Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00955 ATGGCTTCGCCGGAACAGATTCATGACGACGCTGAAGAGACCTTCTCCTACGCCGTGCAGCTTTCCATGTCGTCTTTGCTACCCATGTCGCTTTACGCCGCCGTAGAGCTGGGAGTGTTCGAAATCATAGCCAACGCCGGTCCCAACGCCTGGCTTTCCTCCTCCGACATCGCTGCCCAACTGACCACCCAGAATCCGCAGTCGGCCGCCATGCTCGATCGCATACTCCGCCTTCTGGTCAGCCACTCCGTGCTCCACTGCTCTCTAGCTACAGACACTAATGGCGATCCCCAGAGAGTTTATAGCCTAGCGCCAGTGGCCAAGTTCTTTGTTCGTGATGAAGATGGCGTTGCTTTAGGCCCTTTCCAAGCTCTGGCTCAGAACAAACTCTTTCTGGAAAGCTGGTCCCAAATGAAGAGTGCAGTTCTTGAAGGAGGAATTCCTTTCAACAAAGTGCATGGATGCCATATATATGAGTACCTTGCAAAAGATGAAAATTTCAATGCAATCTTCAACTCTGCAATGTTCAACTACACCACCATTGTCATGAAGAAGGTTCTGCAGTCCTACAATGGCTTCCTCGGCCTCAACAAGCTGGTGGACGTGGGTGGAGGGCTAGGGACATCCCTTAGTTTAATAACTTCCAAATACCCTTCTATCAAGGGTATTAATTTTGATCTTCCTCATGTTATTACTCGTGCCCCACCGTATCCCGGTACGTAA 723 50.21 MASPEQIHDDAEETFSYAVQLSMSSLLPMSLYAAVELGVFEIIANAGPNAWLSSSDIAAQLTTQNPQSAAMLDRILRLLVSHSVLHCSLATDTNGDPQRVYSLAPVAKFFVRDEDGVALGPFQALAQNKLFLESWSQMKSAVLEGGIPFNKVHGCHIYEYLAKDENFNAIFNSAMFNYTTIVMKKVLQSYNGFLGLNKLVDVGGGLGTSLSLITSKYPSIKGINFDLPHVITRAPPYPGT 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40637983 40639520 - Bda009503.1 Bda12g00955 17970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00955 240 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 237 IPR029063 -
Bda12g00955 240 Pfam O-methyltransferase domain 135 237 IPR001077 GO:0008171
Bda12g00955 240 Gene3D Vaccinia Virus protein VP39 111 240 IPR029063 -
Bda12g00955 240 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 13 239 - -
Bda12g00955 240 Gene3D - 2 110 IPR036388 -
Bda12g00955 240 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 240 IPR016461 GO:0008168
Bda12g00955 240 SUPERFAMILY Winged helix DNA-binding domain 9 114 IPR036390 -
Bda12g00955 240 Pfam Dimerisation domain 29 80 IPR012967 GO:0046983
Bda12g00955 240 PANTHER O-METHYLTRANSFERASE 13 239 IPR016461 GO:0008168
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00955 Bda-Chr12:40637983 Bda12g00957 Bda-Chr12:40681306 1.12E-168 dispersed
Bda12g00955 Bda-Chr12:40637983 Bda12g00956 Bda-Chr12:40662351 1.64E-19 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00955 K13066 - tcc:18589884 281.567