Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00959 ATGAATAGTGCAGTTCTTGAAGGAGGAATTCCTTTCAACAAAGTGCATGGATGCCATTCGTATGAGTACCCTGAAAAAGATGAAAATTTCAATGCAATCTTCAACTCTGCAATGTTCAACTACACCACCATTGTCATGAAGAAGGTTATGCAGTCCTACAATGGCTTCCTCGGCCTCAACAAGCTGGTGGATGTGGGTGGAGGGCTAGGGACAACCCTTAGTATAATAACTTCCAAATACCCTTCTATCAAAGGTGTTAATTTTGATCTTCATCATGTTATTACTTGTGCCCCACAGTATCCCGGGGTTGAACATGTTGGTGGGGATATGTTTGAGAGTGTTCCAAGAGGAGATGCCATTTTTTTGAAGTGGATACTCCATAACTGGAGTGATGATCACTGCTTGAAGTTGCTGATGAACTGCTTTGTCGCGTTACCCGATGCCGGAAATGTGATCGTCATGGACTCAGTCGTTCCTAGCTTGCCGGAATTGACTACGGCCTACAGAAACACATGCGCGTTGGATGTGCAAATGATGACTCAATACACAGGAGGAAAAGAGAGGACCAAAGAGGAATTCACCGCCTTAGCGACGGGAGCCGGATTCAGCGGTGTTAGATTCCGTTGTTTCGTCTCAAACTATTGGATCATGGAGTTCTTCAAGTAA 666 44.59 MNSAVLEGGIPFNKVHGCHSYEYPEKDENFNAIFNSAMFNYTTIVMKKVMQSYNGFLGLNKLVDVGGGLGTTLSIITSKYPSIKGVNFDLHHVITCAPQYPGVEHVGGDMFESVPRGDAIFLKWILHNWSDDHCLKLLMNCFVALPDAGNVIVMDSVVPSLPELTTAYRNTCALDVQMMTQYTGGKERTKEEFTALATGAGFSGVRFRCFVSNYWIMEFFK 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40799627 40800760 - Bda009507.1 Bda12g00959 17974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00959 221 Gene3D Vaccinia Virus protein VP39 1 221 IPR029063 -
Bda12g00959 221 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 2 220 - -
Bda12g00959 221 Pfam O-methyltransferase domain 3 203 IPR001077 GO:0008171
Bda12g00959 221 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 221 IPR016461 GO:0008168
Bda12g00959 221 PANTHER O-METHYLTRANSFERASE 2 220 IPR016461 GO:0008168
Bda12g00959 221 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 219 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00959 Bda-Chr12:40799627 Bda12g01001 Bda-Chr12:41466125 6.74E-150 dispersed
Bda12g00959 Bda-Chr12:40799627 Bda12g00960 Bda-Chr12:40808503 1.70E-155 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00959 K13066 - tcc:18589884 314.309