Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00491 ATGGGTGGTGAAGGAAAAGTGTTCTCCTTGCGAGAAGTCTCGGAGCACAACACGCCCAGGGACTGTTGGCTAATCATCAATGGCAAAGTGTATAATGTGACCAACTTCTTGGAAGACCATCCCGGCGGCGATGAAGTTCTGTTATCTGCTACAGGAAAGGACGCAACTGATGATTTTGAAGATGTTGGTCATAGTGACAGTGCAAGAGAAATGATGAGCAAATACTATGTTGGTGAGATAGATTCTTCGACTATTCCGAAAAAAACAACATATATTCCTCCAAAACAGCCTCACTACAATCAGGATAAGACATCTGAATTCATTGTCAAGCTCCTCCAATTCCTCGTTCCGCTTGCTATACTGGGATTGGCTGTCGGAGTGCGCTTCTACACAAAATCAAGCTGA 405 44.2 MGGEGKVFSLREVSEHNTPRDCWLIINGKVYNVTNFLEDHPGGDEVLLSATGKDATDDFEDVGHSDSAREMMSKYYVGEIDSSTIPKKTTYIPPKQPHYNQDKTSEFIVKLLQFLVPLAILGLAVGVRFYTKSS 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5773805 5775700 + Bda001397.1 Bda13g00491 18622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00491 134 PANTHER CYTOCHROME B5 1 132 - -
Bda13g00491 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Bda13g00491 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Bda13g00491 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Bda13g00491 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Bda13g00491 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Bda13g00491 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 93 IPR036400 -
Bda13g00491 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Bda13g00491 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Bda13g00491 134 Gene3D - 3 86 IPR036400 -
Bda13g00491 134 PANTHER BNAC04G43300D PROTEIN 1 132 - -
Bda13g00491 134 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00091 Bda-Chr8:825471 Bda13g00491 Bda-Chr13:5773805 1.73E-47 dispersed
Bda13g00400 Bda-Chr13:4962212 Bda13g00491 Bda-Chr13:5773805 3.09E-51 dispersed
Bda13g00491 Bda-Chr13:5773805 Bda13g01500 Bda-Chr13:38038976 3.23E-18 dispersed
Bda04g00888 Bda-Chr4:58634581 Bda13g00491 Bda-Chr13:5773805 3.69E-12 transposed
Bda05g00891 Bda-Chr5:57337444 Bda13g00491 Bda-Chr13:5773805 2.54E-53 transposed
Bda07g01952 Bda-Chr7:36938338 Bda13g00491 Bda-Chr13:5773805 4.40E-67 transposed
Bda11g00353 Bda-Chr11:3925250 Bda13g00491 Bda-Chr13:5773805 1.04E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00491 K23490 - qsu:112039863 254.603