTGTGGAGGAGGAACAATAGAAATTGATGGTAACATATATGAAGAGGACTTGTTTGCTCAAGGTCAATCAAACTTTTATTCGGTTGGAGAAAGGTGGGGTTATAGCAGTACAGGGATTTTCATGGGTAATAAGTCTGCTCCTAACTTAGCAGACAATTCATTTGGTCTGAATGTGAGTGGTCCAAGCTTCTACGAGACTGCTCGACTCTCCCCCTTGTCGCTTAATTACTACGGCCTCTGTCTTCGAAAGGGAAGCTACAATGTCAAGCTGCATTTTGCTGAAATAATGTATTCGGATGACCAGACATTTAGTAGTTTGGGGAGGCGTATATTTGATGTCTCAGTTCAAGGAAATTTAGTTTTAAAGGATTTTAATATTGCGGAGAGAGCTGGGGGAGTTGGTAAGGACTTCACTTACGAGAATAAAAATGTTTTCGTTAATGGTAGCACTCTAGAGATCCACTTATACTGGGCGGGTAAAGGAACTACTGCTATTCCAGACAGAGGAGTTTATGGCCCTCTTATATCTGCGATCACAGTAACACCAAACTATGTTGTTGAGACTGGAGGTTTATCCGCAGGAGCTATTGCTGGTATTGTAATTGCTTCATGTGTGCTAGTTATATTGGTACTTGTAGTCCTCCGAATCAAAGGTTACATATGTGCAAAAGAGACTGTAGACAGTGAATTACGCGGCCTAGAATTGCAAACAGGCTATTTCTCTTTGAGACAAATTAAATCTGCTACAGGCAATTTTGATCCTAAAAATAAGATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGAGTCCTTTTAGATGGATCTTTAATTGCCGTTAAGCAACTTTCCTCGAAATCGAAGCAAGGGAATCGTGAATTTGTCACTGAAATTGGCATGATATCGGCTTTGCAGCACCCAAATCTTGTTAAGCTTTATGGATGTTGCATTGAAGGACAACAATTATTGTTAGTATATGAATACATGGAAAATAATAGTCTTGCTCGTGCTCTCTTTGGTTCTGCGGAACACCGGCTCCACTTAGATTGGGCAGCAAGGAAGAAGATATGCATGGGCATAGCAAGGGGATTAGCTTATCTTCACGAGGAATCAAGGTTGAAAATTGTACACAGAGATATAAAGGCCACAAATGTGCTGCTTGATAAAAATCTAACAGCAAAGATCTCTGACTTTGGTTTGGCTAAGCTTGATGAAGAGGAGAATACCCACATAAGCACTCGGATTGCTGGAACCATAGGCTACATGGCTCCTGAATATGCAATGAGGGGTTACTTAACTGACAAAGCAGATGTCTACAGCTTTGGTGTTGTGGCCTTGGAGATTGTAAGTGGAAAAAGCAACACAAATTATAGGCCAAAGGAAGATTTTGTTTATCTCCTTGATTGGGCATACGTCCTGCAGGAGCAAGGCAATCTTCTCGAACTCGTTGATCCGAGCCTTGGTTCAAACTACTCAAAGCAAGGGGCGATGAGGATGCTCAATTTGGCTCTCTTATGCACCAATCCATCTCCCACTCTCAGACCACCCATGTCCTCTGTAGTGAGCATGCTGGACGGCAAACTTGCAGTCCAAGCACCCCTAGTCAAACGCACGATGGATCAGGACGCAAGATTTAAGGCCTTTGAGAAGCTTTCACAAGACAGCCAAACTTCGGTCTCCTCAATACCTCAAGACAGCCTTGCTCAGAAAAGCACGTTGGTGGACTGGCCTTGGATCGATTCCTCAGTGTCTGTTGAAAGTATACATGAGACCAGTGATTGTTCTTCATCAAGTAAGCTCCTTTAG 3042 41.09 MGFVFSDFRIVNVLVFGCYVLSCFRSFGYGDKLLPQEEVEALQAISSKLKNVNWTITRSSCISYEGFFNRVIDGNKIIRNVTCSCPSTVCHVTAIWMKGINLAGILPKEFGNLTHLQDLDLSRNYLSGSIPTSFAQIPLVKFSILGNQISGTIPTEIGDMASLEELVLEDNELSGNLPDSLGKLSRLRRLLLSSNNFTGVIPESYENLTNLTDFRIDGSRLTGKIPQFIGNWTKIMRLDLQGTSMDNPIPSTISLLTEMEYLRITDLNGPFINFPNLTGMVKVQELVLRNCRINDTIPNDIGIMKKLKVLDLSFNKLTGPIPSTLQNLLGNINYIFLTNNSLSGEVPSWTSSNTLNIDLSYNNFTGAMQSSCQMSAPNLVSSYLPSANQEVTWCLKKDLPCSGKAEHHSLFINCGGGTIEIDGNIYEEDLFAQGQSNFYSVGERWGYSSTGIFMGNKSAPNLADNSFGLNVSGPSFYETARLSPLSLNYYGLCLRKGSYNVKLHFAEIMYSDDQTFSSLGRRIFDVSVQGNLVLKDFNIAERAGGVGKDFTYENKNVFVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNYVVETGGLSAGAIAGIVIASCVLVILVLVVLRIKGYICAKETVDSELRGLELQTGYFSLRQIKSATGNFDPKNKIGEGGFGPVYKGVLLDGSLIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGQQLLLVYEYMENNSLARALFGSAEHRLHLDWAARKKICMGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLTAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEDFVYLLDWAYVLQEQGNLLELVDPSLGSNYSKQGAMRMLNLALLCTNPSPTLRPPMSSVVSMLDGKLAVQAPLVKRTMDQDARFKAFEKLSQDSQTSVSSIPQDSLAQKSTLVDWPWIDSSVSVESIHETSDCSSSSKLL 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 37532606 37543789 + Bda009324.4 Bda12g00813 17828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00813 1013 ProSiteProfiles Protein kinase domain profile. 665 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00813 1013 Gene3D Phosphorylase Kinase; domain 1 633 740 - -
Bda12g00813 1013 SMART LRR_typ_2 304 327 IPR003591 -
Bda12g00813 1013 SMART LRR_typ_2 113 136 IPR003591 -
Bda12g00813 1013 SMART LRR_typ_2 160 183 IPR003591 -
Bda12g00813 1013 SMART LRR_typ_2 184 207 IPR003591 -
Bda12g00813 1013 Pfam Malectin domain 410 591 IPR021720 -
Bda12g00813 1013 SUPERFAMILY L domain-like 53 381 - -
Bda12g00813 1013 Gene3D Ribonuclease Inhibitor 269 382 IPR032675 -
Bda12g00813 1013 Gene3D Transferase(Phosphotransferase) domain 1 741 950 - -
Bda12g00813 1013 CDD STKc_IRAK 671 938 - -
Bda12g00813 1013 SUPERFAMILY Protein kinase-like (PK-like) 649 943 IPR011009 -
Bda12g00813 1013 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 979 - -
Bda12g00813 1013 Pfam Leucine Rich Repeat 306 328 IPR001611 GO:0005515
Bda12g00813 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Bda12g00813 1013 Pfam Protein tyrosine and serine/threonine kinase 668 935 IPR001245 GO:0004672|GO:0006468
Bda12g00813 1013 Gene3D Ribonuclease Inhibitor 34 268 IPR032675 -
Bda12g00813 1013 PANTHER - 70 979 - -
Bda12g00813 1013 SMART serkin_6 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00813 1013 Gene3D - 405 597 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00811 Bda-Chr5:56606926 Bda12g00813 Bda-Chr12:37532606 0 dispersed
Bda12g00813 Bda-Chr12:37532606 Bda03g01357 Bda-Chr3:49237166 6.14E-95 dispersed
Bda12g00813 Bda-Chr12:37532606 Bda12g00820 Bda-Chr12:37630529 4.29E-109 proximal
Bda03g01723 Bda-Chr3:56707656 Bda12g00813 Bda-Chr12:37532606 7.94E-94 transposed
Bda05g00933 Bda-Chr5:57893860 Bda12g00813 Bda-Chr12:37532606 1.11E-98 transposed
Bda07g00957 Bda-Chr7:11082695 Bda12g00813 Bda-Chr12:37532606 0 transposed
Bda09g00829 Bda-Chr9:18132694 Bda12g00813 Bda-Chr12:37532606 6.11E-33 transposed
Bda12g00776 Bda-Chr12:36466749 Bda12g00813 Bda-Chr12:37532606 6.14E-101 transposed
Bda15g00043 Bda-Chr15:1916344 Bda12g00813 Bda-Chr12:37532606 0 transposed
Bda15g00864 Bda-Chr15:13783625 Bda12g00813 Bda-Chr12:37532606 4.02E-22 transposed
Bda12g00813 Bda-Chr12:37532606 Bda05g00810 Bda-Chr5:56539402 1.40E-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69973 PF07714 PK_Tyr_Ser-Thr 5.40E-49 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00813 - - csv:101211151 1409.43