Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda13g00222 | ATGGCGCCGGCTCTGGTTTTGAATCCCGTTTCGCAATCTGGTGGCTCCCGCGATTCTTCCAGCAAGAAAAAGAAGAAGAGGAATCAGAGGAGTAAAGATAATCGCCAATCGCAGAATCACAGGCAATGGAAATCTGAATCTCAACAGCAACTCTACTCGTCCAAACTGGTTCAAGCTCTTTCTCGAATTAGGCTCACCTCCCCCTCTATTTCGTCTTCCAATGAAGCGCCTCGCCGTGGCAGAGCCGTCCGGGAGGCCGCCGACAGAGTCCTAGCCATGGCGGCGAAAGGGCGAACTAGGTGGAGCCGAGCGATTTTGACGAACCGACCCAAGCTAAAGTTTCGGAAACACAAGCGAAAGAGGGCACCTACCCCCGTAAATAGCCACTCAAAGAAACCAAGAGTTGGTGTCTGGAGATTGAAAGGAAAGTGCTTACCGGTAGTCCAGAGGAAAGTTAAGGTTCTCGGCCGGCTAGTTCCCGGTTGCCAGAAGGAACCTTTGCCGGTGATTCTAGAAGAAGTTACTGATTATATCGCGGCTCTTGAGATGCAGGTTCGTGCGATGACCGCTCTGGCTGGCTTGATCTCCGGCGACACTTCCACCGCCGGTTCAACCTCTGCACCACATCGTCGATCTGGTGCTTAG | 645 | 52.87 | MAPALVLNPVSQSGGSRDSSSKKKKKRNQRSKDNRQSQNHRQWKSESQQQLYSSKLVQALSRIRLTSPSISSSNEAPRRGRAVREAADRVLAMAAKGRTRWSRAILTNRPKLKFRKHKRKRAPTPVNSHSKKPRVGVWRLKGKCLPVVQRKVKVLGRLVPGCQKEPLPVILEEVTDYIAALEMQVRAMTALAGLISGDTSTAGSTSAPHRRSGA | 214 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 2828727 | 2829371 | + | Bda001100.1 | Bda13g00222 | 18353 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda13g00222 | 214 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 7 | 208 | - | - | |
| Bda13g00222 | 214 | CDD | bHLH_AtIBH1_like | 139 | 192 | IPR044549 | GO:0006355 | |
| Bda13g00222 | 214 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 7 | 208 | IPR044660 | GO:0006355 | |
| Bda13g00222 | 214 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g01662 | Bda-Chr1:52755973 | Bda13g00222 | Bda-Chr13:2828727 | 3.05E-39 | dispersed | |
| Bda08g00328 | Bda-Chr8:3391480 | Bda13g00222 | Bda-Chr13:2828727 | 3.30E-81 | dispersed | |
| Bda08g01112 | Bda-Chr8:25583817 | Bda13g00222 | Bda-Chr13:2828727 | 7.02E-45 | dispersed | |
| Bda11g00026 | Bda-Chr11:370374 | Bda13g00222 | Bda-Chr13:2828727 | 1.47E-06 | dispersed | |
| Bda11g00495 | Bda-Chr11:5285786 | Bda13g00222 | Bda-Chr13:2828727 | 2.95E-107 | wgd | |
| Bda13g00222 | Bda-Chr13:2828727 | Bda08g00347 | Bda-Chr8:3570660 | 1.84E-07 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda13g00222 | - | - | zju:107418975 | 237.269 |