Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda12g01113 ATGGCTTTGGCTGGTGTGTTCTCGCCATTCCTGGCCATGGTTCTTTTGCAAGCTGGGTATGCCTTCATGAACATTACTTCTAAGCTTGCTATGGAGTCTGGTATGAACCCACTCGTTCTCGTTGCTTACCGCCAGATGTTTGCCACACTAGCCATTGCTCCTTTTGCTTTTTTCCTGGAGAGGAAGACGAGACCCGAGATTACAATGCCTATTCTTCGCCAAATTCTGCTGTGCTCCTTAACTGGGGCAACTGGAAACCAAGTGTTGTACTTTCTTGGGTTAGAGTATTCAACTCCAACGATTGCATGTGCATTGAGCAACATACTCCCAGCAGCCACTTTTATTCTTGCTTTGCTTTTCGGACAAGAATCACTAGGAATAAGGACGAGGGCAGGGGTGGCGAAGGTCGCGGGGACAATTGTGTGTGTGAGCGGAGCAATGTTGCTGTCTTTCTACCACGGCCACATAATCAACTTAGGTGAATCCAGAGTTCATTGGCACTATGCCGACAAAATGGAGAATACAAGTTCTGGCCCTCGGCCCAACCAAATACTGGGCTCCATCTTGCTGCTTGTTAGCTCGGTTGCATGGGCAGGATGGTTTGTAATACAAGCTAGAGTGAATGAAAAGTTTCCAGCTCCTTACACGAGCACCGCTTTGATGTGCGCTATGGCCACAATTCAGTGCGGGGCCATTGCTGGGGGCGTCGAGCACAACATCTCTGCGTGGTCTTTGGGAAGCCCCATCAGGCTTGTTGGAGCCCTTTACGCTGGAATAGTTTGTTCAGGAATAGCTTATTGCGTCACTACCTGGTGCATTCAGAGAGAAGGCCCTCTTTACGCCTCCGTGTTCAATCCATTATTGCTTGTCATCGTCGCCATATTTAGCTGGTTCTTGCTCCATGAAAAATTATACGTGGGAACTGCCGTAGGATCTCTTTTGATCGTGTTGGGGCTCTACGCAGTTTTGTGGGGAAAGAACAAAGAAACGAAAGCTCTAAGGAACACAAAAATAATGGCAATGAGGAAACTGGAAGAAGGGATTGATGGGGGCGAGAAGGGTGAAGTGGAATGGTACATTTACAAATCCTCAAAACCTAATCAGGGCACTACTGCTATAGACTGA 1125 47.82 MALAGVFSPFLAMVLLQAGYAFMNITSKLAMESGMNPLVLVAYRQMFATLAIAPFAFFLERKTRPEITMPILRQILLCSLTGATGNQVLYFLGLEYSTPTIACALSNILPAATFILALLFGQESLGIRTRAGVAKVAGTIVCVSGAMLLSFYHGHIINLGESRVHWHYADKMENTSSGPRPNQILGSILLLVSSVAWAGWFVIQARVNEKFPAPYTSTALMCAMATIQCGAIAGGVEHNISAWSLGSPIRLVGALYAGIVCSGIAYCVTTWCIQREGPLYASVFNPLLLVIVAIFSWFLLHEKLYVGTAVGSLLIVLGLYAVLWGKNKETKALRNTKIMAMRKLEEGIDGGEKGEVEWYIYKSSKPNQGTTAID 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 43203493 43205459 - Bda009700.1 Bda12g01113 18128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda12g01113 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Bda12g01113 374 PANTHER WAT1-RELATED PROTEIN 8 336 - -
Bda12g01113 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 143 - -
Bda12g01113 374 Pfam EamA-like transporter family 11 148 IPR000620 GO:0016020|GO:0016021
Bda12g01113 374 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Bda12g01113 374 PANTHER WAT1-RELATED PROTEIN 8 336 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00915 Bda-Chr7:10730104 Bda12g01113 Bda-Chr12:43203493 8.50E-85 dispersed
Bda12g01113 Bda-Chr12:43203493 Bda14g00333 Bda-Chr14:2320587 2.19E-90 dispersed
Bda12g01113 Bda-Chr12:43203493 Bda01g00511 Bda-Chr1:32098394 9.16E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda12g01113 - - csv:101215353 474.167