Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00254 ATGGATAAAGACAAATATCAAGGCCATGGTGGAGGTTTTCCGCCACCTTCGGGTCGACACGGAGGGTTTTCACCTACTGGAAGTAATTATAATGTTAAATCTGAGTCTTCCTCCTCGTCAATGTCATTTCCGCCCATGGCTCTTGGTGTAAGTTTCGACACTGGTCATCTCGCTCATGTGTCCGATTCCAATCGTTTCAGCCATGATATTAGTCGAATGCCTGAAAATCCCCGAAAACATATGGGTCATCGACGCGCTCATTCTGAAATCTTGACTCTTCCTGATGATATTAGTTTTGATAGTGATCTAGGAGTTGTGGGTGGGATTGATGGTCCTTCAATGTCTGATGAAACTGAGGAAGATTTGTTATCTATGTATCTTGATATGGATAAATTCAATTCATCATCTGCTTCATCGGCATTTGGATTGGGTGAGCCCTCTACTACTGCTGCAGCCATATCTGTGCCATTGAGGGGAGCTTTGACTTCGTCGGCTGAGAATGTTGCCTTGGCTTCTAATGAGAGGCCTAGAGTTAGACACCAGCATAGCCAGTCCATGGATGGGTCAACGACCATCACACCAAAGACTCTTGTGTCTGGATCTGAAGAACTCTCAGAAGCTGACTGTAAGAAGGCTATGTCAGCTGCTAATTTAGCGGAGCTGGCCATAATTGATCCAAAACGAGCAAAGAGGATCTGGGCAAATAGACAGTCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCCGAGTTGGAACGAAAAGTACAGACCTTACAAACAGAAGCAACTTCTTTATCTGCTCAGTTGACCTTACTGCAGAGAGATACTGATGGTCTCACTGCTGAGAATAGTGAATTGAAACTGCGGTTGCAAACAATGGAGCAACAGGTCCACCTACAAGATGCTTTGAATGATGCTCTTAAAGAAGAAATTCAGCATCTGAAAGCACTGACTGGACAATCCACAAATGGCGGATCTTTGATGAATTTTGCCTCTTTAGGAGGCAGCCATGGGCAGCAGCAACTGTATCCAAACAGTCACGCTATGCAGACTCTTTTGACGGCACAGCAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAACAGTTTCAGCAGCACCAGCTACATCACCTTCAACAACAGCAAATGCAGCAACAACTTGCTGCAGAAATGAAACTAAGGACACCCGTTTTCTCTCCGACCCCAAAAGATAATAATGGTTCAGATGTGAGCACTTCTGCTTCAAATGACTGCTGA 1773 46.08 MDKDKYQGHGGGFPPPSGRHGGFSPTGSNYNVKSESSSSSMSFPPMALGVSFDTGHLAHVSDSNRFSHDISRMPENPRKHMGHRRAHSEILTLPDDISFDSDLGVVGGIDGPSMSDETEEDLLSMYLDMDKFNSSSASSAFGLGEPSTTAAAISVPLRGALTSSAENVALASNERPRVRHQHSQSMDGSTTITPKTLVSGSEELSEADCKKAMSAANLAELAIIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTDGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKALTGQSTNGGSLMNFASLGGSHGQQQLYPNSHAMQTLLTAQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQLQIQSQKQQQFQQHQLHHLQQQQMQQQLAAEMKLRTPVFSPTPKDNNGSDVSTSASNDC 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3223467 3227157 + Bda001135.1 Bda13g00254 18385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00254 590 MobiDBLite consensus disorder prediction 1 42 - -
Bda13g00254 590 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 372 - -
Bda13g00254 590 MobiDBLite consensus disorder prediction 22 42 - -
Bda13g00254 590 CDD bZIP_plant_RF2 228 277 IPR044759 GO:0003700|GO:0006355
Bda13g00254 590 SUPERFAMILY Leucine zipper domain 227 277 IPR046347 GO:0003700|GO:0006355
Bda13g00254 590 Pfam bZIP transcription factor 227 283 IPR004827 GO:0003700|GO:0006355
Bda13g00254 590 SMART brlzneu 223 287 IPR004827 GO:0003700|GO:0006355
Bda13g00254 590 Coils Coil 243 312 - -
Bda13g00254 590 Gene3D - 226 300 - -
Bda13g00254 590 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 372 - -
Bda13g00254 590 MobiDBLite consensus disorder prediction 571 590 - -
Bda13g00254 590 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 288 IPR004827 GO:0003700|GO:0006355
Bda13g00254 590 MobiDBLite consensus disorder prediction 562 590 - -
Bda13g00254 590 MobiDBLite consensus disorder prediction 172 195 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00476 Bda13g00254 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00254 Bda-Chr13:3223467 Bda14g00204 Bda-Chr14:1426835 2.10E-53 dispersed
Bda11g00476 Bda-Chr11:4994943 Bda13g00254 Bda-Chr13:3223467 3.50E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16858 PF00170 bZIP_1 8.30E-09 CL0018 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00254 - - qsu:112034768 525.783