Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00943 GCAGGAGCTGATCCTTTGGTTGTAGCTCGTGGGGGGTTTTCTGGAGTGTTTCCTGATTCCAGTTTACAAGCCTACAAAATGGCTTTACAATTAAGTGTACCTGATGTAATCTTATGGTGTGATTTGCAGTTAACAAATGACGGAATGGGCATTTGTTTGCCTGATCTGAAGCTAGAAAACTCCACTAACATTGCAAATGTTTACAGTGATAAGTACAAGCTCTATCTCGTTAATGGCGTCCCAAGCAGAGGATGGTTTTCTTTTGATTTCACTCTCGATGATCTAAAATACGTTAATCTCAGTCAAGGTGTTTACTCCCGAAGTAATCAGTTTGATGCAAACAATTATGGTATTCTCACTGTACAAGACGTCGCAGGGCTTTCCCCGCCGGGATTATGGTTGAATATCCAGCATGATCTGTTTTTCTCACTACAGAATTTGAGTATGAAAAGCTTTGTGGTCTCTACATCCAAAAAAATCAACATCTCGTATATATCATCAACAGAGGTGAACTTTCTGAGAAATATCTCTTCAAGTTTCAAACCGAGCACCACAAAGCTGATATTTCGGTTTTCAACTAAAGACGACATTGAGCCAACAACAAACCAGGCTTATGCATTGTTACTGAAAAATCTTACATTCATCAAAACATTTGCCTCTGGAATCCTTGTCCCCAAAACTTACATATGGCCGGTAGATGTTAACGGTTATTTAGAACCCCATACATCTCTTGTCTCGGATGCTCATAATGAAGGACTAGAAGTTTTTGCGTCTGAGTTCTATAACGATGTTCCTATAAGTTACAATTATAGTTATGATCCCGTCTCCGAATACCTTAATTACATCGACAATGGTGAGTTTTCTGTGGATGGTATACTGTCTGATTTCCCGTCAACTGCATCTGAGGCTTTTGGTAAGTTCCCCTCTTTCAACTCTTTTAAATACTCTAGGCCTTTGGTTATCTCGAGATATGGAGCAAGTGGTGATTTTCCGGGTTGTACTGATTTGGCATACAAAAAAGCAATATCGGATGGTGTTGATATTCTCGACTGTCCTGTTCAAATAACAAAGGATGGGACACTTTTTTGCTCAGGGTCCATTGATCTAACAGATAACACGACAATACGTGAATTAGGCCGCAATTATCCAAAAAAAACTATCCCAGAGTTAAAGGTTAATCCTGGAATCTATACCTTTGACTTGACATGGCCTGAAATCAAGAATTTAACTCCAACAATATCAAACCCCTTTTCAGCATTTTCGATGTTCAGAAATCCGAAGTACAGAAATAGTGGGAAATATATGACTTTAGCTGAATTTTTGGCCTTGACAAAGAAAACAAGCACTATATCTGGAATCTTACTCATAATAGAGAATGTAGCTTACCTTGCTAGGCATAGTTTTGATGTAATTGATAAAGTCATCGAGGCCTTGACTGAAGCTGGTTATGGAGAGAAGATGGCTCAAAATGTCTTGATTCAGTCTTCTAATTCCTCTGTTTTAAGGAAATTCAAGGAGAAAAGCAATTATGAGCTTGTATACAGAGTTGACGAGAATGTTTGGGACATCCCATCGTCGACTATTGCAGACATCAAGAGTTTTGCAAGTGCTGTGGTTATAAACAAGTTTTCTGTCTTTCCGGATAATTATTTGTTCCTCATAGAATTAACCAATGTTGTATCGAATCTACAATCATCTCGGCTTTCGGTTTATGTACAACTCTTCAGTAACGAGTTTGTCTCCCAAGCTTATGATTTCTACTCGGACTCAACGATGGAGATCAACTCCTTCTCCGAGAGAGCCAAAGTTGATGGAATTATCACAGAATTTCCATTCACAGCTGCTAGATATAAAAAAAATAGATGTTTAAACTTGGGAAGCAACACACCACCTTACATGGATCCTGCTGACCCTGGCACACTCCTGCATTTTACTAAAGATTTGTACTTTGTTCAGTCGCCAGGTCCTCTTCCTTATCTCACTCAATCGGAAGTGTTTGAGCCGCCATTGCCGGCCGTTTCTAAACAAATTCCTCCAACTCCATCCCCAAGACCAAACAGACAGACTCAAACTCTACCATGCCATTTCTGCTACAATCTGCCTTTGCTCGTTGCTGCTCTTTTTCTCCTTCGACATGTACTATTCTGA 2148 39.57 AGADPLVVARGGFSGVFPDSSLQAYKMALQLSVPDVILWCDLQLTNDGMGICLPDLKLENSTNIANVYSDKYKLYLVNGVPSRGWFSFDFTLDDLKYVNLSQGVYSRSNQFDANNYGILTVQDVAGLSPPGLWLNIQHDLFFSLQNLSMKSFVVSTSKKINISYISSTEVNFLRNISSSFKPSTTKLIFRFSTKDDIEPTTNQAYALLLKNLTFIKTFASGILVPKTYIWPVDVNGYLEPHTSLVSDAHNEGLEVFASEFYNDVPISYNYSYDPVSEYLNYIDNGEFSVDGILSDFPSTASEAFGKFPSFNSFKYSRPLVISRYGASGDFPGCTDLAYKKAISDGVDILDCPVQITKDGTLFCSGSIDLTDNTTIRELGRNYPKKTIPELKVNPGIYTFDLTWPEIKNLTPTISNPFSAFSMFRNPKYRNSGKYMTLAEFLALTKKTSTISGILLIIENVAYLARHSFDVIDKVIEALTEAGYGEKMAQNVLIQSSNSSVLRKFKEKSNYELVYRVDENVWDIPSSTIADIKSFASAVVINKFSVFPDNYLFLIELTNVVSNLQSSRLSVYVQLFSNEFVSQAYDFYSDSTMEINSFSERAKVDGIITEFPFTAARYKKNRCLNLGSNTPPYMDPADPGTLLHFTKDLYFVQSPGPLPYLTQSEVFEPPLPAVSKQIPPTPSPRPNRQTQTLPCHFCYNLPLLVAALFLLRHVLF 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40508837 40514052 + Bda009488.1 Bda12g00943 17958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00943 715 CDD GDPD_SHV3_repeat_1 5 303 - -
Bda12g00943 715 Gene3D Phosphatidylinositol (PI) phosphodiesterase 316 618 IPR017946 GO:0006629|GO:0008081
Bda12g00943 715 Gene3D Phosphatidylinositol (PI) phosphodiesterase 3 304 IPR017946 GO:0006629|GO:0008081
Bda12g00943 715 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 2 689 - -
Bda12g00943 715 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 2 689 - -
Bda12g00943 715 ProSiteProfiles GP-PDE domain profile. 318 618 IPR030395 GO:0006629|GO:0008081
Bda12g00943 715 SUPERFAMILY PLC-like phosphodiesterases 317 618 IPR017946 GO:0006629|GO:0008081
Bda12g00943 715 ProSiteProfiles GP-PDE domain profile. 5 304 IPR030395 GO:0006629|GO:0008081
Bda12g00943 715 SUPERFAMILY PLC-like phosphodiesterases 5 303 IPR017946 GO:0006629|GO:0008081
Bda12g00943 715 Pfam Glycerophosphoryl diester phosphodiesterase family 325 611 IPR030395 GO:0006629|GO:0008081
Bda12g00943 715 Pfam Glycerophosphoryl diester phosphodiesterase family 12 298 IPR030395 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda09g00415 Bda12g00943 CCT
Bda07g00389 Bda12g00943 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00838 Bda-Chr9:19114647 Bda12g00943 Bda-Chr12:40508837 0 dispersed
Bda11g01732 Bda-Chr11:51956727 Bda12g00943 Bda-Chr12:40508837 1.30E-17 dispersed
Bda12g00943 Bda-Chr12:40508837 Bda07g00387 Bda-Chr7:4865272 1.99E-12 wgd
Bda12g00943 Bda-Chr12:40508837 Bda09g00415 Bda-Chr9:5133560 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00943 - - rcu:8277558 842.032