Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00293 ATGGCTGGGATTCGGAGGATGAAGCTCGGTTCTCAGGGTCTAGAAGTGTCTGCCCAAGGCTTTGGATGCATGGGTATGTCTGCCTTTTACGGCGACCCTAAGCCGGATTCCGATATGATTGGTCTGATCCATCACGCCATAGCCGCTGGAGTCACCTTCTTTGATACTTCTGATATTTACGGTCCTTTTACGAACGAAATCCTTTTGGGGAAGGCTCTCAAAGGAGTGCGGGAGAAAGTTGAGTTGGCAACCAAATTCGGTATTTCTTTCGCCGATGGGAAGGGAAAGAGGGAGATACGCGGTGATCCAGCCTATGTGAGAGCCGCCTGCGAGGCGAGCCTGAAGCGGCTCGATATCGATTGCATTGATCTATATTATCAGCATCGGATTGACACTAAGGTCCCGATTGAAATCACGATTGGGGAGCTGAAGAAACTAGTTGAAGAGGGTAAAATCAAGTACATTGGTCTATCCGAAGCCTCAGCTTCCACCATTAGAAGAGCTCATGCTGTTCATCCGATAACAGCAGTGCAGCTGGAATGGTCCTTGTGGTCACGAGATGTTGAAGAAGATATAATTCCAACCTGCAGGGAGCTTGGTATTGGAATTGTGGCCTACAGTCCTCTTGGTCGAGGATTCTTATCAGCTGGACCTAAGTTTGTCGAAGAGCTCAACAGCAACGATTTTCGAAAGTTTCTGCCAAGGTTTCAACCTGAAAATCTCGAGCATAACCAAACTATATTTGAGCGGGTTGGCAAAATGGCATCGAGGAAAGGATGCACGACTGCGCAGCTGGCTCTGGCCTGGGTCCACAACCAAGGCGACGATGTCTGCCCCATTCCGGGGACGACAAAGGTTGTAAATTTTGAGCAAAACATCGGGGCATTGACCGTGAAATTGACGGCAGAAGAAATGGCAGAGCTCGAATCCTTCGCGTCGGCAGATGCTGTTAAGGGTGATCGATATGGGAGTGGAATAGCTACTTGGAAGGAGTCCGAGACGCCTCCGCTTTCTTCAGATATTGGATTGTTGACAGGAATGGCTGGGGTTCGGAGGATGAAGCTCGGTTCTCAGGGTCTGGAAGTTTCTGCCCAAGGCCTTGGATGCATGGGTATGTCTGCCTTTTACGGCGAACCTAAGCCGGATTCCGACAATACTGCTCTGATCCACCACGCCATAGCCGCTGGAGTCACCTTCCTCGATAGTTCTGATATTTACGGTCCTTTTACGAACGAAATCCTTTTGGGGAAGGCTCTCAAAGAAGGAGTGCGGGAGAAAGTTGAGTTGGCGACCAAATTCGGTATTTCTCTCGCCGATGGGAAGAGGGAGATACGCGGTGATCCAGCCTATGTGAGAGCCGCCTGCGAAGCGAGCCTGAAGCGGCTCGATATCGATTGCATTGATCTATATTATCAGCATCGGATTGACACTAAGGTCCCGATTGAAATCACGATTGGGGAGCTGAAGAAACTAGTTGAAGAGGGTAAAATCAAGTACATTGGTCTATCCGAAGCCTCAGCTTCCACCATTAGAAGAGCTCATGCTGTTCATCCGATAACAGCAGTGCAGCTGGAATGGTCCTTGTGGTCACGAGATGCGGAAGAAGACATAATTCCAACCTGCAGGGAGCTTGGTATTGGAATTGTGGCCTACAGTCCTCTTGGTCGAGGATTCTTATCAGCTGGACCTAAGTTTGTCGAAGAGCTCAACAGCAACGATTTTCGAAAGTTTCTGCCAAGATTTCAACCTGAAAATCTCGAGCATAACCAAACTATATTTGAGCGGGTTAGCAAAATGGCATCAAGGAAAGGATGCACGACTGCGCAGCTGGCTCTGGCCTGGGTCCACCACCAAGGCGACGATGTCTGCCCCATTCCGGGGACGACAAAGGTGGTAAATTTTGAGCAAAACATCGGGGCATTGACCGTGAAATTGACGGCAGAAGAAATGGCAGAGCTCGAATCCTTCGCGTCGGCAGATGCTGTTAAGGGTGATCGATATGGGAGCGGAATAGCTACTTGGAAGGAGTCCGAGACGCCTCCGCTTTCGTCTTGGGAGGCCTGA 2064 49.81 MAGIRRMKLGSQGLEVSAQGFGCMGMSAFYGDPKPDSDMIGLIHHAIAAGVTFFDTSDIYGPFTNEILLGKALKGVREKVELATKFGISFADGKGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTKVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLSAGPKFVEELNSNDFRKFLPRFQPENLEHNQTIFERVGKMASRKGCTTAQLALAWVHNQGDDVCPIPGTTKVVNFEQNIGALTVKLTAEEMAELESFASADAVKGDRYGSGIATWKESETPPLSSDIGLLTGMAGVRRMKLGSQGLEVSAQGLGCMGMSAFYGEPKPDSDNTALIHHAIAAGVTFLDSSDIYGPFTNEILLGKALKEGVREKVELATKFGISLADGKREIRGDPAYVRAACEASLKRLDIDCIDLYYQHRIDTKVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFLSAGPKFVEELNSNDFRKFLPRFQPENLEHNQTIFERVSKMASRKGCTTAQLALAWVHHQGDDVCPIPGTTKVVNFEQNIGALTVKLTAEEMAELESFASADAVKGDRYGSGIATWKESETPPLSSWEA 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3672559 3680908 + Bda001179.1 Bda13g00293 18424

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00293 687 Gene3D - 4 338 IPR036812 -
Bda13g00293 687 Gene3D - 350 683 IPR036812 -
Bda13g00293 687 SUPERFAMILY NAD(P)-linked oxidoreductase 352 659 IPR036812 -
Bda13g00293 687 SUPERFAMILY NAD(P)-linked oxidoreductase 5 314 IPR036812 -
Bda13g00293 687 CDD AKR_AKR13D1 5 308 - -
Bda13g00293 687 PANTHER AUXIN-INDUCED PROTEIN PCNT115-LIKE 4 340 - -
Bda13g00293 687 CDD AKR_AKR13D1 351 653 - -
Bda13g00293 687 PANTHER AUXIN-INDUCED PROTEIN PCNT115-LIKE 348 685 - -
Bda13g00293 687 Pfam Aldo/keto reductase family 23 311 IPR023210 -
Bda13g00293 687 Pfam Aldo/keto reductase family 369 656 IPR023210 -
Bda13g00293 687 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 4 340 - -
Bda13g00293 687 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 348 685 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00293 - - - qsu:111998054 590.497
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01206 Bda-Chr7:14454569 Bda13g00293 Bda-Chr13:3672559 6.01E-98 dispersed
Bda12g00374 Bda-Chr12:4284031 Bda13g00293 Bda-Chr13:3672559 3.75E-29 dispersed
Bda13g00293 Bda-Chr13:3672559 Bda13g00295 Bda-Chr13:3686935 0 dispersed
Bda15g00795 Bda-Chr15:11839104 Bda13g00293 Bda-Chr13:3672559 6.25E-12 dispersed
Bda13g00293 Bda-Chr13:3672559 Bda13g00294 Bda-Chr13:3683222 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1079 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo02g00415 . . Bda13g00293 . Bpe13g00748 Bma02g00999 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002127 3 2 5 3 1 1 2 1 1 4 1 1 2 2 2 1 2 3 2 1 3 3 2 3 3 2 1 1 2 5 65