Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00885 | ATGCCAACCTCATCGTCCGTCGGCGCTTTCTCCGACAAGGACTCAGAACCCTTCGTCGAAATCGACCCGACCGGACGTTACGGCCGCTACGGCGAGCTTCTCGGATCCGGGTCGGTGAAAAAGGTCTACAGAGCCTTCGATCAAGAAGAAGGAATAGAAGTAGCGTGGAACAAAGTGAAGCTCAGAAGCTTCAATGGCGATTCGGCGATGATAGAACGAGTCTTCTCCGAAGTAAGGCTGCTCAGAAACTTAAGGAACAAAAACATAATCTCTCTCCACCATGTTTGGAGAGACAACGAGAAGGAGAGTTTGAATTTCATTACAGAGGTCTGCACCAGTGGGAACTTGAGAGAATATCGGAAGAAGCACCGGAACGTCGCCATGAAAGCTCTGAAGAAATGGTCGAAGCAGATACTGAAAGGGTTGGATTATTTGCATACTCATCAGCCATGTGTTATTCACAGAGATCTTAACTGCAGTAATCTCTTCGTAAATGGCAATATTGGCCAGGTATTCCTCCATGGAATAATAACATCATTCTTTTTGGGTACAAGGAAGAACAAAACACTTTTTAACTTAAATATCATTAAAATTGGAGACCTGGGTTTGGCAGCCACAGTAGGGGAGAGCCATTTAGCTCATTCAATTTTAGGAACGCCCGAATTCATGGCGCCGGAGCTTTACGAGGAAGACTACACGGAAATGGTGGACATTTACTCCTTTGGAATGTGTTTACTCGAGATGGTGACATTAGAAATACCATATAGCGAGTGTGACAATATTGCTAAAATATACCGAAAAGTGTCCTCCGGAATAAGGCCTCTTGCTCTCAACAAGGTCAAGGACCCTCACTTCAAGTCGTTCATTGAGAAGTGCCTCGCTCAGCCTCGGTCTCGGCCGTCTGCCTCTGACCTTCTACGAGACTCATTCTTTGACGAAATAAAAGACGACGAAGATGATAATGACGATAATGATCATAATTATTTAGATTAG | 993 | 44.81 | MPTSSSVGAFSDKDSEPFVEIDPTGRYGRYGELLGSGSVKKVYRAFDQEEGIEVAWNKVKLRSFNGDSAMIERVFSEVRLLRNLRNKNIISLHHVWRDNEKESLNFITEVCTSGNLREYRKKHRNVAMKALKKWSKQILKGLDYLHTHQPCVIHRDLNCSNLFVNGNIGQVFLHGIITSFFLGTRKNKTLFNLNIIKIGDLGLAATVGESHLAHSILGTPEFMAPELYEEDYTEMVDIYSFGMCLLEMVTLEIPYSECDNIAKIYRKVSSGIRPLALNKVKDPHFKSFIEKCLAQPRSRPSASDLLRDSFFDEIKDDEDDNDDNDHNYLD | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 39587831 | 39589438 | + | Bda009418.1 | Bda12g00885 | 17900 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00885 | 330 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 11 | 174 | - | - | |
Bda12g00885 | 330 | SUPERFAMILY | Protein kinase-like (PK-like) | 23 | 317 | IPR011009 | - | |
Bda12g00885 | 330 | PANTHER | SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN | 192 | 327 | - | - | |
Bda12g00885 | 330 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 317 | - | - | |
Bda12g00885 | 330 | ProSiteProfiles | Protein kinase domain profile. | 28 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda12g00885 | 330 | Pfam | Protein kinase domain | 32 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda12g00885 | 330 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 192 | 327 | - | - | |
Bda12g00885 | 330 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 109 | - | - | |
Bda12g00885 | 330 | PANTHER | SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN | 11 | 174 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda12g00885 | Bda-Chr12:39587831 | Bda12g00949 | Bda-Chr12:40578890 | 0 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69975 | PF00069 | Pkinase | 3.30E-48 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00885 | K08867 | - | jre:108994268 | 470.7 |