Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g01092 ATGAAGAAATATCAATATTCATACTCAAAAGTCGTGACAATGACCAACAACTTCAAGAGAGTGCTCGGAGAAGGAGGGTTCGGAAAGGTTTATTACGGCCAGATTGCAGATGATGACACCGAAGTTGCTGTCAAAATGCTCTCTCTATCTTCAAGTCAAGGCTACCAGCAATTTCAGGCTGAGGTGGAACTTCTCATGAGAGTTCATCATAGAAACTTGATCAGCCTTGTTGGGTACTGCAATGAAGGGCCTCATATGGGGCTCATCTACGAATACATGAGCAGAGGAAATCTAGGATCTCTGTTAGCTGATGAAAAGGCGGGCTTGCTGTCGTGGGAAAAGAGACTGCACATAGCACTGGATGCAGCGCTAGGATTGGAGTATCTGCATAATGGTTCCACGCCAGCCATGGTGCACAGAGATGTCAAGTGTGCAAACATCTTGCTAAATGACATTTTCCAAGCAAAACTTGCTGATTTCGGTCTTTGTCGATCATTTCCAACCGAGGGTGGCGCCACTCATATCACCACCAATGTCGTTGGAACTCCGGGCTACCTCGATCCCGAGTACTACGTATCATATAGATTAAACGAGAAGAGCGACATTTATAGCTTTGGAATCGTGATCCTAGAAATCGTGACTGGACGGCCGGTTCTTATGAAAAATCATGAGAAGTGTCACATAACTCAATGGGTGGATTTCATGCTGAGTCAAGGCGACATAAGCACCATAATAGATGCAAGAATGAAGATGGATTATGACGTCAACTCAATTAGGAAAGCTATTGAAGTTGCAATGTCATCAGCTTCTCATAGCTCTGCAGGAAGACCAACCATGAGCGAGGTGGTCAAGGAGCTCAAGGAGTGTCTGGACATAGAGATAGCCAACAAAGCTGGTACTTGA 903 44.96 MKKYQYSYSKVVTMTNNFKRVLGEGGFGKVYYGQIADDDTEVAVKMLSLSSSQGYQQFQAEVELLMRVHHRNLISLVGYCNEGPHMGLIYEYMSRGNLGSLLADEKAGLLSWEKRLHIALDAALGLEYLHNGSTPAMVHRDVKCANILLNDIFQAKLADFGLCRSFPTEGGATHITTNVVGTPGYLDPEYYVSYRLNEKSDIYSFGIVILEIVTGRPVLMKNHEKCHITQWVDFMLSQGDISTIIDARMKMDYDVNSIRKAIEVAMSSASHSSAGRPTMSEVVKELKECLDIEIANKAGT 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 42670307 42671552 + Bda009668.1 Bda12g01092 18107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g01092 300 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 2 297 - -
Bda12g01092 300 ProSiteProfiles Protein kinase domain profile. 16 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g01092 300 SUPERFAMILY Protein kinase-like (PK-like) 4 288 IPR011009 -
Bda12g01092 300 PIRSF ILK 10 298 - -
Bda12g01092 300 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bda12g01092 300 PANTHER OS07G0107800 PROTEIN-RELATED 2 297 - -
Bda12g01092 300 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda12g01092 300 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Bda12g01092 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Bda12g01092 300 Gene3D Transferase(Phosphotransferase) domain 1 93 298 - -
Bda12g01092 300 Pfam Protein tyrosine and serine/threonine kinase 18 286 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda10g00843 Bda12g01092 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00895 Bda-Chr4:58695157 Bda12g01092 Bda-Chr12:42670307 1.41E-54 dispersed
Bda12g01083 Bda-Chr12:42534619 Bda12g01092 Bda-Chr12:42670307 2.16E-168 dispersed
Bda12g01092 Bda-Chr12:42670307 Bda03g01735 Bda-Chr3:56779740 7.26E-77 dispersed
Bda12g01091 Bda-Chr12:42635243 Bda12g01092 Bda-Chr12:42670307 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69983 PF07714 PK_Tyr_Ser-Thr 2.30E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g01092 - - csv:101215225 409.068