Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00599 GCTGAACAAATGTCTAATAGACGGTATTATCAGCCAATGCAAGAAGTAGATTCCTACTGTTTGACTCAGTATCAAAGTCTAGAGTACCAACTATGCTCGGGTTCTGGGAAAAAAAGGCGACACCTTGAAAGGCAAAATTTTGACAGTTGCTACTCGACTTTGGAATCATCTCAAGCATTTCCATCAAATGTCTCTTTTTCCTCCAATGGAAGCCAAAATTCACTGCAAGACTCTCGCTCAAACCCATTCGATAAGAGTTATTCTCTGGAAAATGCCTATGGCTCTCCAATCAGTGGCTCCTGCATAACTGACGATGTCAATGACTTGAGGCACAAATTAATAGAGTTGGAAAACGTAATGCTTGGCCCTGATTTTGATATAGTCGACAGCCATGACAGTATGGGACAAATTATGGATTCGATATCTCAAGGGGATTTAAGAAAGGTACTCATTTCTTGTGCCAAAGCCGTGTCGGATAATAATTCATTAGTAGCTCAGTGGTTAATGGACGAACTTCGAAAGATGGTGTCGGTTTATGGTGAACCGACGCAAAGGCTAGGTGCATATATGTTAGAGGGGCTGGTTGCTCGACTATCATCCTCTGGTAGTTGTATTTACAATGCTTTGAGGTGTAAAGAGCCTGCTGGAAATGAGCTTCTCTCTTACATGCGTATACTTTACGAAGCCTGCCCCTACTTCAAATTCGGATACTTGTCTGCAAATGGTGCAATTGCAGAAGCCATGAAGGATGAAGACAGAGTTCACATTATAGATTTCCGAATAGCTCAAGGAAATCAATGGATCGCCCTCATTCAAGCCTTTGCTGCTCGTCCTGGTGGACCACCCCACATAAAAATAACAGGCATTGATGACTCAATCTCAGCCTATGCCCGAGGAGGAGGACTTCATATCGTCGGGAATCGGCTTTCTAAGTTAGCCGAGGCATTCCAAGTACCATTTGAATTTTGCTCTGCAGCCACATCTGGTACGGAGGTTCATCTCGAAAATCTGGGGATTCAACCCGGAGAGGCCATTGCGGTGAATTTTGCTTTTATACTTCATCACATGCCTGATGAGAGTGTAAGCACTGAAAATCATAGAGATAGGCTCTTAAGGCTGGTCAAGAGTCTATCTCCAAAAGTAGTGACCCTTGTTGAGCAAGAATCTAACACAAATACTGCAAATTTCTACTCCCGATTCGTCGAGGCTCTCGATTATTACAATACTATGTTCGAGTCTATCGATGCTACTCTTCCGCGGGACCACAAGGAGAGAATCAACGTAGAGCAACACTGCCTGGCGAGGGAAGTGGTTAACATAATAGCGTGTGAGGGGGTGGAGAGAGTTGAGGCTAAGAAAGCAGTCCCTAGGGAAGACCAAAGTATGATGAGTAGAACTAGTGGTAGCATCCAAGGTTCTCCGGGCCCAAGCCGAAGTTCAGTTGGAAGCTATGGTCCTAGAATGGATGGTAGATTTAGCCCCATTTCTGCAGGTCGTAGTTCCTTTCCTCCATTTGGGTCAAATTATGGGATGAGTGTGAATTTCGAGCAAGGATTGAACCCCAGTTTTGGTGGAAATACTAATTTTAATAGTAATCTCGGCTATGGACGAGGATTGAATCCTTATTATATTAATAATTCAAATAGGTTTGGTAATCCTGTTGGATATGATGGTAGCAATGGAGGAAGTTCATCTTTTTTCAGCTCAGCGTCAAGAAATTTGTGGGGAGACTTCGCTAGTTCGAGTGCATATATCAGATCTGGAAGTGCGAGTATTGGGGGGACCACATTTGCCAATCCGGCGGTCAGTTGGGATTCTTCGGCATTATCAGCTCAAGGTGGAGGGCAAAATGCCTTGAACAACGTTAGGAATCTGGGCTATGGAGGTCTGGAACATAGTTATGGCTTAGGAGCTGGAGGGTATGGAAGGAACACTGGTATGAATGTACCACGATCATCATCATCAAATGCTTCTTCAGATGTCTCAGCTAGAAGTCCTCCTGGCTATGTGGGAGGTTATAGTGTTAATAAGAGACAGTCAAACAGAGGTTAG 2052 44.01 AEQMSNRRYYQPMQEVDSYCLTQYQSLEYQLCSGSGKKRRHLERQNFDSCYSTLESSQAFPSNVSFSSNGSQNSLQDSRSNPFDKSYSLENAYGSPISGSCITDDVNDLRHKLIELENVMLGPDFDIVDSHDSMGQIMDSISQGDLRKVLISCAKAVSDNNSLVAQWLMDELRKMVSVYGEPTQRLGAYMLEGLVARLSSSGSCIYNALRCKEPAGNELLSYMRILYEACPYFKFGYLSANGAIAEAMKDEDRVHIIDFRIAQGNQWIALIQAFAARPGGPPHIKITGIDDSISAYARGGGLHIVGNRLSKLAEAFQVPFEFCSAATSGTEVHLENLGIQPGEAIAVNFAFILHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTANFYSRFVEALDYYNTMFESIDATLPRDHKERINVEQHCLAREVVNIIACEGVERVEAKKAVPREDQSMMSRTSGSIQGSPGPSRSSVGSYGPRMDGRFSPISAGRSSFPPFGSNYGMSVNFEQGLNPSFGGNTNFNSNLGYGRGLNPYYINNSNRFGNPVGYDGSNGGSSSFFSSASRNLWGDFASSSAYIRSGSASIGGTTFANPAVSWDSSALSAQGGGQNALNNVRNLGYGGLEHSYGLGAGGYGRNTGMNVPRSSSSNASSDVSARSPPGYVGGYSVNKRQSNRG 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6981834 6986417 + Bda001518.1 Bda13g00599 18730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00599 683 MobiDBLite consensus disorder prediction 454 486 - -
Bda13g00599 683 ProSiteProfiles GRAS family profile. 137 520 IPR005202 -
Bda13g00599 683 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 452 IPR005202 -
Bda13g00599 683 Pfam GRAS domain family 146 455 IPR005202 -
Bda13g00599 683 MobiDBLite consensus disorder prediction 63 82 - -
Bda13g00599 683 MobiDBLite consensus disorder prediction 647 663 - -
Bda13g00599 683 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 12 452 - -
Bda13g00599 683 MobiDBLite consensus disorder prediction 647 683 - -
Bda13g00599 683 MobiDBLite consensus disorder prediction 460 480 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00409 Bda13g00599 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00599 Bda-Chr13:6981834 Bda14g00135 Bda-Chr14:943576 5.37E-61 dispersed
Bda14g00679 Bda-Chr14:5080148 Bda13g00599 Bda-Chr13:6981834 3.72E-26 dispersed
Bda06g00409 Bda-Chr6:6245748 Bda13g00599 Bda-Chr13:6981834 0 transposed
Bda09g01581 Bda-Chr9:47274577 Bda13g00599 Bda-Chr13:6981834 4.81E-172 transposed
Bda12g00952 Bda-Chr12:40595240 Bda13g00599 Bda-Chr13:6981834 9.96E-113 transposed
Bda13g00599 Bda-Chr13:6981834 Bda06g00407 Bda-Chr6:6237164 4.71E-10 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16891 PF03514 GRAS 1.00E-109 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00599 - - csv:101221914 649.818