Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00078 ATGGTAGCAGAGCCTTGGATTGTGAAAATGGGCAACCACGTGAGTTCCAACTTCAGGAGCGCGATGCTTCTTGAACCTGCGAAAAAGAAAAAAGGTCCCAAAAGTTCAGAAACCACCAAAGACAAGCAGACTATAGGTATTCTCTCTTTCGAGGTTGCTAATGTAGTGTCCAAAATCGTTCACCTACACCACTCGCTCACAGATTTTGAGATCTCGAAGCTCAAGAAGGAGATCTTGAGCACCGATGGCGTTCGGAATCTTGTCTCCTCCGACGAGGTTTATCTTCTCGAGCTCGCTCTGACCGAGAAGCTTGGGGAACTGAATCACGTGGCTAGTGTGGTCTCGAGACTAGGGAAAAGGTGCATTGAACCGGCCTTGCAGGGGTTTGAGCATGTGTACTCGGACATTGTTAGCGGCGCCATCGAAGTAAAAGAATTGGGTTTTTTGGTGAAGGATATGGATGGAATGGTGAGGAAGATGGAGCGATACGTGACTTCTACCGCCAATTTGTACAGCGAAATGGAAGTTTTGAATGAACTGGAGCAGGCAACTAAAAAGTTTCAGAATAATCAGCACGAGGAGAGTCGAAGAGCGTTTGAGCAAAAAGTATCATGGCAGAAGGAAGACATCAGGCATCTTCAGGACGTTTCTCTTTGGAACCAAACCTACGATAAGGTTGTAGAGCTATTGGCGAGGACTGTATGTACAGTTTATGCAAGAATTTTTCATAGTATTCCTAATCGCAGACATTCAGGGGAGATGGGGAGGGTCCCAATGGAGAAAAGATGGTCAAGTTTCAAGCCTCAACACGAATCACGGAAAAATGAAGCAGCTCCCTTTCGAACTGAAGATTTCAATTTCCCTTGTGGCACAAGCCCAGGGCGGCTTTTCATGGAATGCCTTAGCCTAAGCAGCTCAATTTCAATTCTGGGCGAAGAGGATGATTATATAGATCACGATGACCGAAGTAGTCGAATTTCGAGTCGATGCAGTTTGACAAATAGTGGGTATAGAAGGGAGCATTTGATTCGATCCGGTACGTTCAGCCGAACTCACATTAGTGCTAATTTAAATAGAGAACCAAAACAATCAAAAATTTGGATGAGCAATGGTGCAGGGTTTGGCCCCAGGAGCAGATTATCCGTTTATGCTCCTCCTTCCACCGTCGGAGGCTCTAGTTTAGGCTTGCATTATGCCAATGTGATCATCGTCATCGAGAAGCTGCTCCGATATCCTCATCTCGTCGGAGAAGAGGCTAGAGATGATTTATATCAGATGTTACCAACAAGCTTAAGAACATCTCTGAAGACCCATTTAAAGGCTTACTTAAAAAATCTAGCCATATACGATGCTCCTCTCGCCCATGATTGGAAAGAGACTCTAAATGGGATCTTAAGATGGCTGGCCCCCCTTGCACATAACATGATCCGATGGCAAAGCGAACGGAATTTCGAGCAGCATCAAATAGGCACACGAACTAATGTCTTACTGCTCCAAACGCTGTACTTTTGTGAGAGAGAGAAGACAGAAGCTGCTATTTGTCAACTTCTGGTTGGGTTGAATTACATATGTCGTTACGAGCAGCAACAGAACGCGTTATTGGACTGCGCTAGCAGTTTTGATTTTGAAGATTGCATGGAATGGCAAATGCAGTGCAAAGCTTCTTATCTCATTTCGATTAACAGCGCCGGGCGAAGAAATAGTCGTAGCAGAGAACAAGAAGAAGAAGAAAGAGAAAATGGAGAAGCTGCTGTTGAAGTCGGAACTAAGAGGCCCAGAGGTCGACCTCCTGGCTCTAAAAACAAACCGAAACCACCGGTTATTATCGATCGGGATACCCCCAACTCTCTTCGAAGTATAGTAATGGAGGTTGCTACGGGCGCCGATATTGCAGAGAGCATCGCGGAGTACGCTCGACGGCGCCGGCGAGGCATTTGCGTTCTAAGCGCAAACGGTTCGGTAGCAAACGTCACTCTAACTCAGCCCGCCGCACCGGGCACGTCATTGGCTCTTTACGGGAGGTTCGAGATTCTTTCATTGTCAGGGACTTTCTTACCTGATCCAGCCCCTCAGGGGTCCAGTGGGTTGACGGTCTACTTAGCCGGAGCTCAGGGGCGGGTGGTCGGAGGAACTGTTGTTGGGTCGCTAGTTGCCGCCGGGACAGTAATAATCATTGCTGCAATTTTCTCTAATGCAATTTACCAGAGATTGCCTATGGAAGAAGATGATCCAGAAAGAGAAAGCAGCGGATATGATGTCGGAATAGATCAGCCCAGGCTGATTGATCCGTCGACGATGGCACACTACACCTCTAATTTACCATCAAATCTAGTTTCTAATGAGCAGTCTGATGTATATAACTGA 2364 46.57 MVAEPWIVKMGNHVSSNFRSAMLLEPAKKKKGPKSSETTKDKQTIGILSFEVANVVSKIVHLHHSLTDFEISKLKKEILSTDGVRNLVSSDEVYLLELALTEKLGELNHVASVVSRLGKRCIEPALQGFEHVYSDIVSGAIEVKELGFLVKDMDGMVRKMERYVTSTANLYSEMEVLNELEQATKKFQNNQHEESRRAFEQKVSWQKEDIRHLQDVSLWNQTYDKVVELLARTVCTVYARIFHSIPNRRHSGEMGRVPMEKRWSSFKPQHESRKNEAAPFRTEDFNFPCGTSPGRLFMECLSLSSSISILGEEDDYIDHDDRSSRISSRCSLTNSGYRREHLIRSGTFSRTHISANLNREPKQSKIWMSNGAGFGPRSRLSVYAPPSTVGGSSLGLHYANVIIVIEKLLRYPHLVGEEARDDLYQMLPTSLRTSLKTHLKAYLKNLAIYDAPLAHDWKETLNGILRWLAPLAHNMIRWQSERNFEQHQIGTRTNVLLLQTLYFCEREKTEAAICQLLVGLNYICRYEQQQNALLDCASSFDFEDCMEWQMQCKASYLISINSAGRRNSRSREQEEEERENGEAAVEVGTKRPRGRPPGSKNKPKPPVIIDRDTPNSLRSIVMEVATGADIAESIAEYARRRRRGICVLSANGSVANVTLTQPAAPGTSLALYGRFEILSLSGTFLPDPAPQGSSGLTVYLAGAQGRVVGGTVVGSLVAAGTVIIIAAIFSNAIYQRLPMEEDDPERESSGYDVGIDQPRLIDPSTMAHYTSNLPSNLVSNEQSDVYN 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 999355 1005413 + Bda000924.2 Bda13g00078 18209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00078 787 MobiDBLite consensus disorder prediction 565 612 - -
Bda13g00078 787 CDD DUF296 618 704 IPR005175 -
Bda13g00078 787 PANTHER PLANT/PROTEIN (DUF668) 1 552 - -
Bda13g00078 787 Gene3D - 617 746 - -
Bda13g00078 787 PANTHER BNAC09G50660D PROTEIN 1 552 - -
Bda13g00078 787 MobiDBLite consensus disorder prediction 567 589 - -
Bda13g00078 787 ProSiteProfiles PPC domain profile profile. 614 754 IPR005175 -
Bda13g00078 787 Pfam Plants and Prokaryotes Conserved (PCC) domain 618 730 IPR005175 -
Bda13g00078 787 Coils Coil 177 197 - -
Bda13g00078 787 Pfam Protein of unknown function (DUF668) 388 477 IPR007700 GO:0045927
Bda13g00078 787 SUPERFAMILY AF0104/ALDC/Ptd012-like 615 742 - -
Bda13g00078 787 Pfam Domain of unknown function (DUF3475) 47 103 IPR021864 GO:0045927
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00620 Bda13g00078 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01096 Bda-Chr7:12835289 Bda13g00078 Bda-Chr13:999355 2.99E-12 dispersed
Bda12g00282 Bda-Chr12:3056856 Bda13g00078 Bda-Chr13:999355 1.24E-10 dispersed
Bda13g00078 Bda-Chr13:999355 Bda15g00342 Bda-Chr15:6271137 2.00E-64 dispersed
Bda03g00792 Bda-Chr3:6617600 Bda13g00078 Bda-Chr13:999355 2.86E-34 transposed
Bda11g00620 Bda-Chr11:6256678 Bda13g00078 Bda-Chr13:999355 0 transposed
Bda14g00044 Bda-Chr14:410534 Bda13g00078 Bda-Chr13:999355 1.23E-43 transposed
Bda11g00619 Bda-Chr11:6253207 Bda13g00078 Bda-Chr13:999355 5.19E-16 wgd
Bda13g00078 Bda-Chr13:999355 Bda03g00846 Bda-Chr3:7311081 1.43E-70 wgd
Bda13g00078 Bda-Chr13:999355 Bda08g00269 Bda-Chr8:2778593 2.28E-74 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00078 - - zju:107408657 783.097