Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00601 ATGCTTGGCAATGGCAGGTGCGAGTCGATGTGCATAGATGGGACAAATCGGCTCTGCCACATCTGGGGAAAGATGCACAAGAAGGTTTGGATTGCAGCCGGTGATATCATCCTCGTCGGTCTTCGTGATTATCAGGACGATAAAGCAGATGTGATCCTCAAATACATGCCCGACGAGGCCAGGCTTTTGAAGGCGTATGGTGAGCTTCCCGATAATACTCGTCTCAATGAGGGTATTGCTGGTGGAATCGATGATGAAGATGATGCTGGAGGTGAAGATTACATCGAGTTTGAAGATGAAGATATCGATGAGATCTAA 318 47.48 MLGNGRCESMCIDGTNRLCHIWGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNTRLNEGIAGGIDDEDDAGGEDYIEFEDEDIDEI 105
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7022173 7022490 - Bda001520.1 Bda13g00601 18732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00601 105 Gene3D - 1 105 IPR012340 -
Bda13g00601 105 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE 1 105 - -
Bda13g00601 105 SUPERFAMILY Nucleic acid-binding proteins 1 104 IPR012340 -
Bda13g00601 105 Pfam Translation initiation factor 1A / IF-1 1 53 IPR006196 GO:0003723|GO:0003743|GO:0006413
Bda13g00601 105 ProSitePatterns Eukaryotic initiation factor 1A signature. 1 23 IPR018104 GO:0003743|GO:0006413
Bda13g00601 105 PANTHER EIF-1A 1 105 IPR001253 GO:0003743|GO:0006413
Bda13g00601 105 SMART eIF1neu4 1 70 IPR001253 GO:0003743|GO:0006413
Bda13g00601 105 ProSiteProfiles S1 domain IF1 type profile. 1 56 IPR006196 GO:0003723|GO:0003743|GO:0006413
Bda13g00601 105 CDD S1_IF1A 1 69 IPR001253 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00601 Bda-Chr13:7022173 Bda15g00969 Bda-Chr15:17870565 9.79E-60 dispersed
Bda13g00601 Bda-Chr13:7022173 Bda06g00397 Bda-Chr6:6177240 5.91E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00601 K03236 - fve:101293411 164.466