Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00655 ATGGGGGGTTGTATATCCACCAGTAGCCGTAGTAGTTGCAGTAGCACAAGCAGTGGGGGGAAAGTTTCTTCTTCCTGCTTTGGTTTAGTGGTTTATGATCAAAAGAGAACATTCTCCGATCATGTCGTTTCTCTTTGCCGTTCAACTTCGATGTCGAGCCGAATTGTCAACAACGGAAAAACTTCGACTTCTTGCATTTTCACGCAGCAGGGTCGCAAGGGAATTAACCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGGAGATGTAACATTTTGTGGTGTATTCGATGGTCACGGCCCTCATGGTCATCTCGTTGCTCGCAAAGTGAGAGATGCTTTACCCAAAAAGCTTCTGTCATTCTTGCTTTCTTCCCAATCGAATCAAAAAGGGTCTGGTCGAATCTGTTTCAGCTGGAAAGCGAAGAAAGAAGAAGACCAAGCGATGGAGAAGGATGCCTCTGCAGAAGATAAATTAAATTCTGTAATGAGGGAAGCTTTCCTCAAGGCATACAAATCCATGGATAAGGAGCTAAGATCGCATCCAAATCTTGACTGTTTCTGTAGTGGTAGTACTGCAGTGACTATAATTAAACAGGGCTCGAATCTGTTCATAGGCAATATTGGGGATTCGCGAGCAATTCTCGGATCAAAGGGAAGTGACGATTCCATGGTAGCAATTCAGCTGACTGTTGATCTAAAGCCTGATTTGCCCAGAGAGGCTGAAAGAATAAAACAATGCAATGGTAGAGTTTTTGCGTTGCAGGATGAGCCTGAAGTGCCAAGAGTGTGGCTGCCATTCGACGATGCACCTGGGCTAGCCATGGCTCGTGCATTCGGCGATTTTTGTTTGAAGGAATATGGTGTGATCTCTATACCAGAATTTTCCCACCGAAGACTAACAAACAAAGATCAGTTCATCGTTCTCGCCTCAGATGGGGTATGGGATGTGTTGAGTAACGAGGAGGTGGTGCAGATTGTATCAACTGCTCCTACAAGGTCATCGACTGCAAGAACCCTGGTCGACAAAGCTGCCCATGAATGGAAGCTCAAATACCCAACTTCAAAGATGGATGATTGTGCTGTGGTCTGTCTGTTTCTCGAGGGAAAACTGGACTCTGAATCTGATTATGATGAACAAGGTTCGTCCACAATCCTTCAAAGAGATCATTCTGGCAATGCCACTATTGAATCAGATGGTACTCAGAAAAGTGAGCCGACTTTTCAACGAAACCAAACTGTCCGATCATCAGAAGATGACGAAACCTATGAAAAACTGCCAGTTGATGTTGAAGAACCGGCTGCAGCAGAAGACCAGAATTGGTCAGGTTTGGAAGGCGTGACAAGAGTGAACTCACTAGTTCAACTTCCAAGATTTTATCAAGAAAGGCCCAAGCCTTGA 1404 44.87 MGGCISTSSRSSCSSTSSGGKVSSSCFGLVVYDQKRTFSDHVVSLCRSTSMSSRIVNNGKTSTSCIFTQQGRKGINQDAMIVWEDFMSGDVTFCGVFDGHGPHGHLVARKVRDALPKKLLSFLLSSQSNQKGSGRICFSWKAKKEEDQAMEKDASAEDKLNSVMREAFLKAYKSMDKELRSHPNLDCFCSGSTAVTIIKQGSNLFIGNIGDSRAILGSKGSDDSMVAIQLTVDLKPDLPREAERIKQCNGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRRLTNKDQFIVLASDGVWDVLSNEEVVQIVSTAPTRSSTARTLVDKAAHEWKLKYPTSKMDDCAVVCLFLEGKLDSESDYDEQGSSTILQRDHSGNATIESDGTQKSEPTFQRNQTVRSSEDDETYEKLPVDVEEPAAAEDQNWSGLEGVTRVNSLVQLPRFYQERPKP 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7507597 7509299 - Bda001577.2 Bda13g00655 18786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00655 467 MobiDBLite consensus disorder prediction 415 433 - -
Bda13g00655 467 CDD PP2Cc 69 368 IPR001932 -
Bda13g00655 467 Gene3D - 46 370 IPR036457 -
Bda13g00655 467 MobiDBLite consensus disorder prediction 379 414 - -
Bda13g00655 467 SUPERFAMILY PP2C-like 62 369 IPR036457 -
Bda13g00655 467 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 455 - -
Bda13g00655 467 SMART PP2C_4 53 366 IPR001932 -
Bda13g00655 467 ProSiteProfiles PPM-type phosphatase domain profile. 63 368 IPR001932 -
Bda13g00655 467 Pfam Protein phosphatase 2C 124 343 IPR001932 -
Bda13g00655 467 MobiDBLite consensus disorder prediction 375 445 - -
Bda13g00655 467 MobiDBLite consensus disorder prediction 1 23 - -
Bda13g00655 467 PANTHER ALPHABET, ISOFORM E-RELATED 1 455 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda13g00655 Bda15g00908 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01141 Bda-Chr7:13531687 Bda13g00655 Bda-Chr13:7507597 4.12E-14 dispersed
Bda13g00655 Bda-Chr13:7507597 Bda15g00908 Bda-Chr15:15019722 5.19E-158 dispersed
Bda13g00655 Bda-Chr13:7507597 Bda06g00320 Bda-Chr6:5253823 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00655 - - zju:107416642 691.034