Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g00026 | CTTGAGCTCTCGAATTCTAATTTCCCAATTCCCAAATCCTCGTCACAATTAACTACATTCAGTAATTTAAGCGTTTTGACCTGTTTTGTTACGTCCGACAGGGGGGAAGAGGGGGAGGACCTGAAATCAAATGAGCACGCAGTTGAGGACCCAGAGGAGATTGCTTCAATGGTTGACTTGAGTATCCGAAACAGCTCAGAAAGGAGGAACCTTGGGTTTTTCTCCTGTGGAACAGGAAACCCAATCGACGACTGCTGGCGCTGCGATCCAAACTGGCACCTTAACAGGAAACGGCTGGCCGATTGCAGTATCGGCTTCGGGAGGAACGCTATCGGAGGCCGTGACGGCAGTTTCTATGTGGTCACAGATCCAGGCGACGATGATCCTGTCAACCCAAAGATCGGAACACTGCGGCATGCGGTCATCCAAGATAGCCCTCTCTGGATCATATTCAAACGAGACATGGTGATTCGATTGAAACAGGAGTTAATCGTTAATAGTTTCAAGACCATTGATGGGCGTGGAGCTGATGTGCATATAGCTAACGGGGCATGCATTACCATCCAGTTTGTGACCAACGTCATTGTCCATGGTCTCTCCATCCATGATTGTAAACCTACAGGGAATGCTATGGTTAGAAGCTCTGAAACCCATGTGGGATGGAGGACAATGGCGGATGGTGATGCCATTTCCATTTTTGGGTCCAGCCACGTTTGGATCGATCACAATTCACTTTCTAGTTGTACTGATGGTCTTGTTGATGCCATTATGGGTTCCACTGCCATTACAATCTCCAATAATCACTTCAGCAACCACAATGAGGTGATGCTTTTGGGACACAGTGATACGTACACGAGAGACAAGCAGATGCAAGTGACCATTGCTTACAACCATTTCGGAGAGGGACTTATCCAAAGAATGCCGAGGTGCCGACACGGGTACTTTCATGTGGTGAACAACGACTACACTCATTGGGAGATGTATGCGATAGGTGGGAGTGCAGACCCAACCATCAACAGTCAGGGCAATAGATATGCAGCTCCAACCAACCCATTTGCCAAGGAGGTAGTGACGAAGAGGGTTGAAACAGAGGAAAGCGAGTGGAAGGGGTGGAATTGGAGATCAGAGGGAGATATGTTGCTGAATGGAGCCTACTTTACCGCATCTGGTTTTGGAGCTTCATCCAGCTACGCCAGGGCCTCAAGCTTAGGAGCCAAACCTTCTTCTATGGTGGGCTTCATAACATCTGCTGCTGGGGCTCTTTCTTGCGTCAAAGGCAACCCCTGC | 1287 | 48.72 | LELSNSNFPIPKSSSQLTTFSNLSVLTCFVTSDRGEEGEDLKSNEHAVEDPEEIASMVDLSIRNSSERRNLGFFSCGTGNPIDDCWRCDPNWHLNRKRLADCSIGFGRNAIGGRDGSFYVVTDPGDDDPVNPKIGTLRHAVIQDSPLWIIFKRDMVIRLKQELIVNSFKTIDGRGADVHIANGACITIQFVTNVIVHGLSIHDCKPTGNAMVRSSETHVGWRTMADGDAISIFGSSHVWIDHNSLSSCTDGLVDAIMGSTAITISNNHFSNHNEVMLLGHSDTYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYAAPTNPFAKEVVTKRVETEESEWKGWNWRSEGDMLLNGAYFTASGFGASSSYARASSLGAKPSSMVGFITSAAGALSCVKGNPC | 429 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 467230 | 469267 | + | Bda032829 | Bda13g00026 | 18157 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g00026 | 429 | SUPERFAMILY | Pectin lyase-like | 57 | 423 | IPR011050 | - | |
Bda13g00026 | 429 | SMART | amb_all | 154 | 351 | IPR002022 | - | |
Bda13g00026 | 429 | PRINTS | Pollen allergen Amb family signature | 328 | 347 | IPR018082 | - | |
Bda13g00026 | 429 | PRINTS | Pollen allergen Amb family signature | 226 | 247 | IPR018082 | - | |
Bda13g00026 | 429 | PRINTS | Pollen allergen Amb family signature | 400 | 423 | IPR018082 | - | |
Bda13g00026 | 429 | PRINTS | Pollen allergen Amb family signature | 371 | 395 | IPR018082 | - | |
Bda13g00026 | 429 | PRINTS | Pollen allergen Amb family signature | 162 | 178 | IPR018082 | - | |
Bda13g00026 | 429 | PRINTS | Pollen allergen Amb family signature | 102 | 119 | IPR018082 | - | |
Bda13g00026 | 429 | PRINTS | Pollen allergen Amb family signature | 126 | 151 | IPR018082 | - | |
Bda13g00026 | 429 | PRINTS | Pollen allergen Amb family signature | 306 | 325 | IPR018082 | - | |
Bda13g00026 | 429 | PANTHER | PECTATE LYASE 18-RELATED | 36 | 425 | IPR045032 | GO:0030570 | |
Bda13g00026 | 429 | Gene3D | - | 79 | 422 | IPR012334 | - | |
Bda13g00026 | 429 | PANTHER | PECTATE LYASE | 36 | 425 | - | - | |
Bda13g00026 | 429 | Pfam | Pectate lyase | 160 | 343 | IPR002022 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda12g00688 | Bda-Chr12:33372667 | Bda13g00026 | Bda-Chr13:467230 | 0 | dispersed | |
Bda13g00026 | Bda-Chr13:467230 | Bda14g00785 | Bda-Chr14:6062290 | 0 | dispersed | |
Bda13g00026 | Bda-Chr13:467230 | Bda05g00882 | Bda-Chr5:57283467 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g00026 | K01728 | - | jre:108995893 | 710.679 |