Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00952 | ATGCATGAGCCTGAGTCACATCTGTGGCCTCCGATCGGCAATTATGATCATAGCTCAAGCTCTGAAACCCATCCAACAGTTCAGGACTGTGAAGCATACTGCACCCTGGATTCATTCTCAGGATCAAGCAATTTTACTGATCAAACTTCTCATTTTACTATGAACGAAAACGTGATTTCTCAGAAAGACTCTCATTCGCTCGACAACGTTTCTGGCTCACCCGTCAGCAAATCTTGCTTGTCGGATGATTCTGATGATCTGAGACATAAAATACTAGAATTAGAAACAGCTATGCTTGGACCTGATTTAAATATGCATGACACCTACATCATCAGAAACCCGTATGAACTACACCAAAATGAAGTAGAATCCGAGAAGTGGAATCAAATGATGGAGACGGTCTCGAAAAGGGAATTGAAAGGTATCCTTTGTGCATGTGCGAAAGCCATAGAAGAAGATAATATGTTTACGACTGAATGGTTGGTCTCGGAATTACGTCAGATGGTATCAGTTTCGGGCGAACCAATCCAACGCATAGGAGCATACGTTTTAGAAGCACTAATTGCAAGATTGGCCTCTTCGGGCAGTTCGATCTATAAAGCCCTCAGATGTAAAGAGCCTCTCAGTAACGAACTTCTGTCATACATGCACATACTTTACGAAGCCTGCCCATACTTCAAATTTGGATATATGTCGGCAAATGGTGCAATTGCTGAAGCTATCAAGGATGAAACAAGAGTCCATATAATTGACTTTCAGATCTCACAAGGTACCCAATGGCTGTCACTAATCCAGGCCCTTTCTGCTCGTCCTGGAGGACCCCCCATGATTAGAATAACAGGCATAGATGACCCAACATCAGCTCACGCCAGGGGAGGTGGGCTTGAAATCATTGGAAAGCGGTTATATGCCTTTGCAAAGTCTTGTAAAGTACCCTTAGAGTTTCATGCTGTTGAAATTCCTGTCTCTGAACTTCAACTTGAAGATCTAAGTAATTAA | 999 | 42.64 | MHEPESHLWPPIGNYDHSSSSETHPTVQDCEAYCTLDSFSGSSNFTDQTSHFTMNENVISQKDSHSLDNVSGSPVSKSCLSDDSDDLRHKILELETAMLGPDLNMHDTYIIRNPYELHQNEVESEKWNQMMETVSKRELKGILCACAKAIEEDNMFTTEWLVSELRQMVSVSGEPIQRIGAYVLEALIARLASSGSSIYKALRCKEPLSNELLSYMHILYEACPYFKFGYMSANGAIAEAIKDETRVHIIDFQISQGTQWLSLIQALSARPGGPPMIRITGIDDPTSAHARGGGLEIIGKRLYAFAKSCKVPLEFHAVEIPVSELQLEDLSN | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 40595240 | 40596238 | - | Bda009499.1 | Bda12g00952 | 17967 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00952 | 332 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bda12g00952 | 332 | PANTHER | OSJNBA0084A10.13 PROTEIN-RELATED | 6 | 330 | IPR005202 | - | |
Bda12g00952 | 332 | Pfam | GRAS domain family | 141 | 331 | IPR005202 | - | |
Bda12g00952 | 332 | ProSiteProfiles | GRAS family profile. | 130 | 332 | IPR005202 | - | |
Bda12g00952 | 332 | PANTHER | GIBBERELLIN-RESPONSIVE PROTEIN, PUTATIVE-RELATED | 6 | 330 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda09g01581 | Bda-Chr9:47274577 | Bda12g00952 | Bda-Chr12:40595240 | 2.23E-94 | dispersed | |
Bda12g00952 | Bda-Chr12:40595240 | Bda01g00689 | Bda-Chr1:34048835 | 1.44E-59 | dispersed | |
Bda12g00952 | Bda-Chr12:40595240 | Bda13g00599 | Bda-Chr13:6981834 | 9.96E-113 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16819 | PF03514 | GRAS | 8.60E-61 | CL0063 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00952 | - | - | jre:108985037 | 416.772 |