Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda13g00540 | ATGATTGTGAGCTCTATCTGCAATGCAGGCGCCAGATTATCGGGAGAAGAAGTGATGGAGATTGGGAAAATGATGGAACACAAGAGATGTCCTTACTCTGCTGATGAAAGTAGTCTCACTTCTCTTACAACGAAACGAAAAAAGGTCGATTTTTCTATCTCCTCTAAGGAGAGAAAAGAGAAGCTTGGTGAACGAATTAACGCATTGCAGCAGCTTGTTTCTCCATATGGAAAGACGGATACAGCTTCTGTTCTTCTCGAAGCTATGGAATACATTCAGTTTCTCCACGATCAAGTTAAGGTTTTGAGTGCTCCATACCTTCAAAGTTCGCCAATGGCAAAGAATAATATTCAGGAACTGGAGCTCTGTAGCTTGAGAAGTAGGGGTTTGTGCATTGTTCCAATTTCTTGCACTGTCGGAGTTGCTCGAAGCAATGGTGCAGACATCTGGGCTCCAGCCAAGTCAACTTCGCCGAAATTTGACAAGTCGATCTCGCAATTCCAATGA | 507 | 43.39 | MIVSSICNAGARLSGEEVMEIGKMMEHKRCPYSADESSLTSLTTKRKKVDFSISSKERKEKLGERINALQQLVSPYGKTDTASVLLEAMEYIQFLHDQVKVLSAPYLQSSPMAKNNIQELELCSLRSRGLCIVPISCTVGVARSNGADIWAPAKSTSPKFDKSISQFQ | 168 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 6409167 | 6412220 | - | Bda001451.1 | Bda13g00540 | 18671 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda13g00540 | 168 | CDD | bHLH_AtbHLH_like | 52 | 103 | IPR045239 | - | |
Bda13g00540 | 168 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 45 | 110 | IPR036638 | GO:0046983 | |
Bda13g00540 | 168 | PANTHER | TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 | 12 | 152 | - | - | |
Bda13g00540 | 168 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 12 | 152 | - | - | |
Bda13g00540 | 168 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 46 | 95 | IPR011598 | GO:0046983 | |
Bda13g00540 | 168 | Gene3D | - | 43 | 121 | IPR036638 | GO:0046983 | |
Bda13g00540 | 168 | SMART | finulus | 52 | 101 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g00963 | Bda13g00540 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00963 | Bda-Chr3:8714799 | Bda13g00540 | Bda-Chr13:6409167 | 1.89E-38 | dispersed | |
Bda13g00540 | Bda-Chr13:6409167 | Bda15g00841 | Bda-Chr15:12886514 | 1.35E-34 | dispersed | |
Bda13g00540 | Bda-Chr13:6409167 | Bda12g00875 | Bda-Chr12:39446790 | 1.06E-31 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda13g00540 | - | - | zju:107407179 | 248.44 |