Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g01038 GAACGGCTGCCATTGGAAGAAGTTTTCGAACAACTTAGAACATCACCTCAGGGACTTACCTCCGAAGAAGCCAAAGCTCGAGAATTGATCTTCGGCCAGAACCGTCTCGAAGAAAAGCCGGAAAACAAATTTTTCAAATTTTTAGGGTTCATGTGGAATCCACTGTCATGGGTTATGGAAGCTGCAGCAGTTATGGCCATTGCTCTGGCTAATGGTGGAGGTCAGCCTCCAGACTGGCAAGATTTTGTGGGTATTATTTGTCTGCTCTTAATCAACTCAACAATCAGTTTTATCGAAGAAAACAATGCCGGAAATGCTGCTGCAGCCCTCATGGCCCGTTTAGCTCCAAAAACACGAGTTCTTAGAGATGGGATATGGCAAGAGCAAGATGCTTCTGTTTTAGTACCTGGAGATATAGTTACCATAAAACTAGGGGATATTATCCCCGCTGATGCTCGATTGCTCGAAGGAGACCCCCTTAAGATTGATCAGGCATCGGCACTTACCGGAGAATCATTACCGGTCACCAAGAGAACAGGCGATGAAGTTTATTCCGGCTCCACCTGCAAACAAGGAGAGATTGAGGCAGTTGTTATAGCAACAGGCGTTCACTCATTTTTCGGAAAGGCTGCTCATCTAGTTGACTCCACCGAAGTTGTCGGACATTTCCAGAAGGTGCTTACCTCCATTGGAAATTTCTGCATTTGCTCCATAGCTGTGGGAATGATTCTTGAAATCATCGTCATGTTCCCTGTACAGCACCGTACCTACAGAGACGGAATCAACAATCTCCTTGTCCTATTGATCGGAGGAATTCCCATTGCTATGCCGACAGTCTTGTCCGTGACTCTTGCAATTGGTTCTCACCGGCTTTCTCAACAGGGTGCCATTACAAAGAGGATGACTGCAATTGAAGAAATGGCCGGAATGGATGTTCTGTGCAGTGATAAAACAGGAACACTTACCCTGAACCGCCTCTCTGTTGACAAAAATCTTGTTGAGGTCTTTAACAAAGATATAGACAAAGACACGGTTGTCTTGTTTGCAGCCAGAGCATCAAGAATGGAGAATCAGGATGCTATTGATGCAGCAATTGTCAACATGCTTGCTGATCCAAAGGAGGCTCGAGCAAACATCAAGGAAGTGCATTTTCTGCCTTTCAATCCAGTTGACAAGCGTACTGCTATTACCTATGCTGATTCTGATGGTAACTGGCATCGTACCAGCAAAGGCGCTCCCGAACAGATTTTAAATCTCTGCAAAGAGAAAAATGAGATTGCTGGAAAAGTGCACTCCATCATAGACAAATTCGCCGAAAGAGGACTGCGATCACTTGGAGTTGCATATCAGACGGTTCCTGAAAGAAGCAAGGAAAGCGCTGGAAGCGAGTGGACATTTTGTGGGTTGTTACCGTTGTTTGATCCTCCAAGACACGATAGTGGAGAGACCATCCGTCGGGCACTTAACCTTGGAGTTTGTGTGAAGATGATTACTGGTGATCAGTTGGCCATTGCAAAGGAGACAGGCCGACGTCTTGGAATGGGAACAAATATGTACCCATCTTCTTCATTGCTAGGCCGCCAAAAAGATGAAAATGAAGCTCTTCCAGTGGAGGAGCTCATCGAGAAAGCAGACGGCTTTGCTGGAGTATTTCCAGGTACTGTAGTTCAATGCTCTGCCCTTTCATTGATTTCGCTAATTGCCTTCTATGTTCAACTTCCAGAGCACAAATATGAAATCGTTAGGATTTTACAAGAAAAGAAGCATGTGGTTGGAATGACTGGGGATGGTGTGAATGATGCACCTGCTTTAAAGAAAGCGGATATCGGTATAGCAGTGGCAGATGCCACAGATGCTGCAAGAAGTGCTTCAGATATTGTCTTAACTGAGCCTGGTCTGAGTGTCATCATCAGTGCTGTCTTAACTAGCCGAGCAATTTTCCAAAGAATGAAGAACTATACCATATATGCCGTCTCCATTACCATTCGTATTGTGCTTGGTTTTGTGCTTCTGGCTTTGATATGGGAATTCGATTTCCCACCTTTCATGGTCCTGATCATTGCAATATTGAATGATGGAACAATCATGACTATTTCTAAAGATAGAGTCAAACCATCTCCGGGCCCAGATAGTTGGAGGCTCCCTGTAATCTTTGCTACAGGGATCGTAATCGGCACATATCTTGCTCTAGTTACTGTGCTATTCTTCTGGTTGGTAGTGGGTACAGACTTCTTTGAGACTCGATTTCATGTCGTTTCTTTGACTAACAACTCAAGAAAAGTAGCAGCTGCTGTATATCTGCAAGTGAGCATCATCAGTCAGGCTCTCATATTCGTCACTCGTAGCCATGGATGGTCATATTCGGAGCGGCCTGGAGTTCTCTTGATGTGTGCATTCGTGGTAGCTCAGCTGGTGGCTACCTTAATTGCAGTCTATGCAAATATAAGTTTTGCTTTCATCAGTGGTATCGGATGGAGATGGGCTGGTGTCATCTGGCTATATAGCGCGATCTTCTATGTTCCTCTTGATGTTATTAAGTTCATAATTCGGTATACCGTGAGTGGAGAAGCTTGGAATCTGTTATTTGACAGAAAGACATTGTTTACATCGAAGAAAGACTACGGCAGTGAAGATAGAGCAGCTAAATGGGTGCAGTCTCAAAGAAGTCTCCACGGATTAGGGTCATCTGCAGAATTGGAGTTTGACGGTAGGCGATCGACTTTGATAGCAGAGCAGGCGAAGAGGCGAGCCGAAATAGCTAGGCTAGGAGAGTTGCACACTCTGAAAGGACATGTAGAATCTGTGGTGAGGCTTAAAAACTTGGACGTGGACATAATCCAATCTGCTCATACAGTCTAA 2859 44.77 ERLPLEEVFEQLRTSPQGLTSEEAKARELIFGQNRLEEKPENKFFKFLGFMWNPLSWVMEAAAVMAIALANGGGQPPDWQDFVGIICLLLINSTISFIEENNAGNAAAALMARLAPKTRVLRDGIWQEQDASVLVPGDIVTIKLGDIIPADARLLEGDPLKIDQASALTGESLPVTKRTGDEVYSGSTCKQGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPVQHRTYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDKNLVEVFNKDIDKDTVVLFAARASRMENQDAIDAAIVNMLADPKEARANIKEVHFLPFNPVDKRTAITYADSDGNWHRTSKGAPEQILNLCKEKNEIAGKVHSIIDKFAERGLRSLGVAYQTVPERSKESAGSEWTFCGLLPLFDPPRHDSGETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRQKDENEALPVEELIEKADGFAGVFPGTVVQCSALSLISLIAFYVQLPEHKYEIVRILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPGPDSWRLPVIFATGIVIGTYLALVTVLFFWLVVGTDFFETRFHVVSLTNNSRKVAAAVYLQVSIISQALIFVTRSHGWSYSERPGVLLMCAFVVAQLVATLIAVYANISFAFISGIGWRWAGVIWLYSAIFYVPLDVIKFIIRYTVSGEAWNLLFDRKTLFTSKKDYGSEDRAAKWVQSQRSLHGLGSSAELEFDGRRSTLIAEQAKRRAEIARLGELHTLKGHVESVVRLKNLDVDIIQSAHTV 952
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 42144994 42150558 + Bda009605.1 Bda12g01038 18053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g01038 952 PANTHER CALCIUM-TRANSPORTING ATPASE 572 932 - -
Bda12g01038 952 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Bda12g01038 952 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 574 681 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g01038 952 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 85 521 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g01038 952 CDD P-type_ATPase_H 18 847 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda12g01038 952 PRINTS P-type cation-transporting ATPase superfamily signature 314 328 - -
Bda12g01038 952 PRINTS P-type cation-transporting ATPase superfamily signature 594 613 - -
Bda12g01038 952 PRINTS P-type cation-transporting ATPase superfamily signature 164 178 - -
Bda12g01038 952 PRINTS P-type cation-transporting ATPase superfamily signature 468 479 - -
Bda12g01038 952 PRINTS P-type cation-transporting ATPase superfamily signature 617 629 - -
Bda12g01038 952 PRINTS P-type cation-transporting ATPase superfamily signature 490 500 - -
Bda12g01038 952 ProSitePatterns E1-E2 ATPases phosphorylation site. 316 322 IPR018303 -
Bda12g01038 952 SUPERFAMILY HAD-like 310 641 IPR036412 -
Bda12g01038 952 Pfam haloacid dehalogenase-like hydrolase 310 608 - -
Bda12g01038 952 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 18 552 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda12g01038 952 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 555 - -
Bda12g01038 952 Pfam Cation transporter/ATPase, N-terminus 3 65 IPR004014 -
Bda12g01038 952 Gene3D - 183 318 - -
Bda12g01038 952 Gene3D - 528 852 - -
Bda12g01038 952 Gene3D - 50 135 - -
Bda12g01038 952 SFLD p-type atpase 296 645 IPR044492 -
Bda12g01038 952 Pfam E1-E2 ATPase 114 293 - -
Bda12g01038 952 Gene3D - 326 473 IPR023299 GO:0000166
Bda12g01038 952 SFLD C1.7: P-type atpase like 296 645 - -
Bda12g01038 952 Gene3D - 905 952 - -
Bda12g01038 952 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 852 IPR023298 -
Bda12g01038 952 PANTHER CALCIUM-TRANSPORTING ATPASE 1 555 - -
Bda12g01038 952 SUPERFAMILY Calcium ATPase, transduction domain A 116 214 IPR008250 -
Bda12g01038 952 PRINTS H+-transporting ATPase (proton pump) signature 766 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g01038 952 PRINTS H+-transporting ATPase (proton pump) signature 544 560 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g01038 952 PRINTS H+-transporting ATPase (proton pump) signature 430 448 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda12g01038 952 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 572 932 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00628 Bda12g01038 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g01038 Bda-Chr12:42144994 Bda13g01294 Bda-Chr13:35220963 0 dispersed
Bda12g01038 Bda-Chr12:42144994 Bda05g00628 Bda-Chr5:54373102 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g01038 K01535 - jre:108983058 1576.22