Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda13g00679 ATGGAGGAGTCACAAGATGATGTGGGGACTGGTGAGCAAGGGCCTTCCAATGCTTCATGGTGGCCATCAGATTTCTTGGAGGAGTTTGAATCTGTTAATTTGGATTCTCGTGGAGAGACCTTAAGCTCTAAGGAGCAACTTAGAAGTTCTGAGAAAGATGTGTTATTACCTCAGAAAGCATCTCAAATTCTTTGGCGTACTGGGTTTCTTTCTGACCCAATTCCAAATGGTTTCTATTCTGTCGTTCCGGAGAAAGGGCTTAAGGAGCATTTTAATAGTATTCCAACCCTGGATGAGCTTCTTGCTTTGGAAAGTGAAGGTTTCAAAGCTGATGTTATTCTGGTAGACTCTGAAAAGGATAAAAAGTTGTCTATGCTGAAGCAACTGATTTTGACGCTGGTGAAAGGATTGAGTTCAAATCCCGCTGCAATGATAAAGAAAATTGCTGTATCGGTCGCTGATTTTTATAAACGACCGATTTTGGATAGTCCAGCGAAAGCTACAGCTGAAGATACCTCCCACTTGTTTGACGATCGAGGTATCCAGCTTCTGGGGCAGATAAAACATGGCTCATGCCGTCCACGGGCAATTCTGTTTAAGGTCCTAGCTGATACTGTAGGTCTTGAGAGCCAACTCATGGTGGGTTTGCCAAATGATGGGGCTGTTGGTTGTGTAGATTCATATAAACACATGTCTGTTACAGTCGTGTTGAACTCAGTGGAACTACTGGTTGATCTTATGAGATTTCCTGGTCAGTTATTACCCCGATCTGCAAAGGCGATTTTCATGACCCATATATCTGCGGGAGGGGAAAGTGATTCAGCAGAAAATGATTCCTGTGATTCGCCACTCGAACCAAACAGTCCTTTGTATGGGTTTTCAGACAGAGTTGACCTTGACAGCACTGAAAAAGATGATAATCTTCAGTTCCATAGAAAATTTGAACCATCTTCGAATGTGACTGGTCCTGCCTTGCGCAATATGATGTTGAGATCGGCTACATCTATTGACAGAAAGTTGAGTTTATCGCATAGTGAACCTAACATTGCAACTCCATTTTGGCGGCGAAATCGGAGAAAGGTCATTGCAGAGCAACGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGAGGACGGTCCATGCTTAGTGGTGATAGGAAAGCATTCAGAGATTTTTCTGATGATGTATCTACATCAAGTTACAGATCAGATGGTGCATCAACTTCAGAGGCTCGGCGAATTAGGAGGAGGAGCATTAGTATTACTCCAGAGATTGGTGATGACATCGTAAGGGCCGTGAAGGCAATGAATGAAACATTGAAGCAAAATCGTCTTTTGAGAGAACGAGCCGATGATAGGTCCTTTTCCAATTCTCCAATTGCTGGAAACAATCGACCAGATGCACAGAGAAATGGTGAAGTAGGCTCGCAAAGAGCAATTTCCTTACCATCATCTCCACATGAATACAGGAGTCAAATATCTGGAAGGAGTGGACCTTTAGAGTTCATCGTGAATGATGCATTGGTCTCAACCTGGACGAAGGTTCTCGAATCTTCCTCCTTGAATGACAAATCTCTATTAGCTTATCCAGAATGGAATATTGATTTCTCAGAGCTGACAGTTGGAATTCGCGTTGGAATTGGATTCTTTGGAGAGGTATTCCGTGGCATATGGAATGGAACTGATGTTGCAATCAAGGTTTTCCTGGAGCAAGATCTAACCGTTGAAAACATGGAAGATTTTTGCAACGAGATATCCATTCTCAGCCGTCTTCGACATCCTAATGTTATTTTATTTCTTGGTGCATGCACTAAACCTCCAAGCTTATCAATGGTAACTGAATATATGGAGATGGGATCCTTGTACTCTTTAATCCATCTGAGTGGTCAGAAGAAAAAGCTTAGCTGGCGAAGAAGACTGAAAATGCTCCGCGACATATGCAGGGGGTTGATGTGCATCCACCGAATGAAGATAGTTCATCGTGATCTGAAAAGTGCCAATTGTCTTGTTAATAAGCACTTGACTGTCAAGATCTGTGATTTTGGGCTCTCAAAAATGATCTCAGAAATACCTGTGACTGGCTCTCCATCTGCTGGAACCCCGGAGTGGATGGCTCCTGAGCTCTTTCGAAATGAACCATTCACTGAAAAATGTGATATTTTCAGCCTGGGAGTGATTATGTGGGAACTCTGCACTCTCAGTAGACCTTGGGAGGGTGTACCTCCAGAGAGGGTTGTTTATGCTGTTGGTTCTGAGGGATCCCGGCTAGATATTCCAGAAGGCCCTCTTGGCCGACTGATATCAGATTGTTGGGGGGAGCCGCATGAGAGACCCAGCTGTGAGGAAATATTTTCGCGCCTACTTGATTGCGAGTATTCACTTAGCTGA 2397 43.76 MEESQDDVGTGEQGPSNASWWPSDFLEEFESVNLDSRGETLSSKEQLRSSEKDVLLPQKASQILWRTGFLSDPIPNGFYSVVPEKGLKEHFNSIPTLDELLALESEGFKADVILVDSEKDKKLSMLKQLILTLVKGLSSNPAAMIKKIAVSVADFYKRPILDSPAKATAEDTSHLFDDRGIQLLGQIKHGSCRPRAILFKVLADTVGLESQLMVGLPNDGAVGCVDSYKHMSVTVVLNSVELLVDLMRFPGQLLPRSAKAIFMTHISAGGESDSAENDSCDSPLEPNSPLYGFSDRVDLDSTEKDDNLQFHRKFEPSSNVTGPALRNMMLRSATSIDRKLSLSHSEPNIATPFWRRNRRKVIAEQRTASSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTSSYRSDGASTSEARRIRRRSISITPEIGDDIVRAVKAMNETLKQNRLLRERADDRSFSNSPIAGNNRPDAQRNGEVGSQRAISLPSSPHEYRSQISGRSGPLEFIVNDALVSTWTKVLESSSLNDKSLLAYPEWNIDFSELTVGIRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTVENMEDFCNEISILSRLRHPNVILFLGACTKPPSLSMVTEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHLTVKICDFGLSKMISEIPVTGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYAVGSEGSRLDIPEGPLGRLISDCWGEPHERPSCEEIFSRLLDCEYSLS 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7710190 7724818 + Bda001603.1 Bda13g00679 18810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda13g00679 798 MobiDBLite consensus disorder prediction 459 495 - -
Bda13g00679 798 MobiDBLite consensus disorder prediction 447 497 - -
Bda13g00679 798 PANTHER MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN-RELATED 29 796 - -
Bda13g00679 798 SMART serkin_6 542 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00679 798 Pfam Protein tyrosine and serine/threonine kinase 544 790 IPR001245 GO:0004672|GO:0006468
Bda13g00679 798 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Bda13g00679 798 MobiDBLite consensus disorder prediction 1 22 - -
Bda13g00679 798 SUPERFAMILY Protein kinase-like (PK-like) 519 789 IPR011009 -
Bda13g00679 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Bda13g00679 798 MobiDBLite consensus disorder prediction 363 385 - -
Bda13g00679 798 ProSiteProfiles Protein kinase domain profile. 542 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda13g00679 798 ProSitePatterns Protein kinases ATP-binding region signature. 548 569 IPR017441 GO:0005524
Bda13g00679 798 Gene3D Transferase(Phosphotransferase) domain 1 621 797 - -
Bda13g00679 798 CDD STKc_MAP3K-like 548 790 - -
Bda13g00679 798 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 29 796 - -
Bda13g00679 798 Gene3D Phosphorylase Kinase; domain 1 535 620 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g00679 Bda-Chr13:7710190 Bda06g00467 Bda-Chr6:6719315 2.75E-55 dispersed
Bda13g00679 Bda-Chr13:7710190 Bda11g01805 Bda-Chr11:53078072 5.20E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70010 PF07714 PK_Tyr_Ser-Thr 2.90E-59 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda13g00679 - - cmo:103490492 1292.33