Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda12g00949 | ATGCCAACCTCATCGTCCGTCGGCGTTTTCTCCGACAAGGACTCAGAACCCTTCGTCGAAATTGACCCGACCGGACGTTACGGCCGCTACGGCGAGCTTCTCGGATCCGGGTCGGTGAAAAAGGTCTACAGAGCCTTCGATCAAGAAGAAGGAATAGAAGTAGCGTGGAACAAAGTGAAGCTCAGAAGCTTCCATGGCGATTCGGCGATGATAGAACGAGTCTTCTCCGAAGTAAGACTGCTCAGAAACTTGAGGAACAGAAACATAATCTCTCTCCACCATGTTTGGAGAGACAACGAGAAGGAGAGTTTGAATTTCATTACAGAGGTCTGCACCAGTGGGAACTTGAGAGAATATCGGAAGAAGCACCGGAACGTCGCCATGAAAGCTCTGAAGAAATGGTCGAAGCAGATACTGAAAGGGTTGGATTATTTGCATACTCATCAGCCATGTGTTATTCACAGAGATCTTAACTGCAGTAATCTCTTCGTAAATGGCAATATTGGCCAGATTAAAATTGGAGATCTGGGTTTGGCAGCCACAGTAGGGGAGAGCCATTTAGCTCATTCAATTTTAGGGACACCCGAATTCATGGCGCCAGAGCTTTACGAGGAAGACTACACGGAAATGGTGGACATTTACTCCTTCGGAATGTGTTTACTCGAGATGGTGACATTAGAAATACCATATAGCGAGTGTGACAATGTTGCAAAAATATACCGAAAAGTGTCCTCCGGAATAAGGCCTCTTGCTCTCAACAAGGTCAAGGACCCTTACTTCAAGTCGTTCATTGAGAAGTGCCTCGCTCAGCCTAGGTCCCGGCCGTCTGCCTCCGACCTTCTACGAGATTCATTCTTTGACGAAATAAAAGACGATGAAGATGATAATGACGATAATGATCGTAATTATTTAGATTAG | 918 | 45.97 | MPTSSSVGVFSDKDSEPFVEIDPTGRYGRYGELLGSGSVKKVYRAFDQEEGIEVAWNKVKLRSFHGDSAMIERVFSEVRLLRNLRNRNIISLHHVWRDNEKESLNFITEVCTSGNLREYRKKHRNVAMKALKKWSKQILKGLDYLHTHQPCVIHRDLNCSNLFVNGNIGQIKIGDLGLAATVGESHLAHSILGTPEFMAPELYEEDYTEMVDIYSFGMCLLEMVTLEIPYSECDNVAKIYRKVSSGIRPLALNKVKDPYFKSFIEKCLAQPRSRPSASDLLRDSFFDEIKDDEDDNDDNDRNYLD | 305 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 40578890 | 40580486 | - | Bda009496.1 | Bda12g00949 | 17964 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda12g00949 | 305 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 9 | 302 | - | - | |
| Bda12g00949 | 305 | Pfam | Protein kinase domain | 32 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bda12g00949 | 305 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 286 | IPR011009 | - | |
| Bda12g00949 | 305 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 292 | - | - | |
| Bda12g00949 | 305 | PANTHER | SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN | 9 | 302 | - | - | |
| Bda12g00949 | 305 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 109 | - | - | |
| Bda12g00949 | 305 | ProSiteProfiles | Protein kinase domain profile. | 28 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda12g00885 | Bda-Chr12:39587831 | Bda12g00949 | Bda-Chr12:40578890 | 0 | dispersed | |
| Bda12g00949 | Bda-Chr12:40578890 | Bda14g00794 | Bda-Chr14:6140531 | 7.98E-122 | dispersed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 69977 | PF00069 | Pkinase | 2.60E-51 | CL0016 | Bda | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda12g00949 | K08867 | - | jre:108994268 | 472.626 |