Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00644 ATGAGAGGCTCTTCCTTTTACCAGACAGCCTCCAATCTCTTCCATAATCACCCTTCCATCTCCAAGCTTCTTGTCGTTGTCACTCTCAGTGGCGGAGGAATAGCAGCGGCGACTGCTGACAATAACAGCAGAGTATTTCAGGCTGCATATGCAGATTCTGGGGAAGATAGCTTCAGGAAGAAGAAGGTGGTGGTGATTGGAACAGGATGGGCGGGAACCAGTTTCCTTAAAAACTTGAAAAGCTCTTCCTATGACGTCCATGTTATCTCCCCTCATAACTACTTTGCATTCACGCCATTATTACCCAGCGTCACTTGCGGCACCGTCGAAGCTCGAAGCATCGTCGAACCGATTCGAAGCATCACTCGAAAGAAAGGTTTGGATATTCAATTCAGAGAAGCTACGTGTTACAAGATCGACAACGGTGGGAAAAAAGTGTATTGTCGATCTAGCCATGATACGAATTTGGGTGGAAAAGAAGAGTTTTCGATAGACTATGATTACTTGATAATAGCAATGGGAGCTAGATCAAACACTTTCAACACACCTGGAGTGGAGGAACACACCCATTTCTTGAAGGATGTAGAAGATGCTCAGAGAATTCGTCAGAACGTGATAGACTGTTTCGAGAAGGCGAATCTTCCTAATTTGAGCGAAGAAGAGAAGAAGAGAACTCTGCATTTTGTAGTCGTCGGAGGTGGTCCGACCGGAGTTGAATTTGCAGCAGAGCTTTATGACTTTGTAAAGGAAGACTTATCCAAGCTTTATCCATCTGTGAAAGACTACGTCAAAATCACCCTCCTTGAGGCCGGAGATCATATATTAAACATGTTTGACAAGAGAATAACAGCTTTTGCTGAAGAAAAATTCCAGAGAGATGGGATTAATGTGAAGACAGGATCTATGGTGGTGAAGGTTTCTGATAAAGAAATCATCACCAAAGAGAGAGCTACCGGCGAATCTAAATCTCTGCCTTATGGAATGGTCGTCTGGTCTACCGGCATTGGCCCTCGCCCTGAAATAGTCGATTTCATGAAGCAGATCGGCCAGACGAGCAGGCGAGCTTTAGCGACGGACGAATGGCTGAGAGTCGAAGGCTGCGACAGCGTCTATGCTTTAGGCGACTGTGCCACCATAAACCAGCGCAGAGTCATGGAAGATATAGCGATTATATTCAAAAAAGCAGATAAGAACAACCCTGGGACTTTGAATCTGAAAGACTTTCAGGAAGTGGTTGATGATATCTGTGAGAGATACCCACAGGTGGAGCTTTACTTGAAGAAGCAACGAATGAAAAATTTTGCAGCTTTGCTTAAGAAATCTCAAGCAGAGGCGCAGAAACAACACCCAGAATTGAATATTGAAGTGTTCAAATCAGCTCTTTCTGAAGTGGATTCTCAGATGAAGAACCTTCCGGCCACTGCTCAGGTAGCTGCTCAACAAGGTGAGTATCTTGCAAGCTGCTTCAATCGCATGGAGGAATGTGAGAAATACCCAGAAGGTCCTCTCAGATTCAGAGGAACAGGGCGTCACCGGTTTCATCCTTTCAGGTACAGACATTTCGGGCAATTTGCTCCTCTCGGAGGAGAGCAAACTGCGGCTCAACTTCCCGGAGACTGGGTTTCGATCGGTCACAGTACCCAGTGGCTTGAAAAGTTGCAATCTTTCTCCAGCAAGCTAGTCAGCTGGCGCACAAGAGTGTTGGTGGTGTCGGATTGGGGAAGAAGGTTCATTTTCGGAAGGGATTCGAGTCGTATCTGA 1761 45.83 MRGSSFYQTASNLFHNHPSISKLLVVVTLSGGGIAAATADNNSRVFQAAYADSGEDSFRKKKVVVIGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRSITRKKGLDIQFREATCYKIDNGGKKVYCRSSHDTNLGGKEEFSIDYDYLIIAMGARSNTFNTPGVEEHTHFLKDVEDAQRIRQNVIDCFEKANLPNLSEEEKKRTLHFVVVGGGPTGVEFAAELYDFVKEDLSKLYPSVKDYVKITLLEAGDHILNMFDKRITAFAEEKFQRDGINVKTGSMVVKVSDKEIITKERATGESKSLPYGMVVWSTGIGPRPEIVDFMKQIGQTSRRALATDEWLRVEGCDSVYALGDCATINQRRVMEDIAIIFKKADKNNPGTLNLKDFQEVVDDICERYPQVELYLKKQRMKNFAALLKKSQAEAQKQHPELNIEVFKSALSEVDSQMKNLPATAQVAAQQGEYLASCFNRMEECEKYPEGPLRFRGTGRHRFHPFRYRHFGQFAPLGGEQTAAQLPGDWVSIGHSTQWLEKLQSFSSKLVSWRTRVLVVSDWGRRFIFGRDSSRI 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7416844 7419437 - Bda001566.1 Bda13g00644 18775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00644 586 SUPERFAMILY EF-hand 384 454 IPR011992 -
Bda13g00644 586 Gene3D - 53 437 - -
Bda13g00644 586 PRINTS FAD-dependent pyridine nucleotide reductase signature 166 184 - -
Bda13g00644 586 PRINTS FAD-dependent pyridine nucleotide reductase signature 227 245 - -
Bda13g00644 586 PRINTS FAD-dependent pyridine nucleotide reductase signature 63 82 - -
Bda13g00644 586 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 385 IPR023753 GO:0016491
Bda13g00644 586 Gene3D - 459 566 - -
Bda13g00644 586 PANTHER - 2 586 - -
Bda13g00644 586 PANTHER NADH DEHYDROGENASE 2 586 IPR045024 GO:0003954|GO:0006116
Bda13g00644 586 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Bda13g00644 586 SUPERFAMILY FAD/NAD(P)-binding domain 227 380 IPR036188 -
Bda13g00644 586 SUPERFAMILY FAD/NAD(P)-binding domain 60 279 IPR036188 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00327 Bda13g00644 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00415 Bda-Chr4:51749404 Bda13g00644 Bda-Chr13:7416844 1.67E-08 dispersed
Bda13g00644 Bda-Chr13:7416844 Bda04g00421 Bda-Chr4:51865621 2.21E-10 dispersed
Bda01g01745 Bda-Chr1:53567481 Bda13g00644 Bda-Chr13:7416844 0 transposed
Bda01g01793 Bda-Chr1:54132079 Bda13g00644 Bda-Chr13:7416844 0 transposed
Bda02g00861 Bda-Chr2:49054873 Bda13g00644 Bda-Chr13:7416844 1.57E-06 transposed
Bda13g00644 Bda-Chr13:7416844 Bda06g00327 Bda-Chr6:5289863 5.87E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00644 K03885 - csv:101209855 972.615