Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00161 ATGGGGTGTGTGTTTGGGAGAGAAGTATCGGCCAAGGCCGAGGAGAAGGATGAGAGTGAGGAGAGGAATAAGGATGAGGTTAGGGCTTCTGAGAAAGCCGAGGTTAGCGAAGTACATAATGGGGGGAATCTGAAGGCGGTGGAAGAGGAAAAGAGCAGAAGGCCGAAAGGCGAGCGGAGACGATCAAGGCCAAATCCAAGGCTGAGCAACCCACCGAAGAATGTGCATGGCGAGCAAGTCGCTGCTGGCTGGCCATCTTGGCTCTCCGCTGTCGCCGGGGAAGCCATCAACGGCTGGACTCCTCGTCGTGCTGACACTTTCGAGAAGCTTGATAAGATCGGGCAAGGTACATACAGCAATGTGTACAAAGCTAGGGATACATTGACGGGAAAAATTGTTGCATTGAAGAAGGTTCGCTTCGACAATTTGGAGCCGGAGAGTGTGAAGTTTATGGCTAGAGAGATTCTCATTCTGCGTCGTTTAGATCATCCTAATGTCGTAAAATTGGAAGGTTTAGTCACTTCGCGTATGTTCTGCAGTTTGTATCTTGTATTTGAATATATGGAGCATGATTTGGCTGGACTTGCAGCCAGCCCAGACATCAAGTTTACGGAACCCCAGGTTAAATGTTACATGAATCAACTATTATCTGGGCTTGAACATTGTCATAATTGCCACGTGCTTCATCGTGATATAAAGGGTTCAAATCTTCTTATTGACAATGATGGAATTCTAAAGATTGCGGATTTTGGATTGGCTTCTTTCTTTGATCCTAATCATAAGCACCCCATGACAAGTAGGGTGGTTACTCTATGGTATCGCCCTCCAGAACTACTTCTCGGCGCTACTGATTATGGTGTTGGTGTCGATCTTTGGAGTGCTGGATGTATATTAGCCGAGTTGTTGGCCAGGAAGCCTATCATGCCTGGACGCACAGAGGTAGAGCAGCTGCATAAGATATTCAAGCTTTGTGGATCGCCTTCTGAAGAATACTGGAGAAAGTCAAAGTTGCCTCATGCTACTATTTTCAAGCCTCAACAATCTTACAAGCGATGCATATCTGAGACATTTCATGATTTTCCGCCATCTTCGTTGCCATTAATTGAGAGCCTTCTTTCAATCGACCCAGCTGAACGCCAGACTGCAACCGCTGCATTGAGGAGTGAATTCTTCAGCACTAAACCTCAAGCTTGCGACCCTTCCGACCTGCCAAAGTATCCTCCCAGCAAGGAGATGGATGCTAAGCTGCGTGACGAAGAAAGTAGAAGGCTTAGAGCTGCTGGCCGATCCAATGCAGACGGTAGTAAGAAAATCCGTCACCGAGACAGAACCAGTAGGGCGATTCCTGCTCCAGAAGCCAATGCCGAGCTGCCGGCTAATCTCGACAGGCGGAGGCTAATATCCCACGCAAATGCGAAGAGCAAGAGCGAGAAGTTTCCTCCTCCTCACCAGGACGGAGCCCTCGGCTATCCTCTGGGCTCATCCCATCACATGGACCCGATATACGATCCTCCAGACGTTCCATTCAGTTCTTCAAATTTCTCATATGCAAAAGCACCCATCCAGACTTGGTCAGGGCCGTTGCTCGAGCCAGCGGCTGTTCCTTCCAAAAGAAAAAAACGCATGAAAGGCGACGGTCACGCGCACTGA 1650 48.67 MGCVFGREVSAKAEEKDESEERNKDEVRASEKAEVSEVHNGGNLKAVEEEKSRRPKGERRRSRPNPRLSNPPKNVHGEQVAAGWPSWLSAVAGEAINGWTPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMFCSLYLVFEYMEHDLAGLAASPDIKFTEPQVKCYMNQLLSGLEHCHNCHVLHRDIKGSNLLIDNDGILKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLARKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSKLPHATIFKPQQSYKRCISETFHDFPPSSLPLIESLLSIDPAERQTATAALRSEFFSTKPQACDPSDLPKYPPSKEMDAKLRDEESRRLRAAGRSNADGSKKIRHRDRTSRAIPAPEANAELPANLDRRRLISHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPIYDPPDVPFSSSNFSYAKAPIQTWSGPLLEPAAVPSKRKKRMKGDGHAH 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2092316 2096016 - Bda001022.1 Bda13g00161 18292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00161 549 SMART serkin_6 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00161 549 Gene3D Transferase(Phosphotransferase) domain 1 190 430 - -
Bda13g00161 549 CDD STKc_CDK9_like 107 391 - -
Bda13g00161 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Bda13g00161 549 PANTHER CELL DIVISION PROTEIN KINASE 55 540 - -
Bda13g00161 549 MobiDBLite consensus disorder prediction 525 549 - -
Bda13g00161 549 ProSiteProfiles Protein kinase domain profile. 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00161 549 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Bda13g00161 549 MobiDBLite consensus disorder prediction 458 480 - -
Bda13g00161 549 MobiDBLite consensus disorder prediction 406 447 - -
Bda13g00161 549 Pfam Protein kinase domain 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00161 549 MobiDBLite consensus disorder prediction 9 35 - -
Bda13g00161 549 MobiDBLite consensus disorder prediction 1 79 - -
Bda13g00161 549 MobiDBLite consensus disorder prediction 395 513 - -
Bda13g00161 549 PANTHER OS01G0367700 PROTEIN 55 540 - -
Bda13g00161 549 SUPERFAMILY Protein kinase-like (PK-like) 100 396 IPR011009 -
Bda13g00161 549 Gene3D Phosphorylase Kinase; domain 1 94 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00506 Bda-Chr9:6707338 Bda13g00161 Bda-Chr13:2092316 0 dispersed
Bda11g00934 Bda-Chr11:9121454 Bda13g00161 Bda-Chr13:2092316 0 dispersed
Bda13g00161 Bda-Chr13:2092316 Bda14g00861 Bda-Chr14:6618208 0 dispersed
Bda08g01030 Bda-Chr8:21356620 Bda13g00161 Bda-Chr13:2092316 0 transposed
Bda11g00865 Bda-Chr11:8516932 Bda13g00161 Bda-Chr13:2092316 1.19E-112 transposed
Bda11g01584 Bda-Chr11:49137799 Bda13g00161 Bda-Chr13:2092316 0 transposed
Bda11g00541 Bda-Chr11:5657311 Bda13g00161 Bda-Chr13:2092316 2.02E-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69990 PF00069 Pkinase 4.60E-68 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00161 K08819 - vvi:100240938 909.827