Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00324 ATGTCAGTGTACGATTCTGCATTTGTAAGTACGGAGCTCTCCAAGCCAACATCGATTTTTGGCCTCCGATTATGGGTGGTAATCGGAATTTTAATAGGCACCCTCATAGTTCTCGCCCTCTTCCTACTCTCTCTCTGTCTCACATCCCGAAAACGGAGCCGAAATCGAGGGCAAAATCACATGCTTAAATCCGCCACCTCTCACTCCACTCCGGCGGTTTCCAAAGAGATCCAAGAAATCGTGCACCACGCCGCGCCAGATCACCACCATCCACTGCCAGAAATCCATGTCGAGATCGGAAAAGTGGAGCACCGGGTGGTTTTCTCGGACAGGCTCTCTAGTGGCGAGAGCCGCGCCGGTGTTAGTGAAACTACTTCATTTGGATCCGGTACTGTCGGACCCGAGGTTTCGCACCTTGGTTGGGGTAGATGGTATACACTGAGAGAGCTTGAGGCTGCAACTAATGGATTGTGCGAAGAAAATGTGGTTGGAGAAGGAGGATATGGGATAGTCTACCGAGGTGTTTTAGAGGATGGTACGAGAATTGCCGTCAAGAATCTTCTCAACAACAGGGGTCAAGCAGAGAAGGAATTTAGAGGGGAAGTTGAAGCAATTGGTCGTGTGAGACATAAGAATCTTGTAAGGTTACTTGGATACTGCGTTGAGGGTGCATACAGAATGCTTGTCTATGAGTATGTAGACAATGGTAATCTAGATCAATGGCTTCATGGTGATGTTGGTGAGATCAGTCCCCTAACTTGGGATATTCGTATGAACATTATCTTAGGACCAGCTAAAGGATTGGCCTACCTTCATGAAGGTCTTGAACCCAAAGTCGTTCATCGTGACGTAAAATCTAGCAACATTTTACTAGATCGCCAATGGCATCCTAAGGTTTCTGATTTTGGGCTTGCTAAACTCCTACACTCTGAGAGGAGTTATGTGACGACTCGTGTGATGGGAACATTTGGTTATGTCGCCCCTGAATATGCTTGCACTGGAATGCTGAATGAGAAGAGCGATATATATAGCTTTGGAATACTAATCATGGAACTAATTTCTGGACGGACTCCAGTTGATTACAATAGACCTAAAGGAGAGATCAATTTGGTGGAGTGGTTAAAAACCATGGTTGGGAACCGAAAATCGGAAGAAGTAGTTGATCCCAAGTTGCCTGAAATGCCTTCTTCAAAAGCACTTAAACGGGTTTTGCTTGTTGCTCTTCGATGTGTTGATCCTGACGCCACAAAGAGGCCTAAAATGGGACATATTATACACATGCTTGAGGCAGATGACCTCCTATTTCGTGATGAACGGCGCTCTGGGAAAGAGTCGTCCCGCGTAATTATCAATAATCAACTAGAGATTCATGACATTGGAGAAAATGAACGTGGAGGCGAAGGGCCATCTAATCGATCCGAACATAAAAATGGTGGAAACCTTAGTCAGCCAAATAGGTGGAGATAA 1467 45.67 MSVYDSAFVSTELSKPTSIFGLRLWVVIGILIGTLIVLALFLLSLCLTSRKRSRNRGQNHMLKSATSHSTPAVSKEIQEIVHHAAPDHHHPLPEIHVEIGKVEHRVVFSDRLSSGESRAGVSETTSFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVVGEGGYGIVYRGVLEDGTRIAVKNLLNNRGQAEKEFRGEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDVGEISPLTWDIRMNIILGPAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWHPKVSDFGLAKLLHSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMELISGRTPVDYNRPKGEINLVEWLKTMVGNRKSEEVVDPKLPEMPSSKALKRVLLVALRCVDPDATKRPKMGHIIHMLEADDLLFRDERRSGKESSRVIINNQLEIHDIGENERGGEGPSNRSEHKNGGNLSQPNRWR 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4119803 4122392 - Bda001214.1 Bda13g00324 18455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00324 488 Pfam Protein kinase domain 160 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00324 488 ProSiteProfiles Protein kinase domain profile. 157 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00324 488 CDD STKc_IRAK 163 429 - -
Bda13g00324 488 PANTHER OS01G0323000 PROTEIN 2 447 - -
Bda13g00324 488 MobiDBLite consensus disorder prediction 459 488 - -
Bda13g00324 488 SUPERFAMILY Protein kinase-like (PK-like) 136 429 IPR011009 -
Bda13g00324 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Bda13g00324 488 MobiDBLite consensus disorder prediction 473 488 - -
Bda13g00324 488 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 447 - -
Bda13g00324 488 Gene3D Transferase(Phosphotransferase) domain 1 233 444 - -
Bda13g00324 488 Gene3D Phosphorylase Kinase; domain 1 139 232 - -
Bda13g00324 488 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Bda13g00324 488 SMART serkin_6 157 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01098 Bda-Chr8:24441036 Bda13g00324 Bda-Chr13:4119803 8.18E-169 dispersed
Bda08g01371 Bda-Chr8:54296712 Bda13g00324 Bda-Chr13:4119803 0 dispersed
Bda13g00324 Bda-Chr13:4119803 Bda14g01440 Bda-Chr14:18817693 1.85E-154 dispersed
Bda13g00324 Bda-Chr13:4119803 Bda01g01658 Bda-Chr1:52705869 3.87E-177 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69997 PF00069 Pkinase 2.20E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00324 - - csv:101219288 775.393