Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g01075 ATGATGAATCTGGAGCAGAAGCGGGGCAAGCAAGAGAAAGGATCGGACGAAGCCGAAAAAGTAGTTGTGGCCGTGAAGGCATCAAAAGAAATCCCTAAGACTGCGTTGGTTTGGGCATTGACTCATGTTGTTCAACCTGGAGATTGCATAACACTTCTTGTAGTTGTCCCCTCGCAAAGCTCTGGTAGAAAATTGTGGGGTTTCCCGAGATTTGCTGGGGATTGTGCCAATGGTCACAAAAAGTCTCATTTAAGTGCAAGCCCGGACCAGAAGTGCAATATTACTGATTCATGCTCCCAGATGATCCTTCAACTTCATGATGTTTACGATCCAAATAAGATAAATGTTAAGATAAAAATTATATCTGGGTCCCCTAGTGGAGCTGTGGCTGTAGAGGCAAAGAGAGCTCAGGCCAGTTGGGTTGTATTAGACAAGCAGCTCAAACATGAGGAGAAGCGATGCATGGAAGAGCTCCAATGCAACATTGTTGTCATGAAGCGTTCCCAGCCAAAAGTTCTTCGCTTGAATTTGGTTGGTTCACCTAAAAAGGAACCCGAAATCATCTCTTTATTAGGTTCTGATCCGGATGAAGGGGCTGAGAATAATCAGGGAAAAAAGAACCAGTCTCTCAATACCATTCGCGGTCCTTTAGTGACTCCAAATAGTAGTCCAGAGCTTGGTACTCCATTTACCACCACGGAAGCTGGAACTTCATCAGTGTCAAGCTCTGATCCGGGGACATCACCTTTTTTCATACCTGAAATTAGTCGAGATCTGAAGAAAGATGAATCATTAGTAATTAAGGAAAACAAAGAACTTGGCGATACAAGTTCAGATTCAGACTGTGACAATTTATCGGTATCTTCAACAAGTATGAGATTCCAACCATGGATGACAGAATTTATAAATGCTCATTATCAACCCTTGCAACAAGGGAGCGTGATATCAAATAGGAGTGATGATAAGCCTCATGCAACAACAAGCAAAACTTTGCAACAAACGTATTCAAAAACTGATGCAGAAGCCGGAATTAGAATGCCAAAACACAGAAATGATTCTGACTTTGGTGGCAACGTAAGGGAAGCAGTCTCGTTGTCCAGAAATATGCCTCTCGGACCCCCTCCACTGTGTTCAATATGCCAACATAAAGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGCTGGAGCTTGCTACTGGCGGATTTTCGCAAGCCAATTTCTTGGCTGAAGGAGGTTTTGGATCAGTTCACAGAGGAGTTCTACCTGATGGTCAAGCAGTTGCGGTCAAGCAACATAAACTGGCCAGTTCTCAAGGAGACCTTGAGTTTTGTTCAGAAGTGGAAGTCCTTAGCTGTGCTCAGCATCGTAATGTTGTTATGTTGATTGGCTTCTGCATTGAGGACAAAAGAAGGTTATTAGTGTATGAATATATCTGCAATGGCTCATTGGATTCTCATCTATATGGACGTCAACGAGATCCACTAGAATGGTCTGCCCGACAAAAAGTTGCTGTTGGGGCTGCTAGAGGACTGCGATATCTCCACGAAGAATGTAGAGTGGGCTGCATTGTTCACCGTGATATGCGACCAAATAACATTCTTGTCACTCATGATTTTGAACCACTGGTTGGGGACTTTGGCCTGGCAAGGTGGCAGCCAGATGGAGATAAGGGTGTGGAAACAAGAGTAATTGGAACTTTTGGGTACTTGGCTCCTGAATACGCACAAAGTGGTCAAATCACAGAAAAGGCGGATGTTTATTCCTTTGGCGTGGTGTTGGTGGAGCTCATTACTGGAAGAAAAGCGGTGGATCTTAACCGACCCAAAGGCCAACAATGTCTCACTGAGTGGGCACGGCCTTTGTTGGAAGATTTAGCCATTGATGATCTAATCGATCCGAGACTGGGGAATGTGTATTCAGAGCATGAAGTTTACTGCATGCTACACGCTGCCTCACTATGCATACGGAGGGATCCCAATGCTCGGCCTCGCATGTCCCAGGTGCTGCGAGTTCTGGAGGGTGACATGGTGATGGATGGAAATTACATTTCAACACCTGGATACGAAGAGGGAAGCCGGAGTGGTAGGATATGGGTGGAACAACAGCAGCACCAACAACGCTGTCACAGCGGTTCGGGTCCCATTTCCATCGAGCCATTAGAGAGGTTCAATGAAAAGCTGTCTCTTGAGAGTTTAAGACAGACTTACATGGAAGGGACGAGGTGA 2238 45.22 MMNLEQKRGKQEKGSDEAEKVVVAVKASKEIPKTALVWALTHVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSHLSASPDQKCNITDSCSQMILQLHDVYDPNKINVKIKIISGSPSGAVAVEAKRAQASWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEPEIISLLGSDPDEGAENNQGKKNQSLNTIRGPLVTPNSSPELGTPFTTTEAGTSSVSSSDPGTSPFFIPEISRDLKKDESLVIKENKELGDTSSDSDCDNLSVSSTSMRFQPWMTEFINAHYQPLQQGSVISNRSDDKPHATTSKTLQQTYSKTDAEAGIRMPKHRNDSDFGGNVREAVSLSRNMPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDKGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLNRPKGQQCLTEWARPLLEDLAIDDLIDPRLGNVYSEHEVYCMLHAASLCIRRDPNARPRMSQVLRVLEGDMVMDGNYISTPGYEEGSRSGRIWVEQQQHQQRCHSGSGPISIEPLERFNEKLSLESLRQTYMEGTR 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 42471649 42475621 - Bda009650.1 Bda12g01075 18090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g01075 745 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Bda12g01075 745 Pfam Protein tyrosine and serine/threonine kinase 410 674 IPR001245 GO:0004672|GO:0006468
Bda12g01075 745 Gene3D Transferase(Phosphotransferase) domain 1 482 686 - -
Bda12g01075 745 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Bda12g01075 745 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g01075 745 PANTHER OS01G0253100 PROTEIN 16 711 IPR045271 GO:0004714|GO:0006468
Bda12g01075 745 CDD USP_Like 20 143 - -
Bda12g01075 745 MobiDBLite consensus disorder prediction 202 249 - -
Bda12g01075 745 SUPERFAMILY Protein kinase-like (PK-like) 390 680 IPR011009 -
Bda12g01075 745 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 711 - -
Bda12g01075 745 Gene3D HUPs 5 180 IPR014729 -
Bda12g01075 745 CDD STKc_IRAK 412 678 - -
Bda12g01075 745 MobiDBLite consensus disorder prediction 187 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00390 Bda-Chr2:44427014 Bda12g01075 Bda-Chr12:42471649 0 dispersed
Bda03g00242 Bda-Chr3:1931658 Bda12g01075 Bda-Chr12:42471649 0 dispersed
Bda03g00245 Bda-Chr3:2212509 Bda12g01075 Bda-Chr12:42471649 6.16E-176 dispersed
Bda12g01075 Bda-Chr12:42471649 Bda07g01515 Bda-Chr7:28206869 8.48E-101 dispersed
Bda13g01465 Bda-Chr13:37551055 Bda12g01075 Bda-Chr12:42471649 1.06E-81 dispersed
Bda12g01075 Bda-Chr12:42471649 Bda11g01113 Bda-Chr11:11007129 1.31E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69980 PF07714 PK_Tyr_Ser-Thr 8.60E-41 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g01075 - - zju:107404004 1203.73