Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g01091 ATGGAGTTGCAGCGATTTCTAATCCTTTCCTTCCTTGCTGCTTTTCCTCTCCTTGCGCTTGTCCGTGGCCAGAGTCAGTCAGGTTTCATCAGCATAGATTGCGGTCTTCCAGGCAACTCGAGCTACAGAGAACCCCTCACCGGCCTAACCTACGTCTCAGATTCAGCCTACATCGACACTGGAGAACCCAGAAATGTTTCTGATGATTTCATGACACCCACTCTTCAACTGCAGCTCGCCACTGTTAGAACTTTTCCTCAAGGAACCAGAAACTGCTATAAAGTAAATGTGAAAGTGGGCACCCGGTATCTCATCCGAGCAAGCTTTCTGTACGCCAATTTTGATGGAAAAAACACCACGCCTTCCTCATTTGATCTTCATTTCGGACCTAATTACTGGGCTACTGTGGCTTTACCAAGAGTAGCTGCTATCCAACACGAGGAAATTATCCATATTTCCGATTCAAGTTATGCACAAGTCTGTCTCGTAAACACTGGATCTGGAACTCCATTTATATCATCTCTAGAGTTCAGACCTCTCCGGAACGACACCTATAGCAATCTCACTCTATCACTGCAATTATTCTTGCGACTTGACGTTGGCTCCAACAGCCCGGCTTACAGGTACCCATTTGATGTTTATGATCGAGTGTGGACTCCGGCAGCATTACGTACAGACTGGACGACTATTAATACTTCATCGACAATAGCTGTGGACGACCCTCTCGGCTACATTCCACCGTCTGTGGTGATGAGTACAGCTTCAACGCCATTAGACACAAGCGCTACGTCTATGGATTTCAACATTCAGACCGAAGATCCAAATTCTCGATGTGTTGTGTACTTGTACTTCGCAGAAATTGTGCAGCTCCAAACCAACCAGTCAAGATCATTTAATATTTTTATGAATGGAGCTCTTTTATTAAATCAAATTTTTTCTCCTGTTAACTTCTCTGAAACCGTGGTCTACACCCGTAACCCTGTTTCTAACAACACTTTTATGTTTTCACTCAAAAGTACTCCCACCTCTACCCTTCCGCCACTCCTCAATGCCTTGGAGATTTACTCTGTTCTGAATTTACCAAACTCTGCAACTGGTCAAGAGGACGTTGATGCCATCACCGGCATTAAGTCTACTTATGGAGTAGTGAAAAACTGGCAGGGAGATCCCTGTGCTCCGGAAGAATATGTCTGGCAAGGTGTTACCTGTAATTCCAATAGAATTACATCCTTGGACCTTTCGTCTAGCGGATTGACGGGTGAAATATCGCTCGATATTTTGAATCTCAAAATGCTTGATACCCTGGATCTGTCAAACAATGACTTAACTGGATCAGTTCCTGATTTTCTCTCTCAACTGCCGCAGCTGAAAGTTCTAAACTTGGCGAAGAACAACCTTTCGGGCTCTGTTCCTGCTTCCCTTACTGAGAAGTCAAATAGTGGTGGCCTGTCCCTAAATCTGGGCGACAATCCAAATTTATCGACAACCACAACTCCAAGCTCGGGAAAGAAGAGCAGCAATGTTGTGGTTGCAGTTGTAGCGTCAATTGTTGGAGTCATTGCCTTGGTTATTATAGTTCTAGGCGTGCTCTTTTGGCTGAGAAGAAGGAACGAGCAAAGGGGAGCTGCAGCAGGAAGGGTGGAAATGGAACCAGGTAAGCACCAAGCTGAACCGTGGGAGATGAAGAAACATCAATATTCATATTCAGAAGTGGTGACAATGACCAACAACTTCAAGAGAGTGCTCGGAGAAGGAGGGTTCGGAAAAGTTTATTACGGCCAGATCGCAGATGATGACACCGAAGTTGCTGTCAAAATGCTCTCTCTCTCTTCAAGTCAAGGCTACCAGCAATTTCAGGCTGAGGTGGAACTTCTCATGAGAGTTCATCATAGAAACTTGATCAGCCTTGTTGGGTACTGCAATGAAGGGCCTCATATGGGGCTCATCTACGAATACATGAGCAGAGGAAATCTAGGATCTCTGTTAGCTGATGAAAAGGCGGGTTTGCTGTCATGGGAAAAAAGACTGCACATAGCACTGGATGCAGCGCTAGGATTGGAGTATCTGCATAATGGTTCCAGGCCAGCCATGGTGCACAGAGATGTCAAGTGTGCAAACATCTTGCTAAATGACATTTTCCAAGCAAAACTTGCTGATTTCGGTCTTTCTCGTTCGTTTCCAACTGAGGGTGGCGCCACTCATATCACCACCAATGTCGTTGGAACTCCGGGCTACCTCGATCCCGAGTACTACGTATCATATAGATTAAACGAGAAGAGCGACATTTATAGCTTCGGAATCGTGATCCTGGAAATCGTGACTGGACGGCCGGTTCTTGTGAAGAATCACGAGAAGAGTCACATAACTCAATGGGTGGATTTCATGCTGAGTCAAGGAGACATAAGCACCATAATAGATCCAAGAATGAAGATGGATTATGACGTGAACTCAATTTGGAAAGCTGTTGAAGTTGCAATGTCATCAGCTTCTCATAGCTCTGCAGGAAGACCAACCATGAGCGAGGTGGTCAAGGAGCTCAAGGAGTGTCTGGACATAGAGATAGCCAACAAAGCTGGTACCACCCAATCAACTGCTTCCTTCAACAGCAACTTGGCTTCTGGATTTGGCCCCGTTGCAAGGTAG 2643 45.52 MELQRFLILSFLAAFPLLALVRGQSQSGFISIDCGLPGNSSYREPLTGLTYVSDSAYIDTGEPRNVSDDFMTPTLQLQLATVRTFPQGTRNCYKVNVKVGTRYLIRASFLYANFDGKNTTPSSFDLHFGPNYWATVALPRVAAIQHEEIIHISDSSYAQVCLVNTGSGTPFISSLEFRPLRNDTYSNLTLSLQLFLRLDVGSNSPAYRYPFDVYDRVWTPAALRTDWTTINTSSTIAVDDPLGYIPPSVVMSTASTPLDTSATSMDFNIQTEDPNSRCVVYLYFAEIVQLQTNQSRSFNIFMNGALLLNQIFSPVNFSETVVYTRNPVSNNTFMFSLKSTPTSTLPPLLNALEIYSVLNLPNSATGQEDVDAITGIKSTYGVVKNWQGDPCAPEEYVWQGVTCNSNRITSLDLSSSGLTGEISLDILNLKMLDTLDLSNNDLTGSVPDFLSQLPQLKVLNLAKNNLSGSVPASLTEKSNSGGLSLNLGDNPNLSTTTTPSSGKKSSNVVVAVVASIVGVIALVIIVLGVLFWLRRRNEQRGAAAGRVEMEPGKHQAEPWEMKKHQYSYSEVVTMTNNFKRVLGEGGFGKVYYGQIADDDTEVAVKMLSLSSSQGYQQFQAEVELLMRVHHRNLISLVGYCNEGPHMGLIYEYMSRGNLGSLLADEKAGLLSWEKRLHIALDAALGLEYLHNGSRPAMVHRDVKCANILLNDIFQAKLADFGLSRSFPTEGGATHITTNVVGTPGYLDPEYYVSYRLNEKSDIYSFGIVILEIVTGRPVLVKNHEKSHITQWVDFMLSQGDISTIIDPRMKMDYDVNSIWKAVEVAMSSASHSSAGRPTMSEVVKELKECLDIEIANKAGTTQSTASFNSNLASGFGPVAR 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 42635243 42638926 + Bda009667.1 Bda12g01091 18106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g01091 880 PRINTS Leucine-rich repeat signature 453 466 - -
Bda12g01091 880 PRINTS Leucine-rich repeat signature 432 445 - -
Bda12g01091 880 Gene3D Transferase(Phosphotransferase) domain 1 653 870 - -
Bda12g01091 880 Pfam Protein tyrosine and serine/threonine kinase 578 846 IPR001245 GO:0004672|GO:0006468
Bda12g01091 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Bda12g01091 880 SUPERFAMILY L domain-like 396 479 - -
Bda12g01091 880 Pfam Malectin-like domain 32 357 IPR024788 -
Bda12g01091 880 MobiDBLite consensus disorder prediction 472 503 - -
Bda12g01091 880 PANTHER PUTATIVE-RELATED 17 864 - -
Bda12g01091 880 SUPERFAMILY Protein kinase-like (PK-like) 559 850 IPR011009 -
Bda12g01091 880 ProSiteProfiles Protein kinase domain profile. 576 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g01091 880 PANTHER OS07G0107800 PROTEIN-RELATED 17 864 - -
Bda12g01091 880 Gene3D Phosphorylase Kinase; domain 1 563 652 - -
Bda12g01091 880 ProSitePatterns Protein kinases ATP-binding region signature. 582 605 IPR017441 GO:0005524
Bda12g01091 880 Gene3D Ribonuclease Inhibitor 371 492 IPR032675 -
Bda12g01091 880 SMART serkin_6 576 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g01091 880 Gene3D - 191 357 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00895 Bda12g01091 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01735 Bda-Chr3:56779740 Bda12g01091 Bda-Chr12:42635243 1.54E-138 dispersed
Bda12g01091 Bda-Chr12:42635243 Bda14g01313 Bda-Chr14:14613964 1.67E-110 dispersed
Bda12g01091 Bda-Chr12:42635243 Bda12g01092 Bda-Chr12:42670307 0 tandem
Bda01g02093 Bda-Chr1:57071314 Bda12g01091 Bda-Chr12:42635243 1.42E-18 transposed
Bda04g00912 Bda-Chr4:58891441 Bda12g01091 Bda-Chr12:42635243 0 transposed
Bda10g00843 Bda-Chr10:42829620 Bda12g01091 Bda-Chr12:42635243 8.68E-115 transposed
Bda11g01074 Bda-Chr11:10483279 Bda12g01091 Bda-Chr12:42635243 2.60E-27 transposed
Bda12g01083 Bda-Chr12:42534619 Bda12g01091 Bda-Chr12:42635243 6.62E-85 wgd
Bda12g01091 Bda-Chr12:42635243 Bda04g00895 Bda-Chr4:58695157 1.08E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69982 PF12819 Malectin_like 3.80E-108 CL0202 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g01091 - - bhj:120079735 888.641