Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00495 ATCTTTTCATCACCGGAAAACATGTCAACGTTCTTACTCGCTTTCCTCCTCCTCTTAGACATGGCTACATCCACCTTCACCCTCCAACAACCCAACCCACTTCAAATGGCTCAAACCACAGTCACTGCAGCCAGAACCTGGGTCCAAGCCTCCATCCAATCGACGCCAGGCCATGGTTCTGAAATGGAGGACGTTGCCTTACTGGACTGCTTGAAGGTTTACGAGAAAAGCGAGTCTCTGCTGGCCCGGCTTCTACTCGGCCAGGCCCTCAGCCTCAACGACGCGGCCACCTGGCTTAGTGCCGTTGTTGCGAACCACGGGAGTTGCTTGCATAGTTTGAGGGAGAAGGGCTTCGTTGAGACTCATCTTCCTCCCGTGGCCCAAAATTTGACCAGTTTACTCAGTCAAGCTCTTCAATATGGTTTATTCACGAAAGCATTTCCTCAAATTGATGCAGGAGGGCTGGAAGAAGAGAGGCTGAGCAGAAATGGAGGAGGACTACTAGCAACGTGGAATGCAGCAACTTCGAGGGCAGATTTTGTAGTGGCCAAGGATGGATCAGGCACTCACAGAACAATCAACGAGGCGGTGGCTCAGCTGAGAAAAATGGGTAAAATAAGAGGAGATGGAAGAGTGATAATATATGTGAAATCTGGAGTTTACAGTGAGAGAGTGGAGATAGAAAGAGAAATGAAGAATGTCATGTTTGTAGGGGATGGCATGGACAAGACTATAGTCACTGCAAGTTCAAACGTCCCTGATGGTGCCACCACTTTTAGTTCTGCAACGTTTGGCGTATCTGGGGACGGATTTTGGGCTAGGGACGTGACATTTGAGAACACAGCTGGTCCACATAAGGACCAAGCAGTGGCACTGAGGGTGAGCTCAGACTTGTCGATATTTTATCGATGCGGAATCAAAGGATACCAAGACACCATCTTCGTACACACACTTCGCCAATTCTACCGAGACTGTGAGATTCACGGCACCATCGATTTCATATTCGGCGACGCTCCGGCGGTGCTCCAAAACTGCGACATTCTCGTGAGGAAACCGATGGAACACCAAGCAAACATGATCACAGCCCAAGGGAGAGAAAACCCTAATGAAAACACAGGAATTGCAATCCATAACTCACGTGTTAGGCCAGCAGCTGACTTCATGGCTGTGAAGAACTCCTTCAAAACTTACTTGGGGAGGCCATGGAAGAAGTATTCAAGAACTGTGTTTATCAAAACAGATTTAGATGGAATGATTGACCCAAAGGGTTGGAGAGAATGGGATGGAAATTTTGCTCTTTCAACGTTGTATTACGGGGAATATATGAACACCGGAGTCGGAGCTTCAACCACGAATAGAATAAGATGGCATGGTTTTCATGTTCTTCGCAGTCCATCGGAGGCTGAGCCATTCTTGGTTAGTCGTTTCATTCAAGGCGAGTCTTGGATTCCGGCGACCGGAGTGCCTTGTTGGCTTGGAATTTGA 1485 48.22 IFSSPENMSTFLLAFLLLLDMATSTFTLQQPNPLQMAQTTVTAARTWVQASIQSTPGHGSEMEDVALLDCLKVYEKSESLLARLLLGQALSLNDAATWLSAVVANHGSCLHSLREKGFVETHLPPVAQNLTSLLSQALQYGLFTKAFPQIDAGGLEEERLSRNGGGLLATWNAATSRADFVVAKDGSGTHRTINEAVAQLRKMGKIRGDGRVIIYVKSGVYSERVEIEREMKNVMFVGDGMDKTIVTASSNVPDGATTFSSATFGVSGDGFWARDVTFENTAGPHKDQAVALRVSSDLSIFYRCGIKGYQDTIFVHTLRQFYRDCEIHGTIDFIFGDAPAVLQNCDILVRKPMEHQANMITAQGRENPNENTGIAIHNSRVRPAADFMAVKNSFKTYLGRPWKKYSRTVFIKTDLDGMIDPKGWREWDGNFALSTLYYGEYMNTGVGASTTNRIRWHGFHVLRSPSEAEPFLVSRFIQGESWIPATGVPCWLGI 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5829495 5832006 + Bda001401.1 Bda13g00495 18626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00495 494 SUPERFAMILY Pectin lyase-like 174 492 IPR011050 -
Bda13g00495 494 ProSitePatterns Pectinesterase signature 2. 327 336 IPR033131 -
Bda13g00495 494 Pfam Plant invertase/pectin methylesterase inhibitor 35 138 IPR006501 GO:0004857
Bda13g00495 494 CDD PMEI-like_4 27 138 - -
Bda13g00495 494 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 141 IPR035513 -
Bda13g00495 494 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 138 IPR035513 -
Bda13g00495 494 Gene3D - 173 494 IPR012334 -
Bda13g00495 494 PANTHER PECTINESTERASE 10 493 - -
Bda13g00495 494 Pfam Pectinesterase 179 480 IPR000070 GO:0030599|GO:0042545
Bda13g00495 494 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 10 493 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00433 Bda-Chr13:5277364 Bda13g00495 Bda-Chr13:5829495 0 dispersed
Bda13g00495 Bda-Chr13:5829495 Bda15g00760 Bda-Chr15:11202090 1.37E-139 dispersed
Bda13g00493 Bda-Chr13:5820585 Bda13g00495 Bda-Chr13:5829495 1.19E-129 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00495 K01051 - zju:107406889 602.053