Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00597 ATGGCTACCTCTGCCGTCCAACAGTCCTCCTTCGCCGGCCAGACTGCCCTCAAGCAGTCCAATGAGCTCCTACGCAAGGTTGGTGCCTCCGCCTCTAATGGCGGCCGTATCACCATGCGCCGGACTGTGAAGAGTGCTCCTCAAAGCATTTGGTACGGCCCTGATCGTCCGAAGTACTTGGGACCATTCTCCGAGCAAACTCCGTCGTACCTGACCGGAGAGTTCCCAGGAGACTATGGCTGGGACACCGCTGGTTTGTCGGCAGATCCCGAGACGTTCGCTAAGAATCGGGAGCTGGAAGTGATCCACAGCCGGTGGGCCATGCTTGGTGCTTTGGGTTGCGTCTTCCCGGAGATTCTATCGAAGAACGGCGTGAAGTTCGGCGAGGCAGTCTGGTTCAAAGCCGGATCTCAAATCTTCTCCGAGGGTGGCCTTGACTATCTCGGAAACCCGAATCTGATTCACGCTCAGAGCATTATAGCCATCTGGGCTTCACAGGTTGTCCTAATGGGGTTAATCGAAGGCTACAGAGTCGGCGGAGGGCCTCTCGGCGAAGGGCTCGACCCAATCTACCCAGGTGGATCATTTGATCCCCTCGGTTTGGCCGATGATCCAGAGGCGTTTGCAGAGTTGAAGGTGAAAGAGCTTAAGAACGGAAGACTTGCAATGTTCTCCATGTTTGGATTCTTCGTCCAGGCAATCGTCACCGGAAAAGGTCCGATCGAAAACCTGTCCGACCACCTGGCCGACCCAGTAGCCAATAACGCATGGGCTTACGCCACCAACTTCGTGCCTGGGAAATGA 804 55.85 MATSAVQQSSFAGQTALKQSNELLRKVGASASNGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSIIAIWASQVVLMGLIEGYRVGGGPLGEGLDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFVPGK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6963183 6964069 + Bda001516.1 Bda13g00597 18728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00597 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
Bda13g00597 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Bda13g00597 267 Pfam Chlorophyll A-B binding protein 68 233 IPR022796 -
Bda13g00597 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 267 - -
Bda13g00597 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda13g00597 Bda15g00911 CCT
Bda13g00597 Bda15g00911 ECH
Bda06g00422 Bda13g00597 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00367 Bda-Chr9:4684261 Bda13g00597 Bda-Chr13:6963183 6.01E-125 dispersed
Bda13g00597 Bda-Chr13:6963183 Bda14g01617 Bda-Chr14:40739266 2.41E-154 dispersed
Bda09g00836 Bda-Chr9:18832807 Bda13g00597 Bda-Chr13:6963183 1.47E-26 transposed
Bda09g00903 Bda-Chr9:25323012 Bda13g00597 Bda-Chr13:6963183 1.30E-22 transposed
Bda15g00911 Bda-Chr15:15172748 Bda13g00597 Bda-Chr13:6963183 0 transposed
Bda13g00597 Bda-Chr13:6963183 Bda06g00422 Bda-Chr6:6327486 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00597 K08913 - zju:107416999 520.005