Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00620 ATGTTTCAGCCAAATATGATGGAAGCTCAGCTCCATCCATTAGACATGATGCAGAACACATCAGAAAGCGAGCTTGTGCGGCTTAGAGACGACGACTTCGACAGCGCCACTAAATCCGGCAGTGAAAACCATGAGGCTATCTCCGGCGACGAACAAGCTCCGGGCAAGAAAAGGAAGCGTTACCACCGCCATACCCAACATCAGATCCAAGAAATGGAAGCTTTCTTCAAGGAATGTCCTCACCCAGATGATAAACAGAGAAAAGAACTGAGTAGAGAATTAGGGTTAGAGCCATTACAAATCAAATTTTGGTTCCAAAACAAACGCACTCAAATGAAGAACCAGCATGAGCGCCATGAAAACTCGCAGCTTCGATCAGAAAACGAAAAGCTTCGAGCAGATAACATAAGGTACAGAGAGGCTCTTGGCAATGCCTCCTGTCCTAACTGTGGAGGCCCTACGGCTATTGGAGAGATGTCTTTTGACGAACACCATTTGAGACTTGAAAATGCTCGTCTCCGAGAAGAGATTGATCGAATTTCAGCCATTGCTGCAAAATATGTTGGAAAGCCGGTTTTGAACTACCCTCTTATACCTTCCACAGTTCCTCGTCCCCTCGAACTTGGCATGGGAAACTTCGGTGGCCCACCGGGTATTGGCGGCGACGTGTTTGGAAGTGCTGGAGACCTTCTACGGTCGATCAGTGCTCCAACTGAGGCTGATAAACCGATAATTATTGAGCTTGCAGTAGCAGCAATGGAGGAACTTATGAGAATGGCTCAGATGGGAGAGCCCTTGTGGCTGACAACTCTTGATGGATCAAACTCTATGCTCAGTGAAGATGAATATATGAGAACATTTCCCAGAGGGATAGGGCCTACACCTTCTGGACTTAAATGTGAAGCTTCTCGTGCAACTGCAGTGGTCATCATGAACCACATTAACCTTGTTGAGATACTAATGGATGTGAATCAATGGTCAACTGTATTCTCTGGAATCATCTCAAGAGCGATGACCCTGGAAGTGCTGTCAACTGGAGTTGCAGGAAATTATAATGGAGCTTTGCAAGTGATGACATCAGAATTTCAAGTCCCGTCTCCACTGGTTCCTACTAGAGAGAGTTATTACGTCAGATACTGTAAACAGCATGGCGATGGAACTTGGGCGGTGGTGGATGTTTCGTTAGACAATTTACGGCCAAGTCCGGCAATGAGATGCCGGCGAAGACCATCAGGGTGTTGGATCCAAGAAATGCCCAATGGTTATTCTAAGGTAACTTGGATTGAACATGTGGAAGTGGATGATAGCGGTGTCCATAATCTTTACAAGCAGCTAGTGAGCTCCGGTCATGCTTTCGGAGCAAAACGATGGGTTGCGACCCTGGATCGTCAATGTGAACGCCTGGCAAGTGCTATGGCCACCGGAATTCCCACAGGAGATGTTGGAGTGATAACGAATCAAGAAGGAAGAAAGAGTATGTTGAAGTTAGCAGAGAGAATGGTGATTAGCTTTTGCGCTGGAGTGAGTGCTTCGACAACCCACACGTGGACGACACTGTCGGGAACTGGAGCAGATGATGTGAGGGTGATGACTCGTAAGAGCATCGACGATCCTGGTAGACCTCCTGGGATTGTTCTAAGTGCTGCTACATCCTTTTGGCTTCCAGCTCACCCCAAGAGAGTTTTCGACTTCCTACGTGACGAAAATTCTCGCAGCCAGCTGGATTTTATTTGTACGCAGTGGGACATTCTTTCGAACGGCGGAATTGTTCAAGAAATGGCTCACATCGCCAATGGCAGGGACACCGGAAACTGTGTATCTTTGCTGCGGGTAAATAGTGCAAATTCAAGCCAGAGCAACATGCTGATTCTACAAGAGAGTTGCACTGATCCGACCGGTTCTTTCGTAATTTATGCTCCGGTCGACATTGTGGCCATGAATGTGGTGTTGAACGGAGGAGATCCAGACTATGTTGCTCTTCTTCCTTCCGGGTTTGCTATTCTTCCTGATGGAACTTCAACTCAAAGTGCCGCCATTGGAGAAGTTTCCTCTGGTGGTTCTCTTCTAACAGTTGCTTTCCAGATCTTGGTCGATTCCGTTCCGACTGCGAAACTCTCTCTCGGGTCAGTTGCCACTGTCAACAATCTCATCGCCTGCACCGTCGAAAGAATCAAAGCGTCGTTATCATGTGAAGATGCATGA 2202 47.32 MFQPNMMEAQLHPLDMMQNTSESELVRLRDDDFDSATKSGSENHEAISGDEQAPGKKRKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMKNQHERHENSQLRSENEKLRADNIRYREALGNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVLNYPLIPSTVPRPLELGMGNFGGPPGIGGDVFGSAGDLLRSISAPTEADKPIIIELAVAAMEELMRMAQMGEPLWLTTLDGSNSMLSEDEYMRTFPRGIGPTPSGLKCEASRATAVVIMNHINLVEILMDVNQWSTVFSGIISRAMTLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESYYVRYCKQHGDGTWAVVDVSLDNLRPSPAMRCRRRPSGCWIQEMPNGYSKVTWIEHVEVDDSGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATGIPTGDVGVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPAHPKRVFDFLRDENSRSQLDFICTQWDILSNGGIVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSTQSAAIGEVSSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEDA 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7230664 7233930 - Bda001538.1 Bda13g00620 18751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00620 733 Pfam START domain 248 467 IPR002913 GO:0008289
Bda13g00620 733 ProSiteProfiles START domain profile. 238 470 IPR002913 GO:0008289
Bda13g00620 733 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 14 730 - -
Bda13g00620 733 SUPERFAMILY Bet v1-like 238 469 - -
Bda13g00620 733 SMART HOX_1 56 119 IPR001356 GO:0003677
Bda13g00620 733 Coils Coil 114 141 - -
Bda13g00620 733 CDD homeodomain 57 116 IPR001356 GO:0003677
Bda13g00620 733 Pfam Homeodomain 58 114 IPR001356 GO:0003677
Bda13g00620 733 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Bda13g00620 733 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Bda13g00620 733 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 14 730 IPR042160 -
Bda13g00620 733 SMART START_1 247 467 IPR002913 GO:0008289
Bda13g00620 733 SUPERFAMILY Homeodomain-like 47 115 IPR009057 -
Bda13g00620 733 CDD START_ArGLABRA2_like 242 466 - -
Bda13g00620 733 SUPERFAMILY Bet v1-like 486 725 - -
Bda13g00620 733 Gene3D - 44 132 - -
Bda13g00620 733 Gene3D - 277 464 IPR023393 -
Bda13g00620 733 MobiDBLite consensus disorder prediction 33 66 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda13g00620 Bda14g00713 CCT
Bda13g00620 Bda14g00713 ECH
Bda06g00361 Bda13g00620 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00333 Bda-Chr13:4230213 Bda13g00620 Bda-Chr13:7230664 0 dispersed
Bda13g00620 Bda-Chr13:7230664 Bda14g00735 Bda-Chr14:5609503 0 dispersed
Bda06g00850 Bda-Chr6:11749222 Bda13g00620 Bda-Chr13:7230664 2.39E-168 transposed
Bda09g01621 Bda-Chr9:47661971 Bda13g00620 Bda-Chr13:7230664 0 transposed
Bda13g00620 Bda-Chr13:7230664 Bda14g00713 Bda-Chr14:5378449 0 wgd
Bda13g00620 Bda-Chr13:7230664 Bda06g00361 Bda-Chr6:5812678 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16895 PF01852 START 3.20E-59 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00620 K09338 - cit:102613029 1277.31