Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g00167 | ATGGGTGGGTGCCTTCCTTGTTTGAGATCATCCGTGGAAGAGGGTAGTGGGGATAAGGAAGCAACTAAGAAGGAATCGTTCAAGGATGGCTCTGCTGCTCAGATTCACCACATCACCAGGGTTGGCTCAGAAAAATCTAAATCACGAAGCAGTAATGACGCCAAGAAGGAATCAACTGTTCCAAAAGACGGGCCGACGGCTCATATTGCAGCTCAAACCTTCACATTTCGAGAACTTGCAGCTGCAACAAAGAATTTTAAGCCCGAATGCTTACTAGGCGAAGGAGGATTTGGCCGAGTTTACAAAGGTCGTTTAGAGAGCACAGGACAGGCAATTGCTGTAAAACAGCTTGATCGAAATGGCCTCCAAGGAAATCGGGAATTTCTAGTGGAGGTTCTAATGCTGAGTCTTCTACACCATCCAAATCTCGTGAACTTGATTGGCTATTGCGCCGATGGGGATCAACGGCTTCTTGTTTACGAGTTCATGCCATTAGGATCTTTGGAGGATCATTTACATGATCTTCCGCAGGATAGGGAGCCCCTGGATTGGAGCACGAGAATGAAGATTGCAGCCGGTGCAGCAAAGGGATTGGAGTATTTACACGATCAAGCAAACCCTCCAGTTATATACCGAGACTTGAAGTCATCGAACATCCTTCTAGAAGAAGGTTATCACCCGAAATTGTCAGATTTTGGTCTTGCGAAATTGGGTCCCGTCGGGGATAAAACTCATGTCTCTACACGGGTGATGGGAACCTATGGTTATTGTGCTCCAGAGTATGCGATGACTGGCCAGCTCACCCTAAAGTCAGATGTGTATAGCTTTGGAGTTGTCTTTCTCGAACTTATCACTGGCCGGAAGGCCATTGATAATACTCGAGCTGCGGGAGAGCATAATCTTGTTGCCTGGGCTCGGCCTCTTTTCAAGGATAGACGAAAGTTTCCGAAAATGGCAGACCCGCTATTACAAGGGCGATACCCAATGAGAGGACTTTATCAAGCCCTTGCTGTTGCAGCAATGTGTTTGCAGGAACAAGCAGCCACAAGACCTCTGATAGGGGATGTTGTCACTGCCCTCACTTATTTGGCCTCTCAAACCTATGATCCCAATGCGGTTGGTTCTCAAAGCAATCGCCTTGGTTCATCGACTCCGAGGAACCGAGACGACAGGAGAGGCGGGCCCGATGGACTGGATAGCCCGAACGACCGAGGCTGCCACTTGGGTTCTCCATCAACCCATAAAAACTCTCCTGATTTTAGGAAGAGGGAGCATGCAAGGGAGCTGAGCTCTGGAGGAGAGCTCAGCAAAATGGAAACAGGTGGAGGGTCCGGCAGAAAATGGGGGTTGGACGGGTCGGAATCTCACGAATCGTATCTTTACAGCCCTGTAAATACCGGGAGAGTGCGAGAAACTACGAGGAATCGCGATCTGGATCGAGAACGGGCAGTGGCAGAGGCAAAAGTATGGGGCGAAAATTGGAGGGAGAAGAAGAGAGCAAATTCAGTGGGTAGCTTTGATAGTTCCAACGAGTGA | 1536 | 48.96 | MGGCLPCLRSSVEEGSGDKEATKKESFKDGSAAQIHHITRVGSEKSKSRSSNDAKKESTVPKDGPTAHIAAQTFTFRELAAATKNFKPECLLGEGGFGRVYKGRLESTGQAIAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPQDREPLDWSTRMKIAAGAAKGLEYLHDQANPPVIYRDLKSSNILLEEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAVGSQSNRLGSSTPRNRDDRRGGPDGLDSPNDRGCHLGSPSTHKNSPDFRKREHARELSSGGELSKMETGGGSGRKWGLDGSESHESYLYSPVNTGRVRETTRNRDLDRERAVAEAKVWGENWREKKRANSVGSFDSSNE | 511 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 2136918 | 2139835 | - | Bda001029.1 | Bda13g00167 | 18298 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g00167 | 511 | Gene3D | Phosphorylase Kinase; domain 1 | 41 | 162 | - | - | |
Bda13g00167 | 511 | MobiDBLite | consensus disorder prediction | 371 | 481 | - | - | |
Bda13g00167 | 511 | ProSiteProfiles | Protein kinase domain profile. | 86 | 363 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda13g00167 | 511 | CDD | STKc_IRAK | 92 | 361 | - | - | |
Bda13g00167 | 511 | MobiDBLite | consensus disorder prediction | 384 | 398 | - | - | |
Bda13g00167 | 511 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 209 | 221 | IPR008271 | GO:0004672|GO:0006468 | |
Bda13g00167 | 511 | SMART | serkin_6 | 86 | 363 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda13g00167 | 511 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 379 | - | - | |
Bda13g00167 | 511 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
Bda13g00167 | 511 | ProSitePatterns | Protein kinases ATP-binding region signature. | 92 | 115 | IPR017441 | GO:0005524 | |
Bda13g00167 | 511 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 360 | IPR011009 | - | |
Bda13g00167 | 511 | MobiDBLite | consensus disorder prediction | 13 | 31 | - | - | |
Bda13g00167 | 511 | MobiDBLite | consensus disorder prediction | 40 | 62 | - | - | |
Bda13g00167 | 511 | Pfam | Protein kinase domain | 91 | 299 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda13g00167 | 511 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL27 | 1 | 504 | - | - | |
Bda13g00167 | 511 | MobiDBLite | consensus disorder prediction | 416 | 432 | - | - | |
Bda13g00167 | 511 | PANTHER | OS07G0668900 PROTEIN | 1 | 504 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01078 | Bda-Chr1:45490027 | Bda13g00167 | Bda-Chr13:2136918 | 5.34E-161 | dispersed | |
Bda03g00321 | Bda-Chr3:2745793 | Bda13g00167 | Bda-Chr13:2136918 | 6.54E-145 | dispersed | |
Bda03g00936 | Bda-Chr3:8313653 | Bda13g00167 | Bda-Chr13:2136918 | 0 | dispersed | |
Bda09g00172 | Bda-Chr9:2561771 | Bda13g00167 | Bda-Chr13:2136918 | 2.50E-176 | dispersed | |
Bda09g01487 | Bda-Chr9:46695251 | Bda13g00167 | Bda-Chr13:2136918 | 2.92E-115 | dispersed | |
Bda13g00167 | Bda-Chr13:2136918 | Bda12g00531 | Bda-Chr12:8335639 | 2.63E-120 | dispersed | |
Bda14g00329 | Bda-Chr14:2239592 | Bda13g00167 | Bda-Chr13:2136918 | 7.72E-81 | dispersed | |
Bda15g00885 | Bda-Chr15:14539865 | Bda13g00167 | Bda-Chr13:2136918 | 7.19E-85 | dispersed | |
Bda13g00167 | Bda-Chr13:2136918 | Bda01g00267 | Bda-Chr1:27218381 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69991 | PF00069 | Pkinase | 6.80E-45 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g00167 | - | - | zju:107426910 | 887.1 |