Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00576 ATGGTGGATGATGGAATCTCATCAAACCCAGATAATAAAAGAGCTAAAAAAGAGCTAGCTGTTCTTCAAGCAGAGGTGGAACGAATGAGCACAGAGAATCAGCGTTTAAGAGACATGCTAAATCAGGGTACAGTCAACTATCAAGTTTTACAACTGCACTTGGTGAGTTTGCTGCAAAACCAGAAATCTGGTGAAGCTTTTATTAATGGCGGAGGAGTGGGACCCAGGCAGTTTATGGATCTGAGGCTGTCTTCTAATTCTGGTGAGCCTAATCTACCTTTCTCGGAAAAGAGAAGAAGAAACGACGAGAGATCTGCTTCTCCTGGAAATAACGCTGACGTCGGGTCGAAGGATGAAGAAACGAAGAAGCCATTTGGAAGGAAAACCAGGAGAGAAGATAGCCAGGAAGATGAAACGTCTAATGGAGTTTCGAACAAGGCCCCAAGATTTGAATCTACCAGTCTTGTTGATCAAACTGCGGCCACCATGAGAAAGGCTCGAGTTTCAGTTAGAGCTCGATCTGAGGCTCCAATGATCAACGATGGGTGTCAATGGAGAAAATATGGACAGAAAATGGCGAAGGGGAATCCATGTCCTAGAGCTTATTATCGATGTACAATGGCTTCTGCTTGTCCAGTTCGAAAACAAGTTCAAAGATGTTCAGAAGATCGAACAATTCTGACGACCACGTACGAAGGAAATCACAATCACCCTTTACCAGCAGCAGCCATGGCTATGGCGTCAACGACTTCATCGGCAGCTCGAATGCTTCTATCAGGCGCAATGTCATGCTCCGATGGACTGATGAACCCTAATTTGCTCACCAGACCTACTGCTTTCTTTCCTTGTTCCTCTTCAATGGCTACCATTTCAGCCTCAGCTCCGTTCCCCACTGTCACATTAGACCTAACTCAAAAACCTCCAGATCACTTCAACCACAACATCCCATCTCAAATTTTTAGCAATCCACAGTTCAGTTTGAGTCCTCAATTTTTCGGGCAATCTTTAAATAACCAATCGAAATTCTCTGGCCTTCATATCTCGCAAGAAATGTACAATTCTCAACTGGGTCGCCATTTTCAGCAAAATGGGATGGAGAGTTCAGTGGGAGAAAGCTTGAGTGCAGCCACTGTCGCCATTGCTGCAGATCCAAACTTCACGGCTGCATTGGCTGCGGCTATTTCTTCTGTTCTTGGTAACAGCAATGGCAGTCCGAACATCGCTTCTAGCAAGTGCAATAGTCATAGCAACAACTAA 1257 44.87 MVDDGISSNPDNKRAKKELAVLQAEVERMSTENQRLRDMLNQGTVNYQVLQLHLVSLLQNQKSGEAFINGGGVGPRQFMDLRLSSNSGEPNLPFSEKRRRNDERSASPGNNADVGSKDEETKKPFGRKTRREDSQEDETSNGVSNKAPRFESTSLVDQTAATMRKARVSVRARSEAPMINDGCQWRKYGQKMAKGNPCPRAYYRCTMASACPVRKQVQRCSEDRTILTTTYEGNHNHPLPAAAMAMASTTSSAARMLLSGAMSCSDGLMNPNLLTRPTAFFPCSSSMATISASAPFPTVTLDLTQKPPDHFNHNIPSQIFSNPQFSLSPQFFGQSLNNQSKFSGLHISQEMYNSQLGRHFQQNGMESSVGESLSAATVAIAADPNFTAALAAAISSVLGNSNGSPNIASSKCNSHSNN 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6742948 6744499 - Bda001490.1 Bda13g00576 18707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00576 418 MobiDBLite consensus disorder prediction 79 161 - -
Bda13g00576 418 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 413 IPR044810 GO:0003700
Bda13g00576 418 SUPERFAMILY WRKY DNA-binding domain 172 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda13g00576 418 ProSiteProfiles WRKY domain profile. 174 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda13g00576 418 SMART WRKY_cls 179 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda13g00576 418 MobiDBLite consensus disorder prediction 115 139 - -
Bda13g00576 418 Coils Coil 12 39 - -
Bda13g00576 418 MobiDBLite consensus disorder prediction 140 160 - -
Bda13g00576 418 Gene3D WRKY domain 164 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda13g00576 418 PANTHER OS05G0567200 PROTEIN 1 413 - -
Bda13g00576 418 Pfam WRKY DNA -binding domain 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda13g00576 Bda15g00953 CCT
Bda13g00576 Bda15g00953 ECH
Bda06g00373 Bda13g00576 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00576 Bda-Chr13:6742948 Bda15g00953 Bda-Chr15:17560389 2.50E-145 dispersed
Bda13g00576 Bda-Chr13:6742948 Bda06g00373 Bda-Chr6:5944010 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16888 PF03106 WRKY 3.70E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00576 - - pper:18782434 471.085