Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g00955 | ATGGCTTCGCCGGAACAGATTCATGACGACGCTGAAGAGACCTTCTCCTACGCCGTGCAGCTTTCCATGTCGTCTTTGCTACCCATGTCGCTTTACGCCGCCGTAGAGCTGGGAGTGTTCGAAATCATAGCCAACGCCGGTCCCAACGCCTGGCTTTCCTCCTCCGACATCGCTGCCCAACTGACCACCCAGAATCCGCAGTCGGCCGCCATGCTCGATCGCATACTCCGCCTTCTGGTCAGCCACTCCGTGCTCCACTGCTCTCTAGCTACAGACACTAATGGCGATCCCCAGAGAGTTTATAGCCTAGCGCCAGTGGCCAAGTTCTTTGTTCGTGATGAAGATGGCGTTGCTTTAGGCCCTTTCCAAGCTCTGGCTCAGAACAAACTCTTTCTGGAAAGCTGGTCCCAAATGAAGAGTGCAGTTCTTGAAGGAGGAATTCCTTTCAACAAAGTGCATGGATGCCATATATATGAGTACCTTGCAAAAGATGAAAATTTCAATGCAATCTTCAACTCTGCAATGTTCAACTACACCACCATTGTCATGAAGAAGGTTCTGCAGTCCTACAATGGCTTCCTCGGCCTCAACAAGCTGGTGGACGTGGGTGGAGGGCTAGGGACATCCCTTAGTTTAATAACTTCCAAATACCCTTCTATCAAGGGTATTAATTTTGATCTTCCTCATGTTATTACTCGTGCCCCACCGTATCCCGGTACGTAA | 723 | 50.21 | MASPEQIHDDAEETFSYAVQLSMSSLLPMSLYAAVELGVFEIIANAGPNAWLSSSDIAAQLTTQNPQSAAMLDRILRLLVSHSVLHCSLATDTNGDPQRVYSLAPVAKFFVRDEDGVALGPFQALAQNKLFLESWSQMKSAVLEGGIPFNKVHGCHIYEYLAKDENFNAIFNSAMFNYTTIVMKKVLQSYNGFLGLNKLVDVGGGLGTSLSLITSKYPSIKGINFDLPHVITRAPPYPGT | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 40637983 | 40639520 | - | Bda009503.1 | Bda12g00955 | 17970 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g00955 | 240 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 119 | 237 | IPR029063 | - | |
Bda12g00955 | 240 | Pfam | O-methyltransferase domain | 135 | 237 | IPR001077 | GO:0008171 | |
Bda12g00955 | 240 | Gene3D | Vaccinia Virus protein VP39 | 111 | 240 | IPR029063 | - | |
Bda12g00955 | 240 | PANTHER | CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE | 13 | 239 | - | - | |
Bda12g00955 | 240 | Gene3D | - | 2 | 110 | IPR036388 | - | |
Bda12g00955 | 240 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 19 | 240 | IPR016461 | GO:0008168 | |
Bda12g00955 | 240 | SUPERFAMILY | Winged helix DNA-binding domain | 9 | 114 | IPR036390 | - | |
Bda12g00955 | 240 | Pfam | Dimerisation domain | 29 | 80 | IPR012967 | GO:0046983 | |
Bda12g00955 | 240 | PANTHER | O-METHYLTRANSFERASE | 13 | 239 | IPR016461 | GO:0008168 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda12g00955 | Bda-Chr12:40637983 | Bda12g00957 | Bda-Chr12:40681306 | 1.12E-168 | dispersed | |
Bda12g00955 | Bda-Chr12:40637983 | Bda12g00956 | Bda-Chr12:40662351 | 1.64E-19 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g00955 | K13066 | - | tcc:18589884 | 281.567 |