Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00930 ATGAGAGGAAAAGGAGTTGCTGGTGCTCAATTGGTGGCTTCTGCACTTGCTGCAGCGGCGGAATCGCCCGTGCCTGTCGATAACTCGGTGGCCGGCGGATCGGTCGCGGGGGATATCATGTCTAGAGAGCCGAGGTACAGAGGTGTGAGGAAAAGGCCATGGGGGAGATTCGCTGCCGAGATCAGAGACCCTTGGAAGAAGTCCAGAGTGTGGCTCGGGACGTTTGATTCTGCTGAGGACGCGGCGCGTGCCTACGACGTCGCCGCTCGGACTCTCCGGGGTCCCAAGGCAAGAACCAATTTCCCTCCCGCGAACCCTAGCTTGCTAGATGTTCCTCCTCCTCGAAACCCGATCGCTCCCAATGAGGTAGCTGCCTTTGATCCTTTACTTGATAATGAGTTTTTTAATGCTGATGACTTCGAAGAGCCCCCGATTGACCCCCAGAGGCCGACCTCTAGCAGTCTGAGCTCCACCGTTGAGTCTTTCAGTGGGCCTAGACCTCGATCAGCGACAGTGGCGCCTCCTGCTTCGGCTTCAGCCTCAGCCTCGAGGAGGCATCCTCGTTCTCCGCCAGTTTCCCCTGAGGACTGCCACAGTGACTGTGATTCGTCGTCATCAGTGATCAACGACTGTGATGTTGCCTCCTCGTCCATGGTCCGTAGACCTTTGCAAATCGACCTCAATTTCCCTCCATTGGAGGACGTCGACTATTCCGGTGATGATCTCCTCTGCACCGATTTATGCCTTTGA 750 56.4 MRGKGVAGAQLVASALAAAAESPVPVDNSVAGGSVAGDIMSREPRYRGVRKRPWGRFAAEIRDPWKKSRVWLGTFDSAEDAARAYDVAARTLRGPKARTNFPPANPSLLDVPPPRNPIAPNEVAAFDPLLDNEFFNADDFEEPPIDPQRPTSSSLSSTVESFSGPRPRSATVAPPASASASASRRHPRSPPVSPEDCHSDCDSSSSVINDCDVASSSMVRRPLQIDLNFPPLEDVDYSGDDLLCTDLCL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40421460 40422209 + Bda009475.1 Bda12g00930 17945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00930 249 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Bda12g00930 249 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Bda12g00930 249 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 35 221 - -
Bda12g00930 249 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Bda12g00930 249 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Bda12g00930 249 MobiDBLite consensus disorder prediction 147 165 - -
Bda12g00930 249 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Bda12g00930 249 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Bda12g00930 249 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 221 - -
Bda12g00930 249 CDD AP2 44 104 IPR001471 GO:0003700|GO:0006355
Bda12g00930 249 MobiDBLite consensus disorder prediction 137 201 - -
Bda12g00930 249 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00702 Bda12g00930 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00278 Bda-Chr6:4687774 Bda12g00930 Bda-Chr12:40421460 5.61E-37 dispersed
Bda12g00930 Bda-Chr12:40421460 Bda13g00708 Bda-Chr13:8336371 1.56E-37 dispersed
Bda03g00371 Bda-Chr3:3123126 Bda12g00930 Bda-Chr12:40421460 7.23E-32 transposed
Bda12g00930 Bda-Chr12:40421460 Bda05g00702 Bda-Chr5:55301536 1.11E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16815 PF00847 AP2 2.60E-14 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00930 K09286 - zju:107432807 219.55