Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00006 ATGGTGGTCGAAGATAGCGAGAGCTCTGGAAGCATAGTGCAAGACGTTACATCGCTTACTCACAGCCGCAAACATCGTCAGAAGTTCGAGGTTTATAATGAGGTTCTCCGTCGCCTTCAGGATTCCGACAGCGACGAGGTTGTTCAGGCTGGATTTAAAGAGGAGCTACTGGCTCACTTTAATCGTCTCCCCACTCGATATGCAATGGATGTGAACGTGGAGAGGGCGGAAGATGTTCTTATGCACAAAAGATTGTTACATATGGCTCATGATCCTTTTAATCGACCGGCAATCGATGTACGCGTAGTACAGGTTTATTCTATTTCTGATGAAGATTTGACGGAGGATATAAAGTGTGATCCAAGTAAGGGTGCCGCTCAAAGACGTCGCATGCATCCTCCACCTGCCTTTGGTTCATCTGCTAACTTTGAAGTCCTTGCACCCGAAAGTGGAAAATCTCATGAACAGGATGAGGATCACTCTGTCCATGCCAATGCATATTTTTGCAGGCTCATGCATGAGATAACCTTCTCAACAGATGACAAACCAAAACGCCTTAGTCAGTTAACTTCCTTGCTAGCTGAGATTGGGCTTAACATCCAAGAGGCACATGCATTTTCTACGGTGGATGGATATTCCTTGGACGTCTTTCTTGTTGATGGATGGCCTTATGAGGAAACCCAGCATTTGAGAATTGCATTGAATAAGGAAGTCTCAAAGATTCAGGGAAAGGATCAGTCAAAACATCAAATAACATATCACCTAGGCGAGGATAAAGATTTGGAGCCTAACCCTGGACTCGATTATGTGACAATACCATCAGACGGAGCTGATGTATGGGAAATTGATCATAAACATTTGAAGTTTGAGAAAATAGTAGCTTCTGGGACATATGGTGACCTGTATAAGGGTACATATCATAGTCAAGAAGTGGCAATAAAAATTCTCAAGCCTGAGCATGTAACTGTAGAAATGCAGCGAGAGTTTGCACAAGAAGTCTTTATTATGAGAAAAGTTCGGCACAAGAATGTTGTACAGTTTATTGGTGCATGTACTAAGTCTCCAAACCTATGCATAGTTACAGAATTTATGTCTGGTGGAAGTTTGTATGACTATTTACATAAACAAAATGGTGTGTTTAAGCTTCCATCTCTGGTCAAGGTAGCAATTGATATCTCAAAGGGAATGAACTACTTGCACCAAAATAACATAATCCACAGAGATTTGAAGGGCCCCAATCTTTTGATGGATGAAAATGAATTGATTAAGGTGGCTGATTTTGGGGTCGCCAGAGTAAAAGCTCAATCTGGTGTTATGACAGCAGAAACAGGCACATACCGCTGGATGGCTCCTGAGGTTATAGAGCACAAGCCATATGATCACAAGGCTGATGTATTCAGTTTTGGCATCGTTTTGTGGGAGTTACTTACTGGCAAGCTTCCCTATGAATTCTTAACCCCATTACAAGCTGCCGTTGGAGTGGTCCAAAAGGGTTTAAGGCCTACAATTCCAAAACACACGCATCCAAAGCTTACTGGGTTGCTGGAGCAATGCTGGCAGCAGGACCCAGCAATGAGACCTGACTTCTCCGAAATTATATCTATTTTGCAGAAAATAGCCAAAGAGGTTGGAAACGAAGGGGAGGAGCGCCGGAAGGAGAAAACTCCCGGACGATTCTTCTCTGCCCTGAGACGTGGTCATTATTGA 1707 43.29 MVVEDSESSGSIVQDVTSLTHSRKHRQKFEVYNEVLRRLQDSDSDEVVQAGFKEELLAHFNRLPTRYAMDVNVERAEDVLMHKRLLHMAHDPFNRPAIDVRVVQVYSISDEDLTEDIKCDPSKGAAQRRRMHPPPAFGSSANFEVLAPESGKSHEQDEDHSVHANAYFCRLMHEITFSTDDKPKRLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFLVDGWPYEETQHLRIALNKEVSKIQGKDQSKHQITYHLGEDKDLEPNPGLDYVTIPSDGADVWEIDHKHLKFEKIVASGTYGDLYKGTYHSQEVAIKILKPEHVTVEMQREFAQEVFIMRKVRHKNVVQFIGACTKSPNLCIVTEFMSGGSLYDYLHKQNGVFKLPSLVKVAIDISKGMNYLHQNNIIHRDLKGPNLLMDENELIKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTHPKLTGLLEQCWQQDPAMRPDFSEIISILQKIAKEVGNEGEERRKEKTPGRFFSALRRGHY 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 49226 60666 - Bda000845.1 Bda13g00006 18137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00006 568 ProSiteProfiles ACT domain profile. 174 246 IPR002912 -
Bda13g00006 568 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 15 549 - -
Bda13g00006 568 CDD STKc_MAP3K-like 293 536 - -
Bda13g00006 568 Gene3D Phosphorylase Kinase; domain 1 277 365 - -
Bda13g00006 568 PRINTS Tyrosine kinase catalytic domain signature 507 529 IPR001245 GO:0004672|GO:0006468
Bda13g00006 568 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Bda13g00006 568 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Bda13g00006 568 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Bda13g00006 568 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Bda13g00006 568 SMART serkin_6 287 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00006 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Bda13g00006 568 Gene3D Transferase(Phosphotransferase) domain 1 366 559 - -
Bda13g00006 568 MobiDBLite consensus disorder prediction 118 141 - -
Bda13g00006 568 CDD ACT_TyrKc 172 238 - -
Bda13g00006 568 SUPERFAMILY Protein kinase-like (PK-like) 274 536 IPR011009 -
Bda13g00006 568 SUPERFAMILY ACT-like 173 236 IPR045865 -
Bda13g00006 568 ProSiteProfiles Protein kinase domain profile. 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00006 568 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 549 - -
Bda13g00006 568 Pfam Protein tyrosine and serine/threonine kinase 287 536 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00467 Bda-Chr6:6719315 Bda13g00006 Bda-Chr13:49226 0 dispersed
Bda13g00006 Bda-Chr13:49226 Bda15g01020 Bda-Chr15:19128759 0 dispersed
Bda13g00006 Bda-Chr13:49226 Bda05g00905 Bda-Chr5:57553100 2.68E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69984 PF07714 PK_Tyr_Ser-Thr 2.80E-74 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00006 - - gra:105785946 840.876