Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00882 ATGCCAACAGTTTGGTTTTCTCTGAAGAAGTCTTTGCATTGCAAATCAGAGCCGTCTGATGTCCACGACCCAAAATCAATCAGACATTTGAGTTCAATTTTGACCAAAAAAACAAGTAGAACAGGCTGTTCAGCAGGAAGATCAGGCTGTTCAAGGTCAATAGCAAATCTCAAAGATGTAATCCATGGCAGTAAAAGGCATCTAGAACGGCCACCAAGCTGTAGCCCAAGATCTATAGGAAGTAGTGAGTTTCTAAACCCAATTACTCACGAAGTAATTCTGAGTAACTCGAAATGCGAGCTCAAAATCACTGGCTATGGAGGTTTTCAAGATGGGTTTGGTAGTTCAGGCGGGACTGAAGCTCATAACAATGGCGGCTCAACTTTTGTGGGTACCTTAAGACCGGGTACGCCTGGGCCTGGAGGGTACCCTACGATGCACTATTTTAACCCTTCTTTTAGAACTTCGTCTACTTCTTCAAGAAAACACCCTTTTCTTGGATCAGATAGTTATAGAGAAGGGTCTGGCTATGGAGTTTCTGCAAAATCTGGGGGTGGAGCTGGCGTTTATTCAAGCAATAGGGTCTCTTTTGATGTAGATTCAGCTGTTAATGGCTCCTGTACAATCACTTGTCACAAATGTGGAGAGCAGTTTTGCCAAGGAGAAGCTGCCGAAGCTCACCATCTCTCTAAACATGCTGTAACCGAACTTATCGAAGGCGATTCCTCTCGGAAAATAGTCGAGATTATATGCCGATCGAGCTGGCTGAAATCGGAGAACCAATGCGGGAAGATAGAAAGAGTTTTAAAAGTTCACAACATGCAAAGAACACTTGCCCGTTTCGAGGAGTATCGAGAAATCGTGAAGGCAAAAGCCAGCAAACTCCCGAAAAAGCACCCTCGGTGCCTGGCCGACGGCAATGAGCTTTTGAGATTTTACGGCACTACCGTGGCCTGTTCACTTGGCCAAAGCGGCTCTTCGAGCCTTTGCGTGTCGGGAAAATGCAGTGTTTGCAGGATTATACGAAATGGGTTTACGGCGAGGAAGGAGTTGAAGGAAGGAGTTGGCGTATTTACGACTTCTACGAGTGCTAGAGCGTTCGAATCGATCGAAATCGTGGAAGATGACACGATGATGAGAAAAGCATTGATAGTTTGTAGGGTGATTGCAGGGAGAGTGCACAGACCTTTGGAGAACATTCAAGAAATGGCGGGGCTTGTAGGGTTTGATTCATTGGCTGGAAAAGTTGGTCTATATTCCAATATTGAAGAGCTGTATTTGCTTAGTCCCAAAGCTCTCCTGCCGTGCTTTGTTGTGATTTGCAAATCTTGA 1332 45.2 MPTVWFSLKKSLHCKSEPSDVHDPKSIRHLSSILTKKTSRTGCSAGRSGCSRSIANLKDVIHGSKRHLERPPSCSPRSIGSSEFLNPITHEVILSNSKCELKITGYGGFQDGFGSSGGTEAHNNGGSTFVGTLRPGTPGPGGYPTMHYFNPSFRTSSTSSRKHPFLGSDSYREGSGYGVSAKSGGGAGVYSSNRVSFDVDSAVNGSCTITCHKCGEQFCQGEAAEAHHLSKHAVTELIEGDSSRKIVEIICRSSWLKSENQCGKIERVLKVHNMQRTLARFEEYREIVKAKASKLPKKHPRCLADGNELLRFYGTTVACSLGQSGSSSLCVSGKCSVCRIIRNGFTARKELKEGVGVFTTSTSARAFESIEIVEDDTMMRKALIVCRVIAGRVHRPLENIQEMAGLVGFDSLAGKVGLYSNIEELYLLSPKALLPCFVVICKS 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 39556224 39557660 - Bda009413.1 Bda12g00882 17897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00882 443 MobiDBLite consensus disorder prediction 117 131 - -
Bda12g00882 443 MobiDBLite consensus disorder prediction 117 137 - -
Bda12g00882 443 Gene3D - 225 443 - -
Bda12g00882 443 PANTHER - 2 443 - -
Bda12g00882 443 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 443 - -
Bda12g00882 443 ProSitePatterns Zinc finger C2H2 type domain signature. 211 232 IPR013087 -
Bda12g00882 443 SUPERFAMILY ADP-ribosylation 234 442 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00334 Bda12g00882 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00557 Bda-Chr7:6918622 Bda12g00882 Bda-Chr12:39556224 1.56E-50 dispersed
Bda08g01222 Bda-Chr8:50076592 Bda12g00882 Bda-Chr12:39556224 6.51E-60 dispersed
Bda09g00094 Bda-Chr9:1809077 Bda12g00882 Bda-Chr12:39556224 3.17E-28 dispersed
Bda12g00882 Bda-Chr12:39556224 Bda07g00334 Bda-Chr7:4435105 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00882 - - gmx:100787790 661.759