Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00144 ATGAAGGGCGGCTGTAATGATCCATTTGAGGTAGATGGTCCAAGTTTCTTCTCTGGGGCCAGTCATCCCCGAGAACCTGTTGATACAGATCCAATGAGAACTGTTTATGAACCACTAGGCCAAACTCAATCTGAGGCTGGTTGCCTTATAAAGAGCTTGTCTACAAAGGGTCCTTTTCTGGACGATCTTTCAGTCAGGATTCCTGCTAAGAAACCAGTCACCGTTCTTTCACCTGTGGAGAGTTCAGTAGAAGAATTTAATGATCCGGGTGCACTGTCTCCATCGTTTTCAGTTCAATGCGTGTCACAAAATACAGAGAATGCTCGCCTTCCTCCTGTTTCTGATCAAAAGGAACGTGTTTGGGATGCTTCTTTGCCTCCAAGCGGTAATGTCAGTCCGCTAAGTAGCATTGATAGTTTGGGTGTTGTAACAGCTATGAGCATTGGTAATAGCTGCGCTAGTACATATAGAAGTGATGCAATAACAAATGATGTCATGTTTAGTGTGGAGAGAAACTGTGAGAGTACTAAAGAAAGTGTCATAGGGGATTCACTTGAGAGTGCCAAAACAAGTATTAGTCGAGCAAGTGAAAGCAGTGGTCTTAGTGATGATAGTAGCTGGAGCAAAACTACTGGAAGTGCAAATAAGCCTCACAAAGGAAATGAACCTAGGCTGAAGGCTATTCTTGCTATTCAAGCACGTGATGGGATTTTGGGCATGAGTCACTTTAGATTGCTTAAAAGACTTGGATGCGGCGACATTGGCAGTGTATATCTTTCAGAATTGTGTGCAACTCGCTGCTACTTTGCAATGAAAGTAATGGACAAGGCATCTCTTGCTAGTAGGAAGAAGTTGACTAGAGCTCAAACAGAAAGGGAAATTTTACAGTTACTGGATCATCCATTTCTCCCTAATTTGTACACTCATTTTGAAACCGACAGATTCTCATGTTTAGTGATGGAGTGTTGTCCAGGGGGAGATCTGCACACTTTAAGGCAACGGCAACCAGGGAAACATTTCTCTGAATATGCTGCGAGATTTTATGCAGCTGAGGTTCTTTTGGCACTTGAGTATCTTCACATGCTTGGAGTCGTCTATCGGGACTTGAAACCTGAAAATGTACTCGTCCGTGATGATGGCCACATCATGCTCTCTGATTTTGACCTATCATTAAGATGTGCTGTTTCCCCAACTCTCATAAAATCCTCATTCGATTCCGGCCCTTCAAAACGAGGTGCTGATGGAGCATTCTGTGTCCAACCTGCCTGTATTGAACCCTCTACCATGTGCATCCAACCCGCATGTTTTCTTCCCCGAATCTTCCCTCCGAAGAGCAATAAAAAACGCCAAAACCCTCGAAGTGATCATGGGCTACCACCCAATGCACTTCCCGAGCTCGTTGCCGAGCCCACCACAGCCCGTTCAATGTCATTCGTCGGAACACATGAATATCTAGCCCCAGAAATTATCAAAGGAGAGGGTCATGGGAGTGCTGTTGATTGGTGGACATTTGGCATTTTCTTGCACGAACTACTCTGCGGGAGAACTCCATTCAAAGGCTCGGGAAATCGAGCAACGCTTTTCAATGTGGTCGGCCAGCAACTCAGATTTTCTGACTCTCCAGCAACTAGCTATGCAAGCCGAGATCTAATACGAGGTCTGCTAGTGAAAGAGCCACGTGATCGTTTAGGAGTTAAAAAGGGCGCAACAGAAATAAAGCAGCACCCCTTCTTTGAAGGTGTTAATTGGGCTTTAATTAGATGCAGTACGCCACCAGAGGTGCCTCGACCAGTGGATATGGAACCTTCCAGAAAATGCAGTGCAGCCAACACAATTGGTGTCGGAAGCAGCAGCAAGAGGATGGCCCGGACCGACGTGAAACCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTGA 1917 45.44 MKGGCNDPFEVDGPSFFSGASHPREPVDTDPMRTVYEPLGQTQSEAGCLIKSLSTKGPFLDDLSVRIPAKKPVTVLSPVESSVEEFNDPGALSPSFSVQCVSQNTENARLPPVSDQKERVWDASLPPSGNVSPLSSIDSLGVVTAMSIGNSCASTYRSDAITNDVMFSVERNCESTKESVIGDSLESAKTSISRASESSGLSDDSSWSKTTGSANKPHKGNEPRLKAILAIQARDGILGMSHFRLLKRLGCGDIGSVYLSELCATRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPNLYTHFETDRFSCLVMECCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKSSFDSGPSKRGADGAFCVQPACIEPSTMCIQPACFLPRIFPPKSNKKRQNPRSDHGLPPNALPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLCGRTPFKGSGNRATLFNVVGQQLRFSDSPATSYASRDLIRGLLVKEPRDRLGVKKGATEIKQHPFFEGVNWALIRCSTPPEVPRPVDMEPSRKCSAANTIGVGSSSKRMARTDVKPGGKYLDFEFF 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1914433 1917130 - Bda001004.1 Bda13g00144 18275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00144 638 Pfam Protein kinase domain 475 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00144 638 Pfam Protein kinase domain 244 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00144 638 MobiDBLite consensus disorder prediction 445 464 - -
Bda13g00144 638 MobiDBLite consensus disorder prediction 191 221 - -
Bda13g00144 638 SMART serkin_6 243 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00144 638 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 6 638 - -
Bda13g00144 638 SUPERFAMILY Protein kinase-like (PK-like) 228 602 IPR011009 -
Bda13g00144 638 MobiDBLite consensus disorder prediction 191 217 - -
Bda13g00144 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Bda13g00144 638 CDD STKc_phototropin_like 241 599 - -
Bda13g00144 638 Gene3D Transferase(Phosphotransferase) domain 1 327 394 - -
Bda13g00144 638 Gene3D Phosphorylase Kinase; domain 1 241 326 - -
Bda13g00144 638 ProSiteProfiles Protein kinase domain profile. 243 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00144 638 PANTHER FLIPPASE KINASE 1-RELATED 6 638 - -
Bda13g00144 638 MobiDBLite consensus disorder prediction 1 29 - -
Bda13g00144 638 Gene3D Transferase(Phosphotransferase) domain 1 473 596 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00409 Bda13g00144 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00539 Bda-Chr12:8548503 Bda13g00144 Bda-Chr13:1914433 0 dispersed
Bda13g00144 Bda-Chr13:1914433 Bda13g01631 Bda-Chr13:39798999 0 dispersed
Bda11g00409 Bda-Chr11:4409250 Bda13g00144 Bda-Chr13:1914433 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69988 PF00069 Pkinase 1.00E-35 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00144 - - vvi:100244501 1037.71