Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00896 ACCGTCACTCGCTTTCTTTTTCCCCCCTATCCCTCTCTAACTTACAGAATGAGGTGTTCTTTTAAACTATCGATATTACTTCTTTTGTTCATTCTTTCACTAATCGACGTCAGTTTCGGACAAGATTACGACGACGATGAGGTGGCGGCCCCTCCGCCGGAGCAAGAAGACTGCAACGGGATTTTCTTGTCCTACACGTTCATTTCCCGGCAGAAAGAGTATCCTCATGTGAAGAACGCGACGGCCCAGTCGTGGGCGTTCAAGTCTCAAGTTAGGATTTTGAACGCCGGCTCGACGGAGCTGAAGGCTTGGAAGGTCTTCATCGGCTTTCAACACCAAGAAATATTAGTGTCTGCCAGCGGCGCCGTCGTGGTCGATGGCACTGATTTTCCTGCCGCTGTAGGTAACGGGACGACATTGGCTGGATACCCAATGGCCGACTTGGAAACTGCCATTGATACCGCCGGAGATATAAATCAGATTCAGGCTCTAATTCAGCTGGTCGGAACGCAATTCGGCGTCAAACCATCCGGCACTCCGATGCCAAAGACCATCCGACTCGTTCATGACGGTTTTAAGTGCCCGGCATCTCATCTTCGCGGGAAGAACACGATGCATGTATGCTGCAAAAAGGATCCGAAAGTGAAGTTGAAAGATAAGAAGACGAAGTTTTTGCCGAGGCAAAACGGCGATCTTTCACTAACATATGATGTGCTTCAAGCCTACGGAAACAACTACCTCGCACAAGTCACGATCGACAACAACCACCCTCTTGGCCGCCTCGATCACTGGAACTTGACATGGGAGTGGATGAGAGGAGAGTTCATTCAAACCATGAGAGGAGCCTACACCCACAAAAGAGACTATTCAGAGTGTATTTACGGCACCGCCGGCCAATACTACGCCGATTTCGACTTCTCTCAGGTGATGAACTGCGAAAAGCGGCCCGTAATTGCTGATCTTCCTGCCGACCGAGCAAACGACGAAAAAGTGGGGAAGTTGCCTTATTGCTGCCGGAACGGTAGCCTCTTGCCTTCCGTGATGGACGCGAGTAAATCAAGGTCTATTTTCCAATTACAAGTCTTTAAGATGCCTCCAGATCTGAACCGAACTGCGCTCACCCCTCCACAAAAATGGAAGATCAACGGCGTTCTGAACCCAAATTACAAATGCGGGCCCCCAATTCGGGTTGAGCCGACGGAGTTTCCCGACCCCAGTGGCCTTCAATCCACGAGCACCGCCATTGCTAGTTGGCAAGTCGTCTGCAATATTACACGGCCGAAACTCAAACAATCTCGGTGTTGTGTCTCGTTTTCGGCTTACTATAACGACTCGGTTATTCCGTGCAATACTTGCGCTTGCGGCTGTGCCGACCAAAGCGACACCTGCGATGCCGATGCTGATCCAATGCTTCTTCCAGCTGAGGCTCTTCTTGTTCCATTTGATAACAGAACAGCAAAGGCAAAAGCTTGGGCTAAGATCAAACACTCTCCAATCCCGAAGACATTGCCGTGTCCAGACAATTGCGGCGTTAGCATCAACTGGCACATAAATTCCGATTATAGCAACGGATGGACGGCTCGGGTGACGCTCTTCAACTGGGAAGATTACCCGTTCGAGGACTGGTTTACCGCAATTCAGATGAAGAAAGCCGGCAAAGGTTATGAAAATGTCTACTCCTTCAATGGAACTAAACTTACTAATCTCAACAACACCATTTTCTTCCAAGGTCTACCTGGTTTGAACTATCTAGTGGGCGAAACAAACGGGTCGAATCCGAAAACCGATCCTCGAGTTCCCGGAAAGCAGCAATCGGTGATTTCATTCACGAAGAAGAACCTTCACGACCTCAATATTCGACTCGGCGACGGGTTCCCTTCGAAGCTGTTCTTCAACGGCGAAGAATGCGCTCTTCCGACCGAAATTCCGTTGGCAAGCTCGGCATATCGGTTCAATACCGGATTTACTTGGATCTTTCTCGTTTTGATCTTTACTTTCGGGTTTATGGCAGAACAACTCCATTGA 2025 49.28 TVTRFLFPPYPSLTYRMRCSFKLSILLLLFILSLIDVSFGQDYDDDEVAAPPPEQEDCNGIFLSYTFISRQKEYPHVKNATAQSWAFKSQVRILNAGSTELKAWKVFIGFQHQEILVSASGAVVVDGTDFPAAVGNGTTLAGYPMADLETAIDTAGDINQIQALIQLVGTQFGVKPSGTPMPKTIRLVHDGFKCPASHLRGKNTMHVCCKKDPKVKLKDKKTKFLPRQNGDLSLTYDVLQAYGNNYLAQVTIDNNHPLGRLDHWNLTWEWMRGEFIQTMRGAYTHKRDYSECIYGTAGQYYADFDFSQVMNCEKRPVIADLPADRANDEKVGKLPYCCRNGSLLPSVMDASKSRSIFQLQVFKMPPDLNRTALTPPQKWKINGVLNPNYKCGPPIRVEPTEFPDPSGLQSTSTAIASWQVVCNITRPKLKQSRCCVSFSAYYNDSVIPCNTCACGCADQSDTCDADADPMLLPAEALLVPFDNRTAKAKAWAKIKHSPIPKTLPCPDNCGVSINWHINSDYSNGWTARVTLFNWEDYPFEDWFTAIQMKKAGKGYENVYSFNGTKLTNLNNTIFFQGLPGLNYLVGETNGSNPKTDPRVPGKQQSVISFTKKNLHDLNIRLGDGFPSKLFFNGEECALPTEIPLASSAYRFNTGFTWIFLVLIFTFGFMAEQLH 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 39694223 39696329 + Bda009430.1 Bda12g00896 17911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00896 674 PANTHER COBRA-LIKE PROTEIN 10 22 672 - -
Bda12g00896 674 PANTHER COBRA-LIKE PROTEIN 7 22 672 - -
Bda12g00896 674 Pfam COBRA-like protein 246 425 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01159 Bda-Chr3:12772776 Bda12g00896 Bda-Chr12:39694223 0 dispersed
Bda12g00896 Bda-Chr12:39694223 Bda15g00877 Bda-Chr15:14326156 3.58E-31 dispersed
Bda12g00896 Bda-Chr12:39694223 Bda08g00305 Bda-Chr8:3180030 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00896 - - csv:101216608 1038.1