Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00823 | ATGGTCGATTTGCAGCGCGAAGCAGCAACGTCGTCGAGAATGGGGATAAGAGGGAGTGGAGGAGAGATTGTGGAGGTTCAAGGAGGTCACATTGTTCGTTCCATTGGAAGGAAAGATCGACATAGCAAGGTCTGCACGGCGAAAGGGCCGAGAGATCGCCGGGTTCGCCTCTCCGCCCACACTGCCATTCAGTTTTACGACGTTCAAGACCGCCTCGGCTACGACCGGCCCAGTAAAGCCGTCGATTGGCTCATCAGAAAGGCCAAAACAGCCATTGACGAGCTCGAAGAGCTTCCGGCATGGAAGCCAAATACATTAACCTCAATTTCTCTGCAACAACGGGAACAACGTTTGAGACAAGATGGAGAAAACCACCCAGATGGTACTCATCGAAATATCGTAAATACTTCTAGTTCTCTGAGATCAACAATCGCGGGTAGTGGGAGTAATACACTGCAAAATTTGCAGTTTTTGCAAATGGGAGAGACCCCAAATGACAGTACCTCTAGTCTTCTCCCCCGGTCGCTGGACTCGGACTCCATAGCTGATACCATCAAGTCCTTTTTCCCGATGGGTGCGACGACGTCACCGGAGATATCGTCGTCGACGATTCAGTTTCAGAGCTACCCACCTGCCGGAGATCTGCGACTCTCTTTGCAGTGCTTTAAAGACCCACTGTCACTCCATCATCATCAAGCTCAGCACCAGAATCATCAAAACGAGCATCCTTTCTTCTCTGGAGCATCTCCACTACCGGTGTTTGACGGAGGCTCTCTACCCCACTGGGCGGAGCATAAGCAACTCCACCCACCCATCGCCGGAGATTGGTCGATTTCAGAGAATGATTTCCTGGAATGCTTCTGGTGCAGAAACTGGTGGAGGCGATCAAGATGGAGGCGGGAATGGAAGTTTTATCTTCAACCTTCCTTCTAA | 933 | 50.91 | MVDLQREAATSSRMGIRGSGGEIVEVQGGHIVRSIGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIRKAKTAIDELEELPAWKPNTLTSISLQQREQRLRQDGENHPDGTHRNIVNTSSSLRSTIAGSGSNTLQNLQFLQMGETPNDSTSSLLPRSLDSDSIADTIKSFFPMGATTSPEISSSTIQFQSYPPAGDLRLSLQCFKDPLSLHHHQAQHQNHQNEHPFFSGASPLPVFDGGSLPHWAEHKQLHPPIAGDWSISENDFLECFWCRNWWRRSRWRREWKFYLQPSF | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 37667784 | 37668808 | + | Bda009335.1 | Bda12g00823 | 17838 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00823 | 310 | MobiDBLite | consensus disorder prediction | 114 | 134 | - | - | |
Bda12g00823 | 310 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 4 | 271 | IPR005333 | GO:0003700 | |
Bda12g00823 | 310 | PANTHER | TRANSCRIPTION FACTOR TCP4 | 4 | 271 | - | - | |
Bda12g00823 | 310 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bda12g00823 | 310 | ProSiteProfiles | TCP domain profile. | 37 | 95 | IPR017887 | - | |
Bda12g00823 | 310 | Pfam | TCP family transcription factor | 37 | 122 | IPR017887 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda05g00782 | Bda12g00823 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00262 | Bda-Chr7:3511873 | Bda12g00823 | Bda-Chr12:37667784 | 6.88E-66 | dispersed | |
Bda09g00513 | Bda-Chr9:6784640 | Bda12g00823 | Bda-Chr12:37667784 | 8.25E-81 | dispersed | |
Bda12g00823 | Bda-Chr12:37667784 | Bda14g01404 | Bda-Chr14:17469804 | 3.99E-61 | dispersed | |
Bda12g00823 | Bda-Chr12:37667784 | Bda05g00782 | Bda-Chr5:56270565 | 2.56E-155 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16804 | PF03634 | TCP | 7.10E-31 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00823 | - | - | csv:101206841 | 306.219 |