Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda12g01075 | ATGATGAATCTGGAGCAGAAGCGGGGCAAGCAAGAGAAAGGATCGGACGAAGCCGAAAAAGTAGTTGTGGCCGTGAAGGCATCAAAAGAAATCCCTAAGACTGCGTTGGTTTGGGCATTGACTCATGTTGTTCAACCTGGAGATTGCATAACACTTCTTGTAGTTGTCCCCTCGCAAAGCTCTGGTAGAAAATTGTGGGGTTTCCCGAGATTTGCTGGGGATTGTGCCAATGGTCACAAAAAGTCTCATTTAAGTGCAAGCCCGGACCAGAAGTGCAATATTACTGATTCATGCTCCCAGATGATCCTTCAACTTCATGATGTTTACGATCCAAATAAGATAAATGTTAAGATAAAAATTATATCTGGGTCCCCTAGTGGAGCTGTGGCTGTAGAGGCAAAGAGAGCTCAGGCCAGTTGGGTTGTATTAGACAAGCAGCTCAAACATGAGGAGAAGCGATGCATGGAAGAGCTCCAATGCAACATTGTTGTCATGAAGCGTTCCCAGCCAAAAGTTCTTCGCTTGAATTTGGTTGGTTCACCTAAAAAGGAACCCGAAATCATCTCTTTATTAGGTTCTGATCCGGATGAAGGGGCTGAGAATAATCAGGGAAAAAAGAACCAGTCTCTCAATACCATTCGCGGTCCTTTAGTGACTCCAAATAGTAGTCCAGAGCTTGGTACTCCATTTACCACCACGGAAGCTGGAACTTCATCAGTGTCAAGCTCTGATCCGGGGACATCACCTTTTTTCATACCTGAAATTAGTCGAGATCTGAAGAAAGATGAATCATTAGTAATTAAGGAAAACAAAGAACTTGGCGATACAAGTTCAGATTCAGACTGTGACAATTTATCGGTATCTTCAACAAGTATGAGATTCCAACCATGGATGACAGAATTTATAAATGCTCATTATCAACCCTTGCAACAAGGGAGCGTGATATCAAATAGGAGTGATGATAAGCCTCATGCAACAACAAGCAAAACTTTGCAACAAACGTATTCAAAAACTGATGCAGAAGCCGGAATTAGAATGCCAAAACACAGAAATGATTCTGACTTTGGTGGCAACGTAAGGGAAGCAGTCTCGTTGTCCAGAAATATGCCTCTCGGACCCCCTCCACTGTGTTCAATATGCCAACATAAAGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGCTGGAGCTTGCTACTGGCGGATTTTCGCAAGCCAATTTCTTGGCTGAAGGAGGTTTTGGATCAGTTCACAGAGGAGTTCTACCTGATGGTCAAGCAGTTGCGGTCAAGCAACATAAACTGGCCAGTTCTCAAGGAGACCTTGAGTTTTGTTCAGAAGTGGAAGTCCTTAGCTGTGCTCAGCATCGTAATGTTGTTATGTTGATTGGCTTCTGCATTGAGGACAAAAGAAGGTTATTAGTGTATGAATATATCTGCAATGGCTCATTGGATTCTCATCTATATGGACGTCAACGAGATCCACTAGAATGGTCTGCCCGACAAAAAGTTGCTGTTGGGGCTGCTAGAGGACTGCGATATCTCCACGAAGAATGTAGAGTGGGCTGCATTGTTCACCGTGATATGCGACCAAATAACATTCTTGTCACTCATGATTTTGAACCACTGGTTGGGGACTTTGGCCTGGCAAGGTGGCAGCCAGATGGAGATAAGGGTGTGGAAACAAGAGTAATTGGAACTTTTGGGTACTTGGCTCCTGAATACGCACAAAGTGGTCAAATCACAGAAAAGGCGGATGTTTATTCCTTTGGCGTGGTGTTGGTGGAGCTCATTACTGGAAGAAAAGCGGTGGATCTTAACCGACCCAAAGGCCAACAATGTCTCACTGAGTGGGCACGGCCTTTGTTGGAAGATTTAGCCATTGATGATCTAATCGATCCGAGACTGGGGAATGTGTATTCAGAGCATGAAGTTTACTGCATGCTACACGCTGCCTCACTATGCATACGGAGGGATCCCAATGCTCGGCCTCGCATGTCCCAGGTGCTGCGAGTTCTGGAGGGTGACATGGTGATGGATGGAAATTACATTTCAACACCTGGATACGAAGAGGGAAGCCGGAGTGGTAGGATATGGGTGGAACAACAGCAGCACCAACAACGCTGTCACAGCGGTTCGGGTCCCATTTCCATCGAGCCATTAGAGAGGTTCAATGAAAAGCTGTCTCTTGAGAGTTTAAGACAGACTTACATGGAAGGGACGAGGTGA | 2238 | 45.22 | MMNLEQKRGKQEKGSDEAEKVVVAVKASKEIPKTALVWALTHVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSHLSASPDQKCNITDSCSQMILQLHDVYDPNKINVKIKIISGSPSGAVAVEAKRAQASWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEPEIISLLGSDPDEGAENNQGKKNQSLNTIRGPLVTPNSSPELGTPFTTTEAGTSSVSSSDPGTSPFFIPEISRDLKKDESLVIKENKELGDTSSDSDCDNLSVSSTSMRFQPWMTEFINAHYQPLQQGSVISNRSDDKPHATTSKTLQQTYSKTDAEAGIRMPKHRNDSDFGGNVREAVSLSRNMPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDKGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLNRPKGQQCLTEWARPLLEDLAIDDLIDPRLGNVYSEHEVYCMLHAASLCIRRDPNARPRMSQVLRVLEGDMVMDGNYISTPGYEEGSRSGRIWVEQQQHQQRCHSGSGPISIEPLERFNEKLSLESLRQTYMEGTR | 745 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 42471649 | 42475621 | - | Bda009650.1 | Bda12g01075 | 18090 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda12g01075 | 745 | Gene3D | Phosphorylase Kinase; domain 1 | 378 | 481 | - | - | |
Bda12g01075 | 745 | Pfam | Protein tyrosine and serine/threonine kinase | 410 | 674 | IPR001245 | GO:0004672|GO:0006468 | |
Bda12g01075 | 745 | Gene3D | Transferase(Phosphotransferase) domain 1 | 482 | 686 | - | - | |
Bda12g01075 | 745 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 527 | 539 | IPR008266 | GO:0004672|GO:0006468 | |
Bda12g01075 | 745 | ProSiteProfiles | Protein kinase domain profile. | 406 | 682 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda12g01075 | 745 | PANTHER | OS01G0253100 PROTEIN | 16 | 711 | IPR045271 | GO:0004714|GO:0006468 | |
Bda12g01075 | 745 | CDD | USP_Like | 20 | 143 | - | - | |
Bda12g01075 | 745 | MobiDBLite | consensus disorder prediction | 202 | 249 | - | - | |
Bda12g01075 | 745 | SUPERFAMILY | Protein kinase-like (PK-like) | 390 | 680 | IPR011009 | - | |
Bda12g01075 | 745 | PANTHER | KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN | 16 | 711 | - | - | |
Bda12g01075 | 745 | Gene3D | HUPs | 5 | 180 | IPR014729 | - | |
Bda12g01075 | 745 | CDD | STKc_IRAK | 412 | 678 | - | - | |
Bda12g01075 | 745 | MobiDBLite | consensus disorder prediction | 187 | 252 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00390 | Bda-Chr2:44427014 | Bda12g01075 | Bda-Chr12:42471649 | 0 | dispersed | |
Bda03g00242 | Bda-Chr3:1931658 | Bda12g01075 | Bda-Chr12:42471649 | 0 | dispersed | |
Bda03g00245 | Bda-Chr3:2212509 | Bda12g01075 | Bda-Chr12:42471649 | 6.16E-176 | dispersed | |
Bda12g01075 | Bda-Chr12:42471649 | Bda07g01515 | Bda-Chr7:28206869 | 8.48E-101 | dispersed | |
Bda13g01465 | Bda-Chr13:37551055 | Bda12g01075 | Bda-Chr12:42471649 | 1.06E-81 | dispersed | |
Bda12g01075 | Bda-Chr12:42471649 | Bda11g01113 | Bda-Chr11:11007129 | 1.31E-101 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69980 | PF07714 | PK_Tyr_Ser-Thr | 8.60E-41 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda12g01075 | - | - | zju:107404004 | 1203.73 |