Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00031 ATGGATTCTCCCCCATGTTCTTCCCAACTCACACTCCTTTTTGGCCTCAACCTCACCGACCCTGCTGCTGCCGCCGCTTTCATCTGTGACAACTTTTCCGACACCCGCTATGCCGTCGACACCACCTACCTTCTCTTCTCCGCCTACCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGTGCTGGCTCTGTCCGGGCTAAAAACACCATGAACATCATGCTCACTAACGTTCTCGACGCTGCCGCCGGTGGTATATTCTACTATCTTTTCGGTTACGCTTTCGCCTTTGGATCCCCCTCCAATGGCTTCATTGGCCGCCACTTTTTTGCCCTCAAATCATTCCCCTCCCCCTCCTCAGACTACAGTAACTTTCTCTACCAATGGGCTTTTGCAATCGCCGCTGCCGGGATCACCAGCGGCTCTATCGCCGAACGCACGCAGTTCGTTGCTTACATTGAGGCAAAAGCATCCAATATCTATCCAAAGGATCCTGAATTTCCTTCATGTGGTGTAGATGATATGACAAAATTGGCTTATCTGCACGAGCCAGGGCTTTTACAAAATTTAAAGTCTCGTTATGATATAAATGAAATATATACTTACACTGGGAATATATTGATAGCTGTTAATCCTTTTCGGAGGCTACCTCATTTATACAACAATCACATGATGGAACAGTATAAAGGGGCAGCTCTTGGAGAGCTAAGCCCACATCCTTTTGCCATTGCAGATTCTGCATACAGATTGATGATCAATGAAGGCACAAGTCAGTCAATTTTGGTCAGTGGGGAGAGTGGAGCTGGAAAGACAGAGAGTACGAAGATGCTTATGCATTATCTTGCATTTATGGGAGGGAGAGCTGGAGGAAAAAGTGCAACGGAAGGCCGATCGGTTGAGCAACAAGTATTAGAGTCAAATCCTGTTTTGGAAGCATTTGGTAATGCAAAGACAGTAAGAAACAATAATTCGAGTCGTTTTGGTAAATTTGTGGAGATTCAGTTTGATAAAAGAGGAAGAATATCTGGAGCTGCTATCAGAACTTATTTGCTAGAAAGATCGCGTGTTTGCCAAGTTTCAGATCCAGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCCGCGCCAAAAGAGGATATTGAAAGATACAGACTTGGGAATCCAAAAACATTTCATTACCTTAATCAATCTAATTGCTACAATCTGGATGGTGTGGATGATTCTAAGGAATACCTGGTCACCAGGAATGCCATGGACGTAGTTGGAATAAATTCTGATGAGCAGGATGCAATATTCCGAGTAGTAGCTGCAATTCTCCATTTGGGCAATATTGAATTTGCAAAAGGAGAGGAAGTAGATTCTTCAGAACCCAAGGATGATATATCTCGGTTCCATCTCACTATGGCAGCTGAACTTTTCATGTGCGATGAAAAATCTCTTGAAGACTCCTTATGCAAACGAGTGATTGTTACTCGGGACGAGACTATTACAAAATGTCTTGATCCTGAATCTGCTACTGTTAGTCGGGATGCATTAGCCAAAATTGTTTATTCAAGGTTGTTTGATTGGATTGTGAACAAGATCAATAACTCAATTGGTCAAGATCCTGATTCAAAAAACTTAATCGGGGTTTTAGATATCTATGGATTTGAAAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACTAATGAGAAATTACAGCAACATTTCAACCAGCACGTTTTCAAGATGGAGCAGGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAGTTCATTGATAATCAAGATGTTCTTGATCTCCTTGAGAAGAAACCTGGCGGTGTCATCGCACTTTTGGATGAAGCATGTATGTTTCCAAGATCAACGTACGAGACATTTGCACAGAAGCTTTATCAAACTTTTAAAGACCATAAACGCTTTAGCAAGCCAAAGTTGTCATTGAGTGACTTCACAATATGTCACTATGCTGGCGATGTCACCTACCAGACTGAACACTTCCTTGATAAGAACAAAGATTATGTTGTTGCAGAGCATCAAGCACTTTTAAGTGCTTCTACTTGCTCGTTTGTTTCAAGCCTATTTCCTCCTTTACCTGAAGAATCTTCCAAATCATCTAAGTTTTCGTCAATAGGTTCTAGATTCAAGCAACAATTGCAAGCTCTACTTGAAACTTTGAGTGCCACTGAGCCACATTACATTCGCTGTGTAAAGCCAAACAACCTTCTGAAGCCATCCATGTTTGAGAATCATAATGTTTTACAGCAGCTTCGTTGTGGGGGAGTCATGGAAGCAATAAGGATCAGTTGTGCTGGATATCCTACTAGAAAGACTTTCGATGAATTTGTTGGTCGGTTTAGCATCTTGGCTCCTGATATTTTGATTGGGAGCTGCAACGAGGTCAGTGCTTGCAAGAGGCTCCTGGAGAAGGTGGACCTCAAAGGCTATCAGATTGGAAAATCGAAAGTGTTTCTTAGAGCTGGTCAGATGGCAGAATTGGATGCTTATCGAAGTGAGGTTTTAGGGAGGTCTGCTGCCATTATCCAAAGGAAAGTTCGCTCATATTTAGGTCGCAAAAATTTTATTTTGTTGCGATGGTCTGCCATACAAATCCAAACACTGTGTAGAGGACACGTTGCACGACGAATGTTTGACAGCATGAAAAGTAGATGGCGACAGTACTTGGCACATGTTCAGTATCTGAAGATCAGAAGAGCTGCAATTACCATGCAGTGTGCTTGGAGAGGGAGAGTTGCTCAGAAAGAGCTACGCAAACTTAAAATGGCTGCCAAGGAAACCGGTGCTCTCCAAGCTGCAAAAAATAAGCTGGAAAAGCAAGTGGAAGAACTAACATGGCGCTTGCAACTTGAGAAGCGAATGAGGGGTGACATTGAAGAAGCCAAAACGCAGGAAAATGCAAAATTACAGTGTGTTTTGCAAGAAATACAATCTCAATTTCAAGAAACCAAAGCTTTGCTTGACAAGGAACGGGAAATTGCTAAGGAAGCTGCTGAACAAGTCACAGTTGTGCAGGAGGTTCCAGTTATTGATCATGAACTGATCAGTAAACTTACTTCAGAAAATGAAAAACTTAAGATGGGTTTGTTCCACCATTTATACTTGATTAAAGTTACTGTATATGAACAATTGCAGGCTCTGGTAGATTCACTTGAAAAGAAAATCGATGAAACAGAGAAAAAATATGTGGAGTCAAACAAGCTTTGTGAGGAGCGCTTGAAGCTGGCTTTGGAGGCAGAGTCAAAGATAATTGAATTGAAGACAGCCATGCAAAGAATTTTACTGAATATCTTATTGATTGATTCAATAAAATATTATTGTAGGCTTGAAGAAAAACTTTTGGACTGGGAAAGCGAGGATCAAATTCGGCGGCAAGCATTGCTGAATTCTCCTGCAAAAACAATGCCAGAGCATTCATCAGAAACTGCTTCCTATAATGCAACACCAAGTAAAAAGTTTGGTACAGAGTCCGATGCAAAAATGAGGAGATCTCAAATTGAAAGACAACATGAGAATGTAGATGCTCTAATGAAATGCATAACCAAATATCTTGGATTCAGCGAGGGAAAACCTGTTGCAGCATTTACAATCTATAAATGTCTTCTCCAGTGGAGGTCATTGGAAGCAGAAAAAACAAGTGTATTTGATCGTCTCATTCAAATTATTGGTTCTGCGATTGAGAATCAGGATAATAATGATCATATGGGATATTGGCTATCCAATACTTCTACACTGCTGTTTTTGCTTCAGAAGAGTTTGAAAGCCACTGGTACGACTGCATCAAGGAAGCCTCCCCCGCCAACATCATTGTTTGGGAGGATGACGCAGGGTTTTCGTTCATCCTCTGCCAACCTTTCAGTTGGTGCCCTTGATGTAGTCCGGTCAGTGGAGGCCAAATATCCAGCATTGCTATTTAAGCAGCAACTCACAGCCTATGTGGAAAAGATGTATGGAATAATCCGAGATAATGTAAAGAAGGAATTGTCTCCGATTCTTTCATCTTGTATCCAGGCACCCAAAGTTTCAAGAGGAAGTGTTATGAAATCATCTGGGCAATCAAATAGCAATAGTCTTCCATCTGGTCCTTGGCAATGTATTATTGAGAATCTAGATGGACTTCTTTGTACATTAAAAGATAATTGTGTGCCTACTGTTCTTGTTCAGAAGATATTTACTCAAATCTTCTCATATATAAATGTTCAACTATTTAACGGTCTTCTGCTTCGCCGAGAGAGCTGTACTTTCAGTAGTGGGGAATATGTAAAGTCTGGTTTAGATGAGCTAGAGCTTTGGTGTTCCCAAGCCAAACATGAGCTTGCTGGCTTGACCTGGGATGAACTCAAACACGTGAGGCAAGCTGTTGGATTCTTGGTTATACACCAGAAGTCTAGAATATCATATGATGATATTACCAATGATCTCTGCCCTATCCTGAGTGTTCAACAACTTTATAGAATATGCACAGTTTATCGGGATGACAATTATAATACTCGAAGTGTATCGCCTGATGTCATTTCGAGCATGAAGATTCTTATGACTGAGGATTCTACTGAAGACAGCGACTCCTTTCTTTTGGACGACAATTCCAGCATTCCATTTTCAGTTGATGACATTTCTAGTTCTCTGCAAGAGAAGAGTTTTTCAGATGTCAAACCTCCCGTAGAATTGCTCGAAAATCCCGGCTTCCAATTTTTACAGGACTAA 4743 41.13 MDSPPCSSQLTLLFGLNLTDPAAAAAFICDNFSDTRYAVDTTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGIFYYLFGYAFAFGSPSNGFIGRHFFALKSFPSPSSDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYIEAKASNIYPKDPEFPSCGVDDMTKLAYLHEPGLLQNLKSRYDINEIYTYTGNILIAVNPFRRLPHLYNNHMMEQYKGAALGELSPHPFAIADSAYRLMINEGTSQSILVSGESGAGKTESTKMLMHYLAFMGGRAGGKSATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDIERYRLGNPKTFHYLNQSNCYNLDGVDDSKEYLVTRNAMDVVGINSDEQDAIFRVVAAILHLGNIEFAKGEEVDSSEPKDDISRFHLTMAAELFMCDEKSLEDSLCKRVIVTRDETITKCLDPESATVSRDALAKIVYSRLFDWIVNKINNSIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLLEKKPGGVIALLDEACMFPRSTYETFAQKLYQTFKDHKRFSKPKLSLSDFTICHYAGDVTYQTEHFLDKNKDYVVAEHQALLSASTCSFVSSLFPPLPEESSKSSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPSMFENHNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVGRFSILAPDILIGSCNEVSACKRLLEKVDLKGYQIGKSKVFLRAGQMAELDAYRSEVLGRSAAIIQRKVRSYLGRKNFILLRWSAIQIQTLCRGHVARRMFDSMKSRWRQYLAHVQYLKIRRAAITMQCAWRGRVAQKELRKLKMAAKETGALQAAKNKLEKQVEELTWRLQLEKRMRGDIEEAKTQENAKLQCVLQEIQSQFQETKALLDKEREIAKEAAEQVTVVQEVPVIDHELISKLTSENEKLKMGLFHHLYLIKVTVYEQLQALVDSLEKKIDETEKKYVESNKLCEERLKLALEAESKIIELKTAMQRILLNILLIDSIKYYCRLEEKLLDWESEDQIRRQALLNSPAKTMPEHSSETASYNATPSKKFGTESDAKMRRSQIERQHENVDALMKCITKYLGFSEGKPVAAFTIYKCLLQWRSLEAEKTSVFDRLIQIIGSAIENQDNNDHMGYWLSNTSTLLFLLQKSLKATGTTASRKPPPPTSLFGRMTQGFRSSSANLSVGALDVVRSVEAKYPALLFKQQLTAYVEKMYGIIRDNVKKELSPILSSCIQAPKVSRGSVMKSSGQSNSNSLPSGPWQCIIENLDGLLCTLKDNCVPTVLVQKIFTQIFSYINVQLFNGLLLRRESCTFSSGEYVKSGLDELELWCSQAKHELAGLTWDELKHVRQAVGFLVIHQKSRISYDDITNDLCPILSVQQLYRICTVYRDDNYNTRSVSPDVISSMKILMTEDSTEDSDSFLLDDNSSIPFSVDDISSSLQEKSFSDVKPPVELLENPGFQFLQD 1580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 504384 520743 - Bda000873.2 Bda13g00031 18162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00031 1580 Gene3D Myosin VI head, motor domain, U50 subdomain 425 714 - -
Bda13g00031 1580 PANTHER MYOSIN-6-LIKE ISOFORM X1 895 1578 - -
Bda13g00031 1580 Pfam Myosin head (motor domain) 173 833 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g00031 1580 MobiDBLite consensus disorder prediction 1141 1166 - -
Bda13g00031 1580 Gene3D Ammonium transporter AmtB like domains 17 156 IPR029020 -
Bda13g00031 1580 CDD MYSc_Myo11 185 833 IPR036018 -
Bda13g00031 1580 Gene3D - 780 843 - -
Bda13g00031 1580 ProSiteProfiles Dilute domain profile. 1229 1527 IPR002710 -
Bda13g00031 1580 Gene3D Kinesin motor domain 174 775 IPR036961 -
Bda13g00031 1580 PANTHER MYOSIN 149 896 - -
Bda13g00031 1580 MobiDBLite consensus disorder prediction 1141 1178 - -
Bda13g00031 1580 Coils Coil 986 1006 - -
Bda13g00031 1580 Coils Coil 1054 1081 - -
Bda13g00031 1580 SUPERFAMILY Ammonium transporter 37 154 - -
Bda13g00031 1580 SMART DIL_2 1402 1509 IPR002710 -
Bda13g00031 1580 Gene3D - 365 423 - -
Bda13g00031 1580 ProSiteProfiles IQ motif profile. 910 939 IPR000048 GO:0005515
Bda13g00031 1580 PANTHER MYOSIN-6-LIKE ISOFORM X1 149 896 - -
Bda13g00031 1580 Coils Coil 933 967 - -
Bda13g00031 1580 CDD MyosinXI_CBD 1180 1549 IPR037975 GO:0007015
Bda13g00031 1580 ProSiteProfiles Myosin motor domain profile. 171 845 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g00031 1580 Gene3D - 552 736 - -
Bda13g00031 1580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 939 IPR027417 -
Bda13g00031 1580 ProSiteProfiles IQ motif profile. 871 900 IPR000048 GO:0005515
Bda13g00031 1580 Pfam IQ calmodulin-binding motif 911 931 IPR000048 GO:0005515
Bda13g00031 1580 Pfam IQ calmodulin-binding motif 872 889 IPR000048 GO:0005515
Bda13g00031 1580 Pfam IQ calmodulin-binding motif 850 868 IPR000048 GO:0005515
Bda13g00031 1580 Gene3D - 848 895 - -
Bda13g00031 1580 Gene3D - 896 938 - -
Bda13g00031 1580 PANTHER MYOSIN 895 1578 - -
Bda13g00031 1580 SMART MYSc_2a 165 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g00031 1580 PRINTS Myosin heavy chain signature 258 283 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g00031 1580 PRINTS Myosin heavy chain signature 542 570 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g00031 1580 PRINTS Myosin heavy chain signature 309 336 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g00031 1580 PRINTS Myosin heavy chain signature 201 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g00031 1580 PRINTS Myosin heavy chain signature 595 623 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bda13g00031 1580 SMART iq_5 870 892 IPR000048 GO:0005515
Bda13g00031 1580 SMART iq_5 847 869 IPR000048 GO:0005515
Bda13g00031 1580 SMART iq_5 909 931 IPR000048 GO:0005515
Bda13g00031 1580 Pfam Ammonium Transporter Family 43 154 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bda13g00031 1580 Pfam DIL domain 1403 1506 IPR002710 -
Bda13g00031 1580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 895 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00456 Bda-Chr4:52807187 Bda13g00031 Bda-Chr13:504384 0 dispersed
Bda07g01187 Bda-Chr7:14290412 Bda13g00031 Bda-Chr13:504384 0 dispersed
Bda09g01076 Bda-Chr9:41176535 Bda13g00031 Bda-Chr13:504384 0 dispersed
Bda10g00533 Bda-Chr10:39070163 Bda13g00031 Bda-Chr13:504384 1.76E-36 dispersed
Bda12g00355 Bda-Chr12:4099685 Bda13g00031 Bda-Chr13:504384 0 dispersed
Bda12g00685 Bda-Chr12:33348517 Bda13g00031 Bda-Chr13:504384 1.55E-63 dispersed
Bda13g00031 Bda-Chr13:504384 Bda13g01585 Bda-Chr13:39355497 2.72E-58 dispersed
Bda13g00031 Bda-Chr13:504384 Bda05g00875 Bda-Chr5:57197472 2.14E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00031 K10357 - jre:108980231 2183.68