Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00167 ATGGGTGGGTGCCTTCCTTGTTTGAGATCATCCGTGGAAGAGGGTAGTGGGGATAAGGAAGCAACTAAGAAGGAATCGTTCAAGGATGGCTCTGCTGCTCAGATTCACCACATCACCAGGGTTGGCTCAGAAAAATCTAAATCACGAAGCAGTAATGACGCCAAGAAGGAATCAACTGTTCCAAAAGACGGGCCGACGGCTCATATTGCAGCTCAAACCTTCACATTTCGAGAACTTGCAGCTGCAACAAAGAATTTTAAGCCCGAATGCTTACTAGGCGAAGGAGGATTTGGCCGAGTTTACAAAGGTCGTTTAGAGAGCACAGGACAGGCAATTGCTGTAAAACAGCTTGATCGAAATGGCCTCCAAGGAAATCGGGAATTTCTAGTGGAGGTTCTAATGCTGAGTCTTCTACACCATCCAAATCTCGTGAACTTGATTGGCTATTGCGCCGATGGGGATCAACGGCTTCTTGTTTACGAGTTCATGCCATTAGGATCTTTGGAGGATCATTTACATGATCTTCCGCAGGATAGGGAGCCCCTGGATTGGAGCACGAGAATGAAGATTGCAGCCGGTGCAGCAAAGGGATTGGAGTATTTACACGATCAAGCAAACCCTCCAGTTATATACCGAGACTTGAAGTCATCGAACATCCTTCTAGAAGAAGGTTATCACCCGAAATTGTCAGATTTTGGTCTTGCGAAATTGGGTCCCGTCGGGGATAAAACTCATGTCTCTACACGGGTGATGGGAACCTATGGTTATTGTGCTCCAGAGTATGCGATGACTGGCCAGCTCACCCTAAAGTCAGATGTGTATAGCTTTGGAGTTGTCTTTCTCGAACTTATCACTGGCCGGAAGGCCATTGATAATACTCGAGCTGCGGGAGAGCATAATCTTGTTGCCTGGGCTCGGCCTCTTTTCAAGGATAGACGAAAGTTTCCGAAAATGGCAGACCCGCTATTACAAGGGCGATACCCAATGAGAGGACTTTATCAAGCCCTTGCTGTTGCAGCAATGTGTTTGCAGGAACAAGCAGCCACAAGACCTCTGATAGGGGATGTTGTCACTGCCCTCACTTATTTGGCCTCTCAAACCTATGATCCCAATGCGGTTGGTTCTCAAAGCAATCGCCTTGGTTCATCGACTCCGAGGAACCGAGACGACAGGAGAGGCGGGCCCGATGGACTGGATAGCCCGAACGACCGAGGCTGCCACTTGGGTTCTCCATCAACCCATAAAAACTCTCCTGATTTTAGGAAGAGGGAGCATGCAAGGGAGCTGAGCTCTGGAGGAGAGCTCAGCAAAATGGAAACAGGTGGAGGGTCCGGCAGAAAATGGGGGTTGGACGGGTCGGAATCTCACGAATCGTATCTTTACAGCCCTGTAAATACCGGGAGAGTGCGAGAAACTACGAGGAATCGCGATCTGGATCGAGAACGGGCAGTGGCAGAGGCAAAAGTATGGGGCGAAAATTGGAGGGAGAAGAAGAGAGCAAATTCAGTGGGTAGCTTTGATAGTTCCAACGAGTGA 1536 48.96 MGGCLPCLRSSVEEGSGDKEATKKESFKDGSAAQIHHITRVGSEKSKSRSSNDAKKESTVPKDGPTAHIAAQTFTFRELAAATKNFKPECLLGEGGFGRVYKGRLESTGQAIAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPQDREPLDWSTRMKIAAGAAKGLEYLHDQANPPVIYRDLKSSNILLEEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAAGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAVGSQSNRLGSSTPRNRDDRRGGPDGLDSPNDRGCHLGSPSTHKNSPDFRKREHARELSSGGELSKMETGGGSGRKWGLDGSESHESYLYSPVNTGRVRETTRNRDLDRERAVAEAKVWGENWREKKRANSVGSFDSSNE 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2136918 2139835 - Bda001029.1 Bda13g00167 18298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00167 511 Gene3D Phosphorylase Kinase; domain 1 41 162 - -
Bda13g00167 511 MobiDBLite consensus disorder prediction 371 481 - -
Bda13g00167 511 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00167 511 CDD STKc_IRAK 92 361 - -
Bda13g00167 511 MobiDBLite consensus disorder prediction 384 398 - -
Bda13g00167 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Bda13g00167 511 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00167 511 Gene3D Transferase(Phosphotransferase) domain 1 163 379 - -
Bda13g00167 511 MobiDBLite consensus disorder prediction 1 65 - -
Bda13g00167 511 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Bda13g00167 511 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Bda13g00167 511 MobiDBLite consensus disorder prediction 13 31 - -
Bda13g00167 511 MobiDBLite consensus disorder prediction 40 62 - -
Bda13g00167 511 Pfam Protein kinase domain 91 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00167 511 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 504 - -
Bda13g00167 511 MobiDBLite consensus disorder prediction 416 432 - -
Bda13g00167 511 PANTHER OS07G0668900 PROTEIN 1 504 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01078 Bda-Chr1:45490027 Bda13g00167 Bda-Chr13:2136918 5.34E-161 dispersed
Bda03g00321 Bda-Chr3:2745793 Bda13g00167 Bda-Chr13:2136918 6.54E-145 dispersed
Bda03g00936 Bda-Chr3:8313653 Bda13g00167 Bda-Chr13:2136918 0 dispersed
Bda09g00172 Bda-Chr9:2561771 Bda13g00167 Bda-Chr13:2136918 2.50E-176 dispersed
Bda09g01487 Bda-Chr9:46695251 Bda13g00167 Bda-Chr13:2136918 2.92E-115 dispersed
Bda13g00167 Bda-Chr13:2136918 Bda12g00531 Bda-Chr12:8335639 2.63E-120 dispersed
Bda14g00329 Bda-Chr14:2239592 Bda13g00167 Bda-Chr13:2136918 7.72E-81 dispersed
Bda15g00885 Bda-Chr15:14539865 Bda13g00167 Bda-Chr13:2136918 7.19E-85 dispersed
Bda13g00167 Bda-Chr13:2136918 Bda01g00267 Bda-Chr1:27218381 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69991 PF00069 Pkinase 6.80E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00167 - - zju:107426910 887.1