Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g00252 | ATGGTCTCTTTATATTCGAATATTGTTCTTGCTGTTTTACTCTGTTTTATCATATGCTATGTTTCAGGAGATGCTCTATATGCTTTGAGAAACTCACTAAATGCTACAGCAAATCAACTCACAGATTGGAACCCAAATCAAGTTAACCCATGCACTTGGTCCAATGTTATTTGCACCGACAATCTCGTAACTTCTGTATCATTGTCGTCAATGGGATTCACAGGAACCTTGTCCTCAAAAGTTGGAGCTCTAAAATCTCTCAACACTCTAAATTTACAAGGAAATTACATTACTGGTGAAATACCTGATGAGCTTGGAAATATTACGAGTTTGGTGAGCTTGGATTTGGAAAACAACAAGTTAACAGGTCAAATACCATCCTCCCTTGGAAATCTTATGAGACTTCAGTTCTTGACACTGAGTCAAAATAATCTTTCAGGGACCATTCCTGAGTCACTTTCACTTCTTCCGGGCCTGATAAATATTTTGCTCGATTCAAATAATCTCAGTGGTCCAATTCCGGAAAAATTATTTCGAATTCCAAAATATAAGTATGAAAAAATTTGTGATGGAGTTTTGAATTGTTATTATGGAATTTCAATCTTGGGTTTTTTATTTTATTTTTGTGTTGGCTCATTTTTCCACTTGTTGACAGGCAGTTCACACAAGCCGAAAATTGGCATTATAGTTGGGCTTGTTGGAGGGTTTGCAATTATTCTCTTTTTGGGTGGATTTTTATTTTGTCTTTGCAGAGGTAGACACAAAGGTTGCAAGCGTGAAATTTTTGTGGATGTCGCAGGCGAAGTTGACCGAAGAATCGCATTTGGTCAACTGAAAAGATTTGCATGGAGAGAGTTACAGTTAGCAACAGACAATTTCAGCAAGAAAAACGTGTTGGGACAAGGAGGATTCGGAAAGGTTTACAAAGGGGTGCTTTCCGACAACACGAAAATTGCAGTGAAACGCCTCACCGACTACGAAAGCCCAGGAGGAGATGCAGCCTTCCAACGAGAAGTTGAGATGATTAGTGTAGCCGTTCATAGGAATCTACTACGACTCATCGGATTCTGCACCACGACAACAGAACGCCTTCTGGTTTATCCCTTCATGCAAAACTTAAGCGTTGCCTATCAACTAAGAGAAATTAAACCTGGAGATCCTGTTTTGGATTGGCCTACGAGAAAGCGAATTGCCTTAGGCACCGCTAGGGGATTGGAGTATCTTCACGAGCATTGCAATCCGAAGATCATTCATCGTGATGTTAAGGCCGCTAATGTGTTGCTTGATGAGGATTTTGAAGCAGTTGTAGGCGATTTCGGTTTGGCAAAGTTGGTAGATGTTCGGAAGACTAACGTGACCACTCAAGTACGAGGAACAATGGGTCACATAGCCCCCGAGTACTTGTCGACAGGAAAGTCGTCGGAAAGGACTGATGTTTTTGGTTATGGCATCATGTTGTTGGAACTTGTGACCGGTCAACGGGCAATTGACTTTTCGCGGTTGGAAGAAGAAGACGATGTTTTACTGCTAGACCATGTCAAGAAGCTGGAACGGGAGAAGAAACTGGACGCCATCGTCGACAACAACCTCGATAAAAACTATAACATCGAAGAGGTGGAAATGATGATTCAAGTTGCGTTGCTTTGCACCCAACCATCACCGGACGAGAGGCCAGCCATGTCAGAGGTGGTCCGAATGCTGGAAGGAGAGGGGCTCGCAGAGAGATGGGAAGAATGGCAACACGTAGAAGTATCTCGGCGAGAGGAATACGAGAGGTTGCAGAGAAGATTTGATTGGGGCGAAGATTCAATTTACAACCAAGATGCTATTCAATTATCCGGAGGAAGATGA | 1851 | 42.25 | MVSLYSNIVLAVLLCFIICYVSGDALYALRNSLNATANQLTDWNPNQVNPCTWSNVICTDNLVTSVSLSSMGFTGTLSSKVGALKSLNTLNLQGNYITGEIPDELGNITSLVSLDLENNKLTGQIPSSLGNLMRLQFLTLSQNNLSGTIPESLSLLPGLINILLDSNNLSGPIPEKLFRIPKYKYEKICDGVLNCYYGISILGFLFYFCVGSFFHLLTGSSHKPKIGIIVGLVGGFAIILFLGGFLFCLCRGRHKGCKREIFVDVAGEVDRRIAFGQLKRFAWRELQLATDNFSKKNVLGQGGFGKVYKGVLSDNTKIAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTTTERLLVYPFMQNLSVAYQLREIKPGDPVLDWPTRKRIALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKKLDAIVDNNLDKNYNIEEVEMMIQVALLCTQPSPDERPAMSEVVRMLEGEGLAERWEEWQHVEVSRREEYERLQRRFDWGEDSIYNQDAIQLSGGR | 616 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 3193202 | 3197230 | + | Bda001133.2 | Bda13g00252 | 18383 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g00252 | 616 | Gene3D | Phosphorylase Kinase; domain 1 | 262 | 369 | - | - | |
Bda13g00252 | 616 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 8 | 616 | - | - | |
Bda13g00252 | 616 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 8 | 616 | - | - | |
Bda13g00252 | 616 | ProSiteProfiles | Protein kinase domain profile. | 293 | 572 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda13g00252 | 616 | SUPERFAMILY | Protein kinase-like (PK-like) | 273 | 568 | IPR011009 | - | |
Bda13g00252 | 616 | SUPERFAMILY | L domain-like | 24 | 183 | - | - | |
Bda13g00252 | 616 | Pfam | Leucine rich repeat N-terminal domain | 23 | 58 | IPR013210 | - | |
Bda13g00252 | 616 | Gene3D | Ribonuclease Inhibitor | 21 | 192 | IPR032675 | - | |
Bda13g00252 | 616 | Pfam | Protein kinase domain | 294 | 565 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda13g00252 | 616 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 416 | 428 | IPR008271 | GO:0004672|GO:0006468 | |
Bda13g00252 | 616 | SMART | serkin_6 | 293 | 567 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda13g00252 | 616 | ProSitePatterns | Protein kinases ATP-binding region signature. | 299 | 321 | IPR017441 | GO:0005524 | |
Bda13g00252 | 616 | Gene3D | Transferase(Phosphotransferase) domain 1 | 370 | 587 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g01102 | Bda-Chr6:39196892 | Bda13g00252 | Bda-Chr13:3193202 | 0 | dispersed | |
Bda07g00862 | Bda-Chr7:10042140 | Bda13g00252 | Bda-Chr13:3193202 | 5.16E-21 | dispersed | |
Bda09g00911 | Bda-Chr9:25761206 | Bda13g00252 | Bda-Chr13:3193202 | 2.69E-165 | dispersed | |
Bda11g01277 | Bda-Chr11:13373417 | Bda13g00252 | Bda-Chr13:3193202 | 2.73E-121 | dispersed | |
Bda13g00252 | Bda-Chr13:3193202 | Bda11g01113 | Bda-Chr11:11007129 | 2.48E-86 | dispersed | |
Bda13g00252 | Bda-Chr13:3193202 | Bda03g00411 | Bda-Chr3:3543626 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69994 | PF00069 | Pkinase | 6.80E-43 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g00252 | - | - | csv:116403405 | 929.472 |