Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g00231 | ATGGCGCGTCAGAATCTTCTGCATCCAAATTTGTCCCAGTTATTCGTTCTGGTTGTTACACGGACATTGGACCTAGGGAATCCATGGAAGATGAACACATTCAGATTGATGATTTGTCTGTTCATCTTGGTAACTCTCTTCAACTGTCCTTTGCAGGGTGCTTTCTATGCAGTATTTGACGGCCATGGAGGACCCGATGCAGCTGCATTCATCAAGAAGAATGCTCTGAGATTATTTTTTGAAGACGCCGATTTACTCCAAACATCCGACATTGATTCGCTATTCATAAAAGAGTTAGAGAATTCTCATAGGAAAGCATTTTTAGTTGCAGACCTTGCAATGGCTAACGAATGCAGTGTCAGCAGCTCATGTGGAACTACAGCCCTGACAGCCTTTCTTCTCGGAAGACATTTGTTGGTTGCAAATGCCGGAGACTGTCGGGCTGTTCTCTGCAGAAAAGGGATTGCAGTGGAGATGTCAAAGGACCATAGACCGACTAATGCAGTCGAATGCAAGAGAGTTGAGCAGCTAGGCGGCTACATCAATGATGGATATCTTAATGGCTATCTGTCAGTAACCCGAGCTTTGGGCGACTGGGACTTCAAATTCCCCCTCGGCTCCTCCTCACCTCTCATTGCCGAACCAGAGTTTGAACACGTTAAGCTAACAGAAGAGGACGAATTCTTGATCATTGGTTGCGATGGTGTATGGGACGTAATGTCAAGTCAGTATGCAGTTAGTCTCGTCCGACGGGGATTAAGAAGGCATAACGACCCTCGGCAAAGCGCTAAAGAAGTAGTTGCTGAAGCTCTCCGGCTCAGCACATCTGATAATCTTACAGTGATTGTGATTAGTTTTTGTCCTCCCAGCCGAATAATCGAGTCAAGCCCCGGTCGACCACAGAGGCTCAGGTTCTGTAATACATCGCAAAGAGCCCACAAGTAA | 945 | 46.35 | MARQNLLHPNLSQLFVLVVTRTLDLGNPWKMNTFRLMICLFILVTLFNCPLQGAFYAVFDGHGGPDAAAFIKKNALRLFFEDADLLQTSDIDSLFIKELENSHRKAFLVADLAMANECSVSSSCGTTALTAFLLGRHLLVANAGDCRAVLCRKGIAVEMSKDHRPTNAVECKRVEQLGGYINDGYLNGYLSVTRALGDWDFKFPLGSSSPLIAEPEFEHVKLTEEDEFLIIGCDGVWDVMSSQYAVSLVRRGLRRHNDPRQSAKEVVAEALRLSTSDNLTVIVISFCPPSRIIESSPGRPQRLRFCNTSQRAHK | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 2890588 | 2891532 | - | Bda001110.1 | Bda13g00231 | 18362 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g00231 | 314 | Pfam | Protein phosphatase 2C | 49 | 278 | IPR001932 | - | |
Bda13g00231 | 314 | ProSiteProfiles | PPM-type phosphatase domain profile. | 18 | 286 | IPR001932 | - | |
Bda13g00231 | 314 | SMART | PP2C_4 | 20 | 284 | IPR001932 | - | |
Bda13g00231 | 314 | SUPERFAMILY | PP2C-like | 48 | 286 | IPR036457 | - | |
Bda13g00231 | 314 | PANTHER | PROTEIN PHOSPHATASE 2C-LIKE PROTEIN | 46 | 307 | - | - | |
Bda13g00231 | 314 | ProSitePatterns | PPM-type phosphatase domain signature. | 55 | 63 | IPR000222 | GO:0043169 | |
Bda13g00231 | 314 | Gene3D | - | 39 | 288 | IPR036457 | - | |
Bda13g00231 | 314 | CDD | PP2Cc | 41 | 286 | IPR001932 | - | |
Bda13g00231 | 314 | PANTHER | PROTEIN PHOSPHATASE 2C | 46 | 307 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g00413 | Bda-Chr5:49739424 | Bda13g00231 | Bda-Chr13:2890588 | 7.40E-105 | dispersed | |
Bda13g00231 | Bda-Chr13:2890588 | Bda13g01275 | Bda-Chr13:35110645 | 1.14E-67 | dispersed | |
Bda12g00106 | Bda-Chr12:854926 | Bda13g00231 | Bda-Chr13:2890588 | 8.02E-106 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g00231 | K14803 | - | mnt:21408816 | 399.438 |