Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00584 ATGGAACCTCGAGTTTGGCGGGTGCTCTTGCTCTTAAGCTTTGCGTTTTGGGGAGCTGAATCTGACTGTAATCAAAACTGCGATTTAGCTTTAGCTTCCTACTACGTATGGGAGAACTCAAACCTGACATTCATATCCCAAGTTTTGAGCACCACGATCGATTCGATTTTGGATTTCAACAAAGAGTCTATATCGAACAAAGATTTCATTACGTTTGGAAGTAGAGTGAAGGTTCCCTTTCCATGCGGCTGTATAGAGAATAGTTTTCTAGGGCATACATTTTCTTATGTAATCAAGGTCGGAGATTTCTATGATCGGATTGCAGACACCTACTACTCGAGCTTGACGACGACCCAGATGTTGCAGAGGTTCAATAGTTATGATATTAATAATCTTGTTCCTGGTTCTGTACTGAATGTGGTGGTGAATTGCTCTTGTGGGAATTCTTCTGTTTCAGAGGATTTTGGGCTGTTCATCACGTACCCTCTTCGTGGGGATGATAGCTTGGATAAGATATCCGCCCAGATGAATATTAGCTCTACTTTGCTACAATCTTATAACCCGGGAGCCAATTTTTCTGCCGGTGTCGGATTGGTTTTCATTCCGGTAAAAGATGATACTTTGAGCTCATACTTTGCTTTTAAACAAGCAGGACTAGGCGCTGGAGCAATTGCAGGCATAGTCATAGCAGTAGTGGCTGCGGTGCTGTTGTTAGCCATCTGTTTGTGCTTCGGATTTTATCGACGGAAGAAGATAAAACATTCGAGATTGCCGACAGCATCTCAAGAACTAACCCCTCACGTTCTTGTTTCGAGTTCAGGTCCTGCAACTGCTGAGTATAAATCGACAGAAGAAATTCGTGATGGGACTGGTCAGGCTCCTCTCTGTATCGGCATTATGGATAAATCGATGGAATTCTCCTACGAAGAACTTGCCAGTGCTACGAATTATTTCAATTTGGCTAATAAGATCGGGGAAGGCGGTTTCGGATCTGTGTATTATGCAGAGCTGAGAGGCGAGAAAGCCGCGATCAAGAAGATGGATATGCAGGCGACGAAAGAATTTCTCGCAGAGCTACAAGTTCTAACTCGTGTTCATCATTTGAACTTGGTGCGGCTCATAGGATATTGCGCGGAGGGTTCTCTTTTTCTGGTTTATGAATTCATCGAAAACGGGAACTTAAGCCAGCATTTACGAGGCTTAGGGAGAGATGTATTGCCTTGGTCTAAAAGGGTTCAAATAGCCCTTGATTCTGCTAGAGGACTTGAATATATTCACGAACATACAGATCGGGTTTATATCCATCGCGATATCAAATCAGCGAATATTTTGATCGACAAGAACTTCCGAGCGAAGGTTGCAGATTTCGGATTGACTAAATTGACGGAAGTTGGCAACACAATCCGGACCCAGGTCATGGGCACATTTGGATACATGCCTCCCGAATATGCTCAATACGGCGAAGTGACTCCGAAAATAGATGTATACGCATTTGGTGTCGTGCTTTATGAACTTATTTCTGCAAGGGAAGCCATAATCAAAACAAATCGAGCGAAGGCGGTCAATGAATCCAAGGGCCTAGTGGCATTGTTTGAGGATGTCCTAAACGAGCATGATCCTCGAGAAAATCTTCGAAAACTTGTTGACACGAGGCTGGGAGATAACTATCCGCTCGAATCAGTACTCAAGATGGGTCAGCTTGCTAAAGCCTGTACGAGTGAAAATCCGCAATTACGACCAAGCACGAGATCAATCGTGGTTGCCCTGATGACCCTTTCATCCTCAACTGAGGATTGGGATGTCGGCTCATTCCTTGAAAATCAAGCCCTTGTCAATCTAATGTCTGGAAGGTAG 1854 44.01 MEPRVWRVLLLLSFAFWGAESDCNQNCDLALASYYVWENSNLTFISQVLSTTIDSILDFNKESISNKDFITFGSRVKVPFPCGCIENSFLGHTFSYVIKVGDFYDRIADTYYSSLTTTQMLQRFNSYDINNLVPGSVLNVVVNCSCGNSSVSEDFGLFITYPLRGDDSLDKISAQMNISSTLLQSYNPGANFSAGVGLVFIPVKDDTLSSYFAFKQAGLGAGAIAGIVIAVVAAVLLLAICLCFGFYRRKKIKHSRLPTASQELTPHVLVSSSGPATAEYKSTEEIRDGTGQAPLCIGIMDKSMEFSYEELASATNYFNLANKIGEGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELQVLTRVHHLNLVRLIGYCAEGSLFLVYEFIENGNLSQHLRGLGRDVLPWSKRVQIALDSARGLEYIHEHTDRVYIHRDIKSANILIDKNFRAKVADFGLTKLTEVGNTIRTQVMGTFGYMPPEYAQYGEVTPKIDVYAFGVVLYELISAREAIIKTNRAKAVNESKGLVALFEDVLNEHDPRENLRKLVDTRLGDNYPLESVLKMGQLAKACTSENPQLRPSTRSIVVALMTLSSSTEDWDVGSFLENQALVNLMSGR 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6873767 6877699 - Bda001501.1 Bda13g00584 18715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00584 617 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 617 IPR044812 GO:0019199|GO:0045087
Bda13g00584 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Bda13g00584 617 Pfam LysM domain 96 140 IPR018392 -
Bda13g00584 617 Pfam Protein tyrosine and serine/threonine kinase 319 587 IPR001245 GO:0004672|GO:0006468
Bda13g00584 617 SMART LysM_2 33 79 IPR018392 -
Bda13g00584 617 SMART LysM_2 95 141 IPR018392 -
Bda13g00584 617 SUPERFAMILY Protein kinase-like (PK-like) 300 589 IPR011009 -
Bda13g00584 617 ProSiteProfiles Protein kinase domain profile. 318 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00584 617 SMART serkin_6 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00584 617 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 8 617 - -
Bda13g00584 617 Gene3D Transferase(Phosphotransferase) domain 1 389 607 - -
Bda13g00584 617 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Bda13g00584 617 Gene3D Phosphorylase Kinase; domain 1 303 388 - -
Bda13g00584 617 CDD STKc_IRAK 324 586 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00378 Bda13g00584 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00750 Bda-Chr2:48255552 Bda13g00584 Bda-Chr13:6873767 3.42E-34 dispersed
Bda13g00584 Bda-Chr13:6873767 Bda13g00308 Bda-Chr13:3922451 1.63E-68 dispersed
Bda07g01399 Bda-Chr7:16782635 Bda13g00584 Bda-Chr13:6873767 1.83E-45 transposed
Bda10g00153 Bda-Chr10:4498415 Bda13g00584 Bda-Chr13:6873767 7.63E-10 transposed
Bda14g01210 Bda-Chr14:12070710 Bda13g00584 Bda-Chr13:6873767 4.44E-49 transposed
Bda13g00584 Bda-Chr13:6873767 Bda06g00378 Bda-Chr6:5968442 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70005 PF07714 PK_Tyr_Ser-Thr 7.90E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00584 - K13429 vvi:100255092 757.673