Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00823 ATGGTCGATTTGCAGCGCGAAGCAGCAACGTCGTCGAGAATGGGGATAAGAGGGAGTGGAGGAGAGATTGTGGAGGTTCAAGGAGGTCACATTGTTCGTTCCATTGGAAGGAAAGATCGACATAGCAAGGTCTGCACGGCGAAAGGGCCGAGAGATCGCCGGGTTCGCCTCTCCGCCCACACTGCCATTCAGTTTTACGACGTTCAAGACCGCCTCGGCTACGACCGGCCCAGTAAAGCCGTCGATTGGCTCATCAGAAAGGCCAAAACAGCCATTGACGAGCTCGAAGAGCTTCCGGCATGGAAGCCAAATACATTAACCTCAATTTCTCTGCAACAACGGGAACAACGTTTGAGACAAGATGGAGAAAACCACCCAGATGGTACTCATCGAAATATCGTAAATACTTCTAGTTCTCTGAGATCAACAATCGCGGGTAGTGGGAGTAATACACTGCAAAATTTGCAGTTTTTGCAAATGGGAGAGACCCCAAATGACAGTACCTCTAGTCTTCTCCCCCGGTCGCTGGACTCGGACTCCATAGCTGATACCATCAAGTCCTTTTTCCCGATGGGTGCGACGACGTCACCGGAGATATCGTCGTCGACGATTCAGTTTCAGAGCTACCCACCTGCCGGAGATCTGCGACTCTCTTTGCAGTGCTTTAAAGACCCACTGTCACTCCATCATCATCAAGCTCAGCACCAGAATCATCAAAACGAGCATCCTTTCTTCTCTGGAGCATCTCCACTACCGGTGTTTGACGGAGGCTCTCTACCCCACTGGGCGGAGCATAAGCAACTCCACCCACCCATCGCCGGAGATTGGTCGATTTCAGAGAATGATTTCCTGGAATGCTTCTGGTGCAGAAACTGGTGGAGGCGATCAAGATGGAGGCGGGAATGGAAGTTTTATCTTCAACCTTCCTTCTAA 933 50.91 MVDLQREAATSSRMGIRGSGGEIVEVQGGHIVRSIGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIRKAKTAIDELEELPAWKPNTLTSISLQQREQRLRQDGENHPDGTHRNIVNTSSSLRSTIAGSGSNTLQNLQFLQMGETPNDSTSSLLPRSLDSDSIADTIKSFFPMGATTSPEISSSTIQFQSYPPAGDLRLSLQCFKDPLSLHHHQAQHQNHQNEHPFFSGASPLPVFDGGSLPHWAEHKQLHPPIAGDWSISENDFLECFWCRNWWRRSRWRREWKFYLQPSF 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 37667784 37668808 + Bda009335.1 Bda12g00823 17838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00823 310 MobiDBLite consensus disorder prediction 114 134 - -
Bda12g00823 310 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 271 IPR005333 GO:0003700
Bda12g00823 310 PANTHER TRANSCRIPTION FACTOR TCP4 4 271 - -
Bda12g00823 310 MobiDBLite consensus disorder prediction 1 20 - -
Bda12g00823 310 ProSiteProfiles TCP domain profile. 37 95 IPR017887 -
Bda12g00823 310 Pfam TCP family transcription factor 37 122 IPR017887 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00782 Bda12g00823 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00262 Bda-Chr7:3511873 Bda12g00823 Bda-Chr12:37667784 6.88E-66 dispersed
Bda09g00513 Bda-Chr9:6784640 Bda12g00823 Bda-Chr12:37667784 8.25E-81 dispersed
Bda12g00823 Bda-Chr12:37667784 Bda14g01404 Bda-Chr14:17469804 3.99E-61 dispersed
Bda12g00823 Bda-Chr12:37667784 Bda05g00782 Bda-Chr5:56270565 2.56E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16804 PF03634 TCP 7.10E-31 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00823 - - csv:101206841 306.219