Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g00974 ATGGCTTCAAAATCAGGTGCTCAAACTTCCATTGAAGGGCAGAGGAAAGTTCTCGGCGATCAAACAGCAGAAGGAAACTCTCATAAGCCTCAACCTTTGCAGATTAGCAAAACAGGAAAATCAGAACCGGTCACCCCGAAAGACAATCCGTTAATTGTTCCGAAACTTCCTGTTGAAACTGCTGAAAATAAAAAGGTAATCAACTCTTTTCATGAAGAGTCTTCCACTCCAAATTCCTTAGCTGATAAACTACACTCGAATTTATCTGTTCTCGATTCTACCCAAGTTCCAACCAGTGCTGATGATCAAAAGAAGAAGACATTAGAAAAAGCAGCCATTTCGAAAGAGAGCGATGGAACCAAAAGTCATCCTATAACAAGCGGAAGTGCCAATAGTCGACCCGAGTTTATGGAGAGTGGAAAGAGTAGTAGTATTTGTAGGGGCAGCACGAGCAGTGATATGAGCGACGAGAGTACATGTAGTAGTTTAAGTAGCACGATTAGCAAGCCTCATAAGGCAAACGATATAGGATGGGAAGCAATTCAAGCAGTTCGAGCCAAAGTCGGCGTTTTGGGTGTAAGCCATTTCAGACCCTTGAAGAGATTAGGATGTGGGGATATTGGATCCGTTTTTCTCTCAGAATTGAGAGGGACAAAGTGCTATTTCGCGATGAAAGTTATGGACAAAGAATCTCTCGAGGGTCGGAAGAAACTGATTCGAGCTCAGACCGAAAGAGAGATACTTCAATTATTAGACCATCCTTTTCTTCCTACTTTGTATACTCATTTCGAGACTGATAAGTTATCTTGTTTAGTAATGGAGTTTTGCCCTGGAGGTGACTTGCACACTCTTCGGCAGAGACAACCCGGGAAATATTTTTCGGAGCAAGCTGTCAAGTTTTATGTGGCAGAAATTCTTCTTGCTCTAGAGTATCTCCACATGCTCGGAATTATTTATCGCGATCTGAAGCCAGAAAATGTTCTTGTGAGAGAGGATGGACATATTATGCTTTCTGACTTCGACCTTTCTCTTCGTTGTGCCTTTAGCCCGACACTTGTGAAGTTTTCAGCGCCAGAGTCCGACCCCTTGAGGAAGAACCCTGTTTATTGCATCCAACCAGCCTGCATTGCACCCTCTTGCATACAACCTTCATGTGTTGTTCCAACAACTTGCATTTCACCTCGTTTCTTCCTAGGCAAATCGAAAAAAGACCGAAAACCCAAAAGCGAAGCCGGAAACCAAGTCAGCCCGTTGCCAGAGCTGATTGCCGAGCCTACAAATGCTCGATCAATGTCATTTGTTGGAACCCATGAGTACTTAGCTCCTGAAATCATCAAGGGTGAAGGCCATGGCAGTGCTGTTGATTGGTGGACTTTTGGGATTTTTATCTATGAGCTTTTGTTTGGTAAGACTCCTTTCAAAGGGTCAGGCAATTCTGCCACCTTGGCCAACGTCGTGGGTCAACCTTTACGCTTTCCTGATTCGCCGGTGGTAAGCTTTTCAGCTAGGGACTTGATTAGAGGTTTACTCGTGAAAGAGCCTCAACATCGATTGGCGTACAAAAGGGGCGCTACTGAAATTAAACAACACCCGTTTTTCGAAGGGGTTAACTGGGCGCTAGTTAGGTGTGCTAGCCCACCGGAGATTCCAAGACCATTTGAAATCGAAAGAATTCAAGCTCCGACTTCGACAACAATAGGCAAAGGTGGTAATGCTTGTCCGCATCGAAGTAACTATTTGGAATTTGATTTCTTCTAA 1758 44.03 MASKSGAQTSIEGQRKVLGDQTAEGNSHKPQPLQISKTGKSEPVTPKDNPLIVPKLPVETAENKKVINSFHEESSTPNSLADKLHSNLSVLDSTQVPTSADDQKKKTLEKAAISKESDGTKSHPITSGSANSRPEFMESGKSSSICRGSTSSDMSDESTCSSLSSTISKPHKANDIGWEAIQAVRAKVGVLGVSHFRPLKRLGCGDIGSVFLSELRGTKCYFAMKVMDKESLEGRKKLIRAQTEREILQLLDHPFLPTLYTHFETDKLSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEILLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAFSPTLVKFSAPESDPLRKNPVYCIQPACIAPSCIQPSCVVPTTCISPRFFLGKSKKDRKPKSEAGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFIYELLFGKTPFKGSGNSATLANVVGQPLRFPDSPVVSFSARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALVRCASPPEIPRPFEIERIQAPTSTTIGKGGNACPHRSNYLEFDFF 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40896033 40898348 - Bda009520.2 Bda12g00974 17989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g00974 585 Gene3D Transferase(Phosphotransferase) domain 1 427 550 - -
Bda12g00974 585 Gene3D Transferase(Phosphotransferase) domain 1 280 382 - -
Bda12g00974 585 ProSiteProfiles Protein kinase domain profile. 196 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00974 585 SMART serkin_6 196 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00974 585 MobiDBLite consensus disorder prediction 102 117 - -
Bda12g00974 585 MobiDBLite consensus disorder prediction 1 58 - -
Bda12g00974 585 MobiDBLite consensus disorder prediction 91 170 - -
Bda12g00974 585 CDD STKc_phototropin_like 194 552 - -
Bda12g00974 585 MobiDBLite consensus disorder prediction 1 43 - -
Bda12g00974 585 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL2 13 585 - -
Bda12g00974 585 PANTHER FLIPPASE KINASE 1-RELATED 13 585 - -
Bda12g00974 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Bda12g00974 585 MobiDBLite consensus disorder prediction 119 170 - -
Bda12g00974 585 Pfam Protein kinase domain 198 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00974 585 Pfam Protein kinase domain 430 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g00974 585 SUPERFAMILY Protein kinase-like (PK-like) 174 558 IPR011009 -
Bda12g00974 585 Gene3D Phosphorylase Kinase; domain 1 195 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00847 Bda-Chr7:9920701 Bda12g00974 Bda-Chr12:40896033 0 dispersed
Bda11g00409 Bda-Chr11:4409250 Bda12g00974 Bda-Chr12:40896033 0 dispersed
Bda12g00974 Bda-Chr12:40896033 Bda13g01631 Bda-Chr13:39798999 0 dispersed
Bda12g00974 Bda-Chr12:40896033 Bda05g00678 Bda-Chr5:55076302 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69979 PF00069 Pkinase 7.60E-37 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g00974 K08286 - zju:107434015 868.226