Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00952 ATGCATGAGCCTGAGTCACATCTGTGGCCTCCGATCGGCAATTATGATCATAGCTCAAGCTCTGAAACCCATCCAACAGTTCAGGACTGTGAAGCATACTGCACCCTGGATTCATTCTCAGGATCAAGCAATTTTACTGATCAAACTTCTCATTTTACTATGAACGAAAACGTGATTTCTCAGAAAGACTCTCATTCGCTCGACAACGTTTCTGGCTCACCCGTCAGCAAATCTTGCTTGTCGGATGATTCTGATGATCTGAGACATAAAATACTAGAATTAGAAACAGCTATGCTTGGACCTGATTTAAATATGCATGACACCTACATCATCAGAAACCCGTATGAACTACACCAAAATGAAGTAGAATCCGAGAAGTGGAATCAAATGATGGAGACGGTCTCGAAAAGGGAATTGAAAGGTATCCTTTGTGCATGTGCGAAAGCCATAGAAGAAGATAATATGTTTACGACTGAATGGTTGGTCTCGGAATTACGTCAGATGGTATCAGTTTCGGGCGAACCAATCCAACGCATAGGAGCATACGTTTTAGAAGCACTAATTGCAAGATTGGCCTCTTCGGGCAGTTCGATCTATAAAGCCCTCAGATGTAAAGAGCCTCTCAGTAACGAACTTCTGTCATACATGCACATACTTTACGAAGCCTGCCCATACTTCAAATTTGGATATATGTCGGCAAATGGTGCAATTGCTGAAGCTATCAAGGATGAAACAAGAGTCCATATAATTGACTTTCAGATCTCACAAGGTACCCAATGGCTGTCACTAATCCAGGCCCTTTCTGCTCGTCCTGGAGGACCCCCCATGATTAGAATAACAGGCATAGATGACCCAACATCAGCTCACGCCAGGGGAGGTGGGCTTGAAATCATTGGAAAGCGGTTATATGCCTTTGCAAAGTCTTGTAAAGTACCCTTAGAGTTTCATGCTGTTGAAATTCCTGTCTCTGAACTTCAACTTGAAGATCTAAGTAATTAA 999 42.64 MHEPESHLWPPIGNYDHSSSSETHPTVQDCEAYCTLDSFSGSSNFTDQTSHFTMNENVISQKDSHSLDNVSGSPVSKSCLSDDSDDLRHKILELETAMLGPDLNMHDTYIIRNPYELHQNEVESEKWNQMMETVSKRELKGILCACAKAIEEDNMFTTEWLVSELRQMVSVSGEPIQRIGAYVLEALIARLASSGSSIYKALRCKEPLSNELLSYMHILYEACPYFKFGYMSANGAIAEAIKDETRVHIIDFQISQGTQWLSLIQALSARPGGPPMIRITGIDDPTSAHARGGGLEIIGKRLYAFAKSCKVPLEFHAVEIPVSELQLEDLSN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40595240 40596238 - Bda009499.1 Bda12g00952 17967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00952 332 MobiDBLite consensus disorder prediction 1 24 - -
Bda12g00952 332 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 330 IPR005202 -
Bda12g00952 332 Pfam GRAS domain family 141 331 IPR005202 -
Bda12g00952 332 ProSiteProfiles GRAS family profile. 130 332 IPR005202 -
Bda12g00952 332 PANTHER GIBBERELLIN-RESPONSIVE PROTEIN, PUTATIVE-RELATED 6 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01581 Bda-Chr9:47274577 Bda12g00952 Bda-Chr12:40595240 2.23E-94 dispersed
Bda12g00952 Bda-Chr12:40595240 Bda01g00689 Bda-Chr1:34048835 1.44E-59 dispersed
Bda12g00952 Bda-Chr12:40595240 Bda13g00599 Bda-Chr13:6981834 9.96E-113 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16819 PF03514 GRAS 8.60E-61 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00952 - - jre:108985037 416.772