Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00147 ATGGGTTGTGTACATGGGAAATGTTGTAGTCGGTACCCTCGCTCGTCGGACGGGGACTCGCCGGAATTGCACGAAACCGGTCCTGTCAGTGTGCAAGGGAAATACATTTTAACAGAGAGATCATTGGAGGTTGTATCTGTTCCCTCCCACGATTACCGTTTGGAATACTCTGTTCTTTCCCAGCCAGGTTATTACCCCGATACTCCCGACAAGGAAAACCAAGATAGTTTCTGTATCAGAACTCAAATCCAAGGCGACCCAAGTATTCATTTCTTTGGAGTTTTCGATGGGCATGGTCAATTTGGCCCTGAGTGTTCTAACTTTGTCAAGGAAAGGCTAGTAGAAACCCTGTCAAACGACTCCACTTTGTTGGATGATCCATTAAAAGCCTTCAGTTTGGCATTTTCGACCACAAATCGTGAACTACATGAAAGCAAAATTGATGATTCATTAAGTGGCACTACAGCAATCACTGTGCTTCTGATTGGGGAAACCCTTTTGGTTGCAAATGTGGGCGATTCTAGGGCGGTGATTGCTGTTAAAGAAGGGAATCAAATTGTGGCCGAGGATCTATCACACGATCAAACACCCTTTAGAAAGGATGAGTACAAGAGGGTGAAGTTCTGTGGAGCTAGGGTCTTGAGTGTTGATCAAGTGGAAGGATTGAAGGATCCCGATGTTCAAAGCTGGGGCGATGAGGAAAGTCAAGGGAGCGATCCTCCGCGTTTGTGGGTTCAAGGAGGGATGTATCCCGGCACTGCATTTACGAGGAGTGTTGGAGATAGTATAGCTGAGGGTATTGGTGTTATTGCAGAGCCTGAAGTGTCGATGATTCAGCTAACACCTAATCATCTTTTCTTCGTCGTTGCAAGCGATGGAGTTTTCGAGTTCCTTTCCAGCCAAACTGTTGTCGATATGGTATCGAGATATACAGATCCTCGTGATGCTTGCTCTGCAATTGCTGGAGAATCTTACAAACTATGGCTGGAAAATGAAAACCGGACTGATGATATAACAATTATGATCGTTCATATCAAAGGCTTGTCTAATTCAGGTGCAGCTACTAGTGCTGGATCTAGCATGATGAGAATTAGGCCGGCATGGCCCGGTGCCGGTAAAGTATCGTCTGAGCTATCTTCTACCATCGGTGGGTCCGACATCTATCGTTCAGCGAGAAGTGAGTTTTCCGATCTACCAACGTCACATCGTGTGGCCTTAATGAATTGGAGCCCGGCCATTGTTGTACCATCTCCAACACATCACAGACCTTTGGAAGTGGATGTAGGGTAG 1290 46.12 MGCVHGKCCSRYPRSSDGDSPELHETGPVSVQGKYILTERSLEVVSVPSHDYRLEYSVLSQPGYYPDTPDKENQDSFCIRTQIQGDPSIHFFGVFDGHGQFGPECSNFVKERLVETLSNDSTLLDDPLKAFSLAFSTTNRELHESKIDDSLSGTTAITVLLIGETLLVANVGDSRAVIAVKEGNQIVAEDLSHDQTPFRKDEYKRVKFCGARVLSVDQVEGLKDPDVQSWGDEESQGSDPPRLWVQGGMYPGTAFTRSVGDSIAEGIGVIAEPEVSMIQLTPNHLFFVVASDGVFEFLSSQTVVDMVSRYTDPRDACSAIAGESYKLWLENENRTDDITIMIVHIKGLSNSGAATSAGSSMMRIRPAWPGAGKVSSELSSTIGGSDIYRSARSEFSDLPTSHRVALMNWSPAIVVPSPTHHRPLEVDVG 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1964013 1966281 - Bda001007.1 Bda13g00147 18278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00147 429 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 35 426 - -
Bda13g00147 429 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Bda13g00147 429 SMART PP2C_4 55 343 IPR001932 -
Bda13g00147 429 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Bda13g00147 429 SUPERFAMILY PP2C-like 41 347 IPR036457 -
Bda13g00147 429 CDD PP2Cc 71 345 IPR001932 -
Bda13g00147 429 Pfam Protein phosphatase 2C 80 321 IPR001932 -
Bda13g00147 429 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 35 426 - -
Bda13g00147 429 Gene3D - 46 347 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00147 Bda-Chr13:1964013 Bda01g01090 Bda-Chr1:45656495 2.37E-28 dispersed
Bda11g00553 Bda-Chr11:5765106 Bda13g00147 Bda-Chr13:1964013 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00147 - - zju:107423247 629.402